| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is mreB [H]
Identifier: 187735047
GI number: 187735047
Start: 637337
End: 638368
Strand: Direct
Name: mreB [H]
Synonym: Amuc_0540
Alternate gene names: 187735047
Gene position: 637337-638368 (Clockwise)
Preceding gene: 187735044
Following gene: 187735048
Centisome position: 23.92
GC content: 59.3
Gene sequence:
>1032_bases ATGTCATCTTTCTTTCAGAAAATTGTCAAACTTTTCTCCTATGACATTGGCATTGACCTGGGCACCGCCAACACCCTGGT CAACGTCAAGGACCAGGGCATCGTTCTGCGCGAGCCTTCGGTTGTCGCCGTCAAGGGGGACAAGGTTCTGGCCGTGGGAG ACGAAGCCAAGCGCATGCTGGGCCGCACCCCCGGCTCCGTCACGGCCATCCGGCCGTTGAAGGACGGCGTCATCGCCGAT TTCTACATCACGGAGGAAATGCTCCGCTACTTCATCAAAAAAGCCACGGCCAGGTACTACCTGATTAAGCCGCGCGTGCT CATCGCCATCCCCTCCGGCATTACGGAAGTGGAACGCAGGGCCGTCAAGGAATCCGCGGAAGCGGCCGGAGCCCGCCGCG TGCATCTGATTGAAGAACCCATGGCCGCCGCCATCGGTGTAGGCCTTCCGGTTCAGGAAGCTGCGGGCAACATGATTGTG GACATCGGCGGCGGCACGACGGAAGTGGCGCTTATTTCCCTTTCCGGCATCGTTTACAGCCGTTCCGTCCGCTGCGCCGG GGATGAACTGGACGACGCCATCATCTCCTACATGAGGAGAACCTACAATCTCATGGTCGGGGAACGTACTGCCGAAGACA TCAAAATCCGTATCGGCTCCGCCTATCCCCTGCCTCAGGAACTCTCTATCGAGGTCAAGGGCCGCGACCTGGTCGCGGGC CTGCCCAAGACAGTGACGATTCGATCGGAAGAAGTGCGTGAAGCGCTCACGGAACAGCTCAACACGATTGTTGACGCCGT GCGGACGACTTTGGAACGCTGCCCCCCTGAACTGGCCGCCGACCTTGTGGACCGGGGGATTGTTCTGGCTGGAGGAGGCG CTCTGCTGCGCGGTCTGGATCAGCTCCTGCATGAACAGACGGGACTGCCCATCCACATTGCGGAAGACCCTCTGAGCGCT GTTGCGGAAGGTACCGGGAAAGCCCTCCAGGAACTGGACTTCTTCACTAATGTTACTGATGCGGAAGACTAA
Upstream 100 bases:
>100_bases CCCCGGTCCGAGTGCCAGGTTTTCAGTCCCGTGAAAAGGAAAAAGCGAGGCGTTCCTCCACCGGCTGTCTCAGGGCTATG CCTTTATCCACTAGTTTTTT
Downstream 100 bases:
>100_bases AAACGGAATCTCCGGAGCAAGCGCTCCGGCCTTGCGTCTGCCGTACTGCCGCATCACATCAACGCAACTGCCTGCATGAT TCCTTTCCGGCCATCCCTAC
Product: rod shape-determining protein MreB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MSSFFQKIVKLFSYDIGIDLGTANTLVNVKDQGIVLREPSVVAVKGDKVLAVGDEAKRMLGRTPGSVTAIRPLKDGVIAD FYITEEMLRYFIKKATARYYLIKPRVLIAIPSGITEVERRAVKESAEAAGARRVHLIEEPMAAAIGVGLPVQEAAGNMIV DIGGGTTEVALISLSGIVYSRSVRCAGDELDDAIISYMRRTYNLMVGERTAEDIKIRIGSAYPLPQELSIEVKGRDLVAG LPKTVTIRSEEVREALTEQLNTIVDAVRTTLERCPPELAADLVDRGIVLAGGGALLRGLDQLLHEQTGLPIHIAEDPLSA VAEGTGKALQELDFFTNVTDAED
Sequences:
>Translated_343_residues MSSFFQKIVKLFSYDIGIDLGTANTLVNVKDQGIVLREPSVVAVKGDKVLAVGDEAKRMLGRTPGSVTAIRPLKDGVIAD FYITEEMLRYFIKKATARYYLIKPRVLIAIPSGITEVERRAVKESAEAAGARRVHLIEEPMAAAIGVGLPVQEAAGNMIV DIGGGTTEVALISLSGIVYSRSVRCAGDELDDAIISYMRRTYNLMVGERTAEDIKIRIGSAYPLPQELSIEVKGRDLVAG LPKTVTIRSEEVREALTEQLNTIVDAVRTTLERCPPELAADLVDRGIVLAGGGALLRGLDQLLHEQTGLPIHIAEDPLSA VAEGTGKALQELDFFTNVTDAED >Mature_342_residues SSFFQKIVKLFSYDIGIDLGTANTLVNVKDQGIVLREPSVVAVKGDKVLAVGDEAKRMLGRTPGSVTAIRPLKDGVIADF YITEEMLRYFIKKATARYYLIKPRVLIAIPSGITEVERRAVKESAEAAGARRVHLIEEPMAAAIGVGLPVQEAAGNMIVD IGGGTTEVALISLSGIVYSRSVRCAGDELDDAIISYMRRTYNLMVGERTAEDIKIRIGSAYPLPQELSIEVKGRDLVAGL PKTVTIRSEEVREALTEQLNTIVDAVRTTLERCPPELAADLVDRGIVLAGGGALLRGLDQLLHEQTGLPIHIAEDPLSAV AEGTGKALQELDFFTNVTDAED
Specific function: Involved in formation of the rod shape of the cell. May act as a negative regulator of ftsI [H]
COG id: COG1077
COG function: function code D; Actin-like ATPase involved in cell morphogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsA/mreB family [H]
Homologues:
Organism=Homo sapiens, GI16507237, Length=360, Percent_Identity=25.2777777777778, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI34419635, Length=381, Percent_Identity=25.7217847769029, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI87082236, Length=338, Percent_Identity=60.0591715976331, Blast_Score=406, Evalue=1e-114, Organism=Escherichia coli, GI1786870, Length=179, Percent_Identity=30.1675977653631, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17568549, Length=357, Percent_Identity=26.890756302521, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17534771, Length=356, Percent_Identity=25.8426966292135, Blast_Score=68, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6322426, Length=358, Percent_Identity=25.9776536312849, Blast_Score=62, Evalue=9e-11, Organism=Drosophila melanogaster, GI24641406, Length=366, Percent_Identity=25.1366120218579, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24641408, Length=366, Percent_Identity=25.1366120218579, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24641402, Length=366, Percent_Identity=25.1366120218579, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24641404, Length=366, Percent_Identity=25.1366120218579, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001023 - InterPro: IPR004753 [H]
Pfam domain/function: PF06723 MreB_Mbl [H]
EC number: NA
Molecular weight: Translated: 37027; Mature: 36896
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFFQKIVKLFSYDIGIDLGTANTLVNVKDQGIVLREPSVVAVKGDKVLAVGDEAKRML CCHHHHHHHHHHHHHCCEEECCCCEEEEECCCCEEEECCCEEEEECCEEEEECHHHHHHH GRTPGSVTAIRPLKDGVIADFYITEEMLRYFIKKATARYYLIKPRVLIAIPSGITEVERR CCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHCCEEEEECCEEEEEECCCHHHHHHH AVKESAEAAGARRVHLIEEPMAAAIGVGLPVQEAAGNMIVDIGGGTTEVALISLSGIVYS HHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHCCCCEEEEECCCCEEEEEEEEHHHHEE RSVRCAGDELDDAIISYMRRTYNLMVGERTAEDIKIRIGSAYPLPQELSIEVKGRDLVAG CCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEECCCCEECC LPKTVTIRSEEVREALTEQLNTIVDAVRTTLERCPPELAADLVDRGIVLAGGGALLRGLD CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEECCHHHHHHHH QLLHEQTGLPIHIAEDPLSAVAEGTGKALQELDFFTNVTDAED HHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SSFFQKIVKLFSYDIGIDLGTANTLVNVKDQGIVLREPSVVAVKGDKVLAVGDEAKRML CHHHHHHHHHHHHHCCEEECCCCEEEEECCCCEEEECCCEEEEECCEEEEECHHHHHHH GRTPGSVTAIRPLKDGVIADFYITEEMLRYFIKKATARYYLIKPRVLIAIPSGITEVERR CCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHCCEEEEECCEEEEEECCCHHHHHHH AVKESAEAAGARRVHLIEEPMAAAIGVGLPVQEAAGNMIVDIGGGTTEVALISLSGIVYS HHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHCCCCEEEEECCCCEEEEEEEEHHHHEE RSVRCAGDELDDAIISYMRRTYNLMVGERTAEDIKIRIGSAYPLPQELSIEVKGRDLVAG CCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEECCCCEECC LPKTVTIRSEEVREALTEQLNTIVDAVRTTLERCPPELAADLVDRGIVLAGGGALLRGLD CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEECCHHHHHHHH QLLHEQTGLPIHIAEDPLSAVAEGTGKALQELDFFTNVTDAED HHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]