| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735049
Identifier: 187735049
GI number: 187735049
Start: 640225
End: 641346
Strand: Direct
Name: 187735049
Synonym: Amuc_0542
Alternate gene names: NA
Gene position: 640225-641346 (Clockwise)
Preceding gene: 187735048
Following gene: 187735058
Centisome position: 24.03
GC content: 58.2
Gene sequence:
>1122_bases ATGAACAACATTCCCACTTCCCCCAACGACCCCGTCAACACGGACATTCTGCTGGTGGCGGAAGACCGCATCAAAGGGTT CCGCCGCCTGCCCTTCCACGCCATTTCCGAACAATGCGGACATCCTGTTCCGGTGGTTATCCAGCGGCTGAAAGCCATGA TGGAGGCCGGAGTAGTGCGTCGCGTGCGCCAGACGCTGCTGGCGACTAAGCTGGCCCAGGGAGCCCTGGTGGCCTGGTCC CTGCCGGAGGAAAAACTGGATGCCGCTTTTGACTGGATGAAGGAGCTGGACCCTTTTACGGGCCATGTGGTGCTCCGCAA TACGGATGCGGCCAACCCCGGCGCCAACTACAGGCTCTGGACCACGGTCAAGGTGCCCGTGGGGTGCGGTACGCCGGAGG AACACTGCGGCATCCTGAAACGCCATATCGGCGCAGACGGTTATGTTCTGCTGCCGGCACGCGGCGTCTTTGCGCTGGGG GTGGGGCACATGCGCCGCAGGGGACTCAGGCCCGGAGAAAAAACTCCGGAACCGGCTCCCATGCAGGAAACGAAAACCGT ATCTCTTTCAGAACTGGAATGGAAGGTGCTCCTCTCCGTCAAGGAACAGCTCAGGCCTGAGGAAATGGTGGAAGATCCCT GGTCCCTCCGGGCCGCACGGGCAGGATTGGAAACGGAAGAATACTGCCGTACGGCGGAAGAACTGGACCGGAAGCATGTC ATCGGCCGTTTCGCCACTTTTCTGGAACATGTGAGAGCCAAAACGGACGACGGCCCCGTTACCAAATACAACGGACTGTT CCATTGGACGGTTCCCTCCGGCATGGAAATCCGGGCTGGAGCGGAATGCGGGCGCCACATCTGCATGACCCATTGTTATT GGAGAACAGGCGGAGATGTTTTTGGAGGAGCGCAAATCATGGGTGTGGTACACGGATTGGAAAAAGATGCCGTTCTGGAG CACAAAGCGGCGATTGACCGCCATCTGGAGGCTTCCGGCATTCCCATCCTCCACACGGCTGTTTTCTGGGGTGAACGTTC GGAAATCAAGCCTTCCGAGATTTCTCCGGAACTGTATAGGAAATGGATGGAAGAAGTAAAAAAAGCTCCCGTTCTGCAGT AA
Upstream 100 bases:
>100_bases TACGACAACAAACCCCTCTACCAGTCCGGGCAATAGCCTGAAAATCAAATCCGGCTTTCCGGGCCGGGCGATACCCTCGC CCGGCCTTTTTTACGCCGCC
Downstream 100 bases:
>100_bases CTCCCTTCTCCACGCCCGCCTCCGGTGGTCTTCCCCTGGGGTAGAACAGCTTTTCCCTCCGAACTCCCGCGAATGCCGTC ACGAAGGCACAAGCATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: AsnC Family Transcriptional Regulator
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MNNIPTSPNDPVNTDILLVAEDRIKGFRRLPFHAISEQCGHPVPVVIQRLKAMMEAGVVRRVRQTLLATKLAQGALVAWS LPEEKLDAAFDWMKELDPFTGHVVLRNTDAANPGANYRLWTTVKVPVGCGTPEEHCGILKRHIGADGYVLLPARGVFALG VGHMRRRGLRPGEKTPEPAPMQETKTVSLSELEWKVLLSVKEQLRPEEMVEDPWSLRAARAGLETEEYCRTAEELDRKHV IGRFATFLEHVRAKTDDGPVTKYNGLFHWTVPSGMEIRAGAECGRHICMTHCYWRTGGDVFGGAQIMGVVHGLEKDAVLE HKAAIDRHLEASGIPILHTAVFWGERSEIKPSEISPELYRKWMEEVKKAPVLQ
Sequences:
>Translated_373_residues MNNIPTSPNDPVNTDILLVAEDRIKGFRRLPFHAISEQCGHPVPVVIQRLKAMMEAGVVRRVRQTLLATKLAQGALVAWS LPEEKLDAAFDWMKELDPFTGHVVLRNTDAANPGANYRLWTTVKVPVGCGTPEEHCGILKRHIGADGYVLLPARGVFALG VGHMRRRGLRPGEKTPEPAPMQETKTVSLSELEWKVLLSVKEQLRPEEMVEDPWSLRAARAGLETEEYCRTAEELDRKHV IGRFATFLEHVRAKTDDGPVTKYNGLFHWTVPSGMEIRAGAECGRHICMTHCYWRTGGDVFGGAQIMGVVHGLEKDAVLE HKAAIDRHLEASGIPILHTAVFWGERSEIKPSEISPELYRKWMEEVKKAPVLQ >Mature_373_residues MNNIPTSPNDPVNTDILLVAEDRIKGFRRLPFHAISEQCGHPVPVVIQRLKAMMEAGVVRRVRQTLLATKLAQGALVAWS LPEEKLDAAFDWMKELDPFTGHVVLRNTDAANPGANYRLWTTVKVPVGCGTPEEHCGILKRHIGADGYVLLPARGVFALG VGHMRRRGLRPGEKTPEPAPMQETKTVSLSELEWKVLLSVKEQLRPEEMVEDPWSLRAARAGLETEEYCRTAEELDRKHV IGRFATFLEHVRAKTDDGPVTKYNGLFHWTVPSGMEIRAGAECGRHICMTHCYWRTGGDVFGGAQIMGVVHGLEKDAVLE HKAAIDRHLEASGIPILHTAVFWGERSEIKPSEISPELYRKWMEEVKKAPVLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41731; Mature: 41731
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: PS00024 HEMOPEXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNIPTSPNDPVNTDILLVAEDRIKGFRRLPFHAISEQCGHPVPVVIQRLKAMMEAGVVR CCCCCCCCCCCCCCCEEEEECHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RVRQTLLATKLAQGALVAWSLPEEKLDAAFDWMKELDPFTGHVVLRNTDAANPGANYRLW HHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEE TTVKVPVGCGTPEEHCGILKRHIGADGYVLLPARGVFALGVGHMRRRGLRPGEKTPEPAP EEEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCC MQETKTVSLSELEWKVLLSVKEQLRPEEMVEDPWSLRAARAGLETEEYCRTAEELDRKHV CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH IGRFATFLEHVRAKTDDGPVTKYNGLFHWTVPSGMEIRAGAECGRHICMTHCYWRTGGDV HHHHHHHHHHHHCCCCCCCCEEECCEEEEECCCCCEECCCHHHHHHHHHHHEEEECCCCC FGGAQIMGVVHGLEKDAVLEHKAAIDRHLEASGIPILHTAVFWGERSEIKPSEISPELYR CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEHHEEECCCCCCCCCCCCHHHHH KWMEEVKKAPVLQ HHHHHHHHCCCCC >Mature Secondary Structure MNNIPTSPNDPVNTDILLVAEDRIKGFRRLPFHAISEQCGHPVPVVIQRLKAMMEAGVVR CCCCCCCCCCCCCCCEEEEECHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RVRQTLLATKLAQGALVAWSLPEEKLDAAFDWMKELDPFTGHVVLRNTDAANPGANYRLW HHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEE TTVKVPVGCGTPEEHCGILKRHIGADGYVLLPARGVFALGVGHMRRRGLRPGEKTPEPAP EEEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCC MQETKTVSLSELEWKVLLSVKEQLRPEEMVEDPWSLRAARAGLETEEYCRTAEELDRKHV CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH IGRFATFLEHVRAKTDDGPVTKYNGLFHWTVPSGMEIRAGAECGRHICMTHCYWRTGGDV HHHHHHHHHHHHCCCCCCCCEEECCEEEEECCCCCEECCCHHHHHHHHHHHEEEECCCCC FGGAQIMGVVHGLEKDAVLEHKAAIDRHLEASGIPILHTAVFWGERSEIKPSEISPELYR CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEHHEEECCCCCCCCCCCCHHHHH KWMEEVKKAPVLQ HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA