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The map label for this gene is ddh [H]

Identifier: 187735087

GI number: 187735087

Start: 682234

End: 683115

Strand: Direct

Name: ddh [H]

Synonym: Amuc_0581

Alternate gene names: 187735087

Gene position: 682234-683115 (Clockwise)

Preceding gene: 187735085

Following gene: 187735089

Centisome position: 25.61

GC content: 60.54

Gene sequence:

>882_bases
ATGATTAAAGTAGCCATCGTAGGATACGGCAACATCGGGAAATACGCTGTGGACGCCTTGCGCGCCGCTCCCGATATGGA
ACTGGCAGGTATCGTGCGCCGCCCCGGCAGCGAAGCTGTACACGGCATCAAGACCGTAAGCGACGTGGAGGAACTGGGCC
ATGTGGACGCGGCCCTGCTCTGCACCCCCACCCGCAGCGTGGAAGAAACGGCTCTGCCCCTGCTCGCCCGCGGCATCAAC
ACAGTTGACAGCTTCGATATTCACGGGGACATCGTGGCCCTGCGCCGTTCCCTGGGAGCCCAGGCAATCAAGCATGACGC
CGTCTCCATCATTTCCGCCGGCTGGGATCCCGGAACGGACTCCGTCATCCGTACCCTGATGCTGGCCATGGCTCCCAAAG
GCATCACGTACACCAACTTCGGCCCCGGCATGAGCATGGGCCACAGCGTCGTGGCGCGTTCCAAGGAAGGAGTGGCGGAC
GCTCTTTCCCTCACCATCCCCACGGGTTCCGGCGTACACCGCCGCATGGTTTATGTGGTGCTGAAAGAAGGAGCCAAATT
CTCCGACGTGGAATTCGCCATTAAATCAGATTCCTATTTCAGCCATGACGACACCCGCGTGCTGCAGGTGCCCGACATCG
ACGTGCTGAAAGACATGGGCCACGGCGTGCTGATGGAACGCAAGGGCGTTTCCGGCTCCACGCAGAACCAGATGTTCACG
TTTGAAATGCGCATCAACAATCCGGCCCTGACCGCCCAGGTCATGGTGGCTTCCGCCCGCGCCAGCATGAAACTGGCCGC
AGGCTGCTATACGCTGCCGGAAATTGCCCCGATGGATTTTCTGCCGGGCGACCGCGAAGAATTGATTGCCCAGCTGGTCT
AA

Upstream 100 bases:

>100_bases
TGCCATGCGTTCCCAAAACACTTAAAAAACATGCGCCAAAGGAAAAAAATGCCGGGTGGACATTCCGCCCCATTAGGAAC
CATTACTATTTACTACCAAG

Downstream 100 bases:

>100_bases
CCCGGAGCATTCCGGACACACGGTACCAGGGGCGCTCCTGCCGCCCCTGTTCCGCGGGCCTTCCTTTATCCTCCGGTTGA
GGACCGGAGGATTTTTATTG

Product: diaminopimelate dehydrogenase

Products: NA

Alternate protein names: Meso-DAP dehydrogenase [H]

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MIKVAIVGYGNIGKYAVDALRAAPDMELAGIVRRPGSEAVHGIKTVSDVEELGHVDAALLCTPTRSVEETALPLLARGIN
TVDSFDIHGDIVALRRSLGAQAIKHDAVSIISAGWDPGTDSVIRTLMLAMAPKGITYTNFGPGMSMGHSVVARSKEGVAD
ALSLTIPTGSGVHRRMVYVVLKEGAKFSDVEFAIKSDSYFSHDDTRVLQVPDIDVLKDMGHGVLMERKGVSGSTQNQMFT
FEMRINNPALTAQVMVASARASMKLAAGCYTLPEIAPMDFLPGDREELIAQLV

Sequences:

>Translated_293_residues
MIKVAIVGYGNIGKYAVDALRAAPDMELAGIVRRPGSEAVHGIKTVSDVEELGHVDAALLCTPTRSVEETALPLLARGIN
TVDSFDIHGDIVALRRSLGAQAIKHDAVSIISAGWDPGTDSVIRTLMLAMAPKGITYTNFGPGMSMGHSVVARSKEGVAD
ALSLTIPTGSGVHRRMVYVVLKEGAKFSDVEFAIKSDSYFSHDDTRVLQVPDIDVLKDMGHGVLMERKGVSGSTQNQMFT
FEMRINNPALTAQVMVASARASMKLAAGCYTLPEIAPMDFLPGDREELIAQLV
>Mature_293_residues
MIKVAIVGYGNIGKYAVDALRAAPDMELAGIVRRPGSEAVHGIKTVSDVEELGHVDAALLCTPTRSVEETALPLLARGIN
TVDSFDIHGDIVALRRSLGAQAIKHDAVSIISAGWDPGTDSVIRTLMLAMAPKGITYTNFGPGMSMGHSVVARSKEGVAD
ALSLTIPTGSGVHRRMVYVVLKEGAKFSDVEFAIKSDSYFSHDDTRVLQVPDIDVLKDMGHGVLMERKGVSGSTQNQMFT
FEMRINNPALTAQVMVASARASMKLAAGCYTLPEIAPMDFLPGDREELIAQLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000846
- InterPro:   IPR010190
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01113 DapB_N [H]

EC number: =1.4.1.16 [H]

Molecular weight: Translated: 31309; Mature: 31309

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKVAIVGYGNIGKYAVDALRAAPDMELAGIVRRPGSEAVHGIKTVSDVEELGHVDAALL
CEEEEEEECCCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEE
CTPTRSVEETALPLLARGINTVDSFDIHGDIVALRRSLGAQAIKHDAVSIISAGWDPGTD
ECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHH
SVIRTLMLAMAPKGITYTNFGPGMSMGHSVVARSKEGVADALSLTIPTGSGVHRRMVYVV
HHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHEEEEE
LKEGAKFSDVEFAIKSDSYFSHDDTRVLQVPDIDVLKDMGHGVLMERKGVSGSTQNQMFT
EECCCCCCCEEEEEECCCEECCCCCEEEECCCHHHHHHCCCCEEEEECCCCCCCCCEEEE
FEMRINNPALTAQVMVASARASMKLAAGCYTLPEIAPMDFLPGDREELIAQLV
EEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MIKVAIVGYGNIGKYAVDALRAAPDMELAGIVRRPGSEAVHGIKTVSDVEELGHVDAALL
CEEEEEEECCCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEE
CTPTRSVEETALPLLARGINTVDSFDIHGDIVALRRSLGAQAIKHDAVSIISAGWDPGTD
ECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHH
SVIRTLMLAMAPKGITYTNFGPGMSMGHSVVARSKEGVADALSLTIPTGSGVHRRMVYVV
HHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHEEEEE
LKEGAKFSDVEFAIKSDSYFSHDDTRVLQVPDIDVLKDMGHGVLMERKGVSGSTQNQMFT
EECCCCCCCEEEEEECCCEECCCCCEEEECCCHHHHHHCCCCEEEEECCCCCCCCCEEEE
FEMRINNPALTAQVMVASARASMKLAAGCYTLPEIAPMDFLPGDREELIAQLV
EEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3588313; 12948626; 8885833; 9521647 [H]