| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735089
Identifier: 187735089
GI number: 187735089
Start: 684180
End: 684749
Strand: Direct
Name: 187735089
Synonym: Amuc_0583
Alternate gene names: NA
Gene position: 684180-684749 (Clockwise)
Preceding gene: 187735087
Following gene: 187735091
Centisome position: 25.68
GC content: 52.28
Gene sequence:
>570_bases ATGGAAATAAGCAACCTTCTTCCCATCACTACACGGAAGGAATTAAGAATATGGCTGGAAAACAACCACCTCACTTCCTC CTGCTGCTGGGTTCTCACAACGAGGAAACCTTCCCCACATGCCCTCCTTTACCTGGATGCCGTGGAGGAAGCCCTGTGCT TCGGATGGATTGACAGCACCCGCAAGAAGACGGCCTCCGGTTTCCTGGCCCAGCGTCTCACTCCCCGATCCAGAAAGAGT AAATGGTCCGAACTGAACAAGGAACGCGTCCGCCGCCTGGCCAGGCTGGGACTAATGACGCCCCACGGCGAAAAATGTCT GCCGGAAATGAATCCGGAAGCGTTCCGTATTGACCCATATATTTTACAGCTCCTTCAACAGGATCCGCTTATTTACGCCA ATTTTCTGGCGTTTCCCCGGCTATACCGCCATGTGCGCCTGGATACCATTCAAATTAAAAAAAACCAGCCGGAACTGTTC CGCAAGCGCCTGGAAAAATTTCTGGAGAATACCCGTGAAAACAGGATGTACGGAGAATGGCACGACGGAGGACGGCTGCT GGAAAAGTAG
Upstream 100 bases:
>100_bases GCTGTCCCCGGTTAGAAGCCATGTCTGTGCTGGAAATGCAGGCTCCGGAGAAGTATTATCGGCCCTCAGAACATCAGCGG AAGACCGACCTATAAACGCC
Downstream 100 bases:
>100_bases ACGCCAAGCTCCCGCCATTTCCCTGCCGGACGAGCCCTGACGTTACCAGGCCGCTCTGGAGTTGTTCCGGAACGGCTCTG GAGGGTCAGGAGGAAGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MEISNLLPITTRKELRIWLENNHLTSSCCWVLTTRKPSPHALLYLDAVEEALCFGWIDSTRKKTASGFLAQRLTPRSRKS KWSELNKERVRRLARLGLMTPHGEKCLPEMNPEAFRIDPYILQLLQQDPLIYANFLAFPRLYRHVRLDTIQIKKNQPELF RKRLEKFLENTRENRMYGEWHDGGRLLEK
Sequences:
>Translated_189_residues MEISNLLPITTRKELRIWLENNHLTSSCCWVLTTRKPSPHALLYLDAVEEALCFGWIDSTRKKTASGFLAQRLTPRSRKS KWSELNKERVRRLARLGLMTPHGEKCLPEMNPEAFRIDPYILQLLQQDPLIYANFLAFPRLYRHVRLDTIQIKKNQPELF RKRLEKFLENTRENRMYGEWHDGGRLLEK >Mature_189_residues MEISNLLPITTRKELRIWLENNHLTSSCCWVLTTRKPSPHALLYLDAVEEALCFGWIDSTRKKTASGFLAQRLTPRSRKS KWSELNKERVRRLARLGLMTPHGEKCLPEMNPEAFRIDPYILQLLQQDPLIYANFLAFPRLYRHVRLDTIQIKKNQPELF RKRLEKFLENTRENRMYGEWHDGGRLLEK
Specific function: Unknown
COG id: COG4430
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22460; Mature: 22460
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEISNLLPITTRKELRIWLENNHLTSSCCWVLTTRKPSPHALLYLDAVEEALCFGWIDST CCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHH RKKTASGFLAQRLTPRSRKSKWSELNKERVRRLARLGLMTPHGEKCLPEMNPEAFRIDPY HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECHH ILQLLQQDPLIYANFLAFPRLYRHVRLDTIQIKKNQPELFRKRLEKFLENTRENRMYGEW HHHHHHCCCCHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCC HDGGRLLEK CCCCCCCCC >Mature Secondary Structure MEISNLLPITTRKELRIWLENNHLTSSCCWVLTTRKPSPHALLYLDAVEEALCFGWIDST CCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHH RKKTASGFLAQRLTPRSRKSKWSELNKERVRRLARLGLMTPHGEKCLPEMNPEAFRIDPY HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECHH ILQLLQQDPLIYANFLAFPRLYRHVRLDTIQIKKNQPELFRKRLEKFLENTRENRMYGEW HHHHHHCCCCHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCC HDGGRLLEK CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA