| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187735023
Identifier: 187735023
GI number: 187735023
Start: 607527
End: 608639
Strand: Direct
Name: 187735023
Synonym: Amuc_0516
Alternate gene names: NA
Gene position: 607527-608639 (Clockwise)
Preceding gene: 187735010
Following gene: 187735024
Centisome position: 22.8
GC content: 59.3
Gene sequence:
>1113_bases ATGAATGCCGCTTCTTCCGTTCCCACCCGTTCTCCCCGCCTGCACTCCCTGGACGCCCTGCGCGGGCTGGACATGCTCAT TATCCTAGGGCTGGACGCCCTGATTCTGCTTCTGGCCTCCAGAAATCCGGAAAACGGCTTCCTGCAAGAAGCCGCGCGCC AGATGACCCATGCCCGTTGGGAAGGATTACACCTGTACGATCTGGTATTTCCCGTCTTTGTATTCATATCGGGCGCCTCC ATGTCCTTCTCCCTGGCGAAATACACCGGCACCTCCATCGCCCCCGGACTCTTCCATCTCTGGAAACGGGCTTTCGGCCT GGCTTTTCTGGGCCTTCTGGTCAACGGAACGCTTACCTGGACGGAAAGCATGCGTTACGCCTCCGTTCTGGGACTGATCG GTTTTTCCTGCGCTATTGCAGGAACCTGCATCCTGCTGTGCCGCCGGACGGGGGCGGTTGCCTCAGCAGCGGGATTCATC CTGGTCCTCATTACCCTGCTTCAGTTCACCTGCGGCAATTTTACGCCGGACGGCTCCGTCAACTCATGGGTGGACAGGCA CTGGCTCCCCGGCCGTCTGCATGGGGGAGTTTTTGACCCGGAAGGCCCGCTCTGCGTCGTTTCCGCCTCCGCCCTGTGCA TGGGAGGATGGATAGCGGGAAAGTTTTTGAAAGAAAGCCGGCTCCCCCCCGTGCGCCTCTGCACGGCAATGGCAGGAGCG GGCCTTCTCCTTTTCTGCACCGCCAGGATGCTGGACGGCACCTACCCCATCATTAAAAGCATGTGGACAGGGACCTTCGT CCTGGCCGCCGCCGGCATTTCCCTGACGTTTCTTTCCCTGTTTCATCTGGCCGTTGATGTGTGGAACGAAGGGAAATGGG CCCAATGGGCATTTCCCCTCCGCGTTATCGGCATAAACGCCCTGGCCGCCTACCTCATCCACTCCCTGCTCAATGTGCAT GAACTTAACCGTCGCATCTTCAGCGGCATGGCAGACCTCTTCCCCCCGTTCCAGCCCGTCTTCCTTGCCGTGTCCCTTCT GCTGCTGCAATGGCTGGCCTTGCTCTTCCTTGACAGGCGGCGACTGCCTTTCATCAAAAAAGCGGTCAAATGA
Upstream 100 bases:
>100_bases AATCAAGCACGATTCCCCTCCGTTCCGGCATGTTTGGAGTAATCCTGATAAAGACGCCCGTTTATGCCCGTATCTGTTTC CGTTCTTTCTCTCTGCCGTC
Downstream 100 bases:
>100_bases CCAGGCGGCGGATACCCCGGCCATGGTTGCCGGTGCTCCCCGAAAAAACGGATACTCCCCTGTGAAACGGCCAGCCAACA TTATCTCTTTCCCCCAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MNAASSVPTRSPRLHSLDALRGLDMLIILGLDALILLLASRNPENGFLQEAARQMTHARWEGLHLYDLVFPVFVFISGAS MSFSLAKYTGTSIAPGLFHLWKRAFGLAFLGLLVNGTLTWTESMRYASVLGLIGFSCAIAGTCILLCRRTGAVASAAGFI LVLITLLQFTCGNFTPDGSVNSWVDRHWLPGRLHGGVFDPEGPLCVVSASALCMGGWIAGKFLKESRLPPVRLCTAMAGA GLLLFCTARMLDGTYPIIKSMWTGTFVLAAAGISLTFLSLFHLAVDVWNEGKWAQWAFPLRVIGINALAAYLIHSLLNVH ELNRRIFSGMADLFPPFQPVFLAVSLLLLQWLALLFLDRRRLPFIKKAVK
Sequences:
>Translated_370_residues MNAASSVPTRSPRLHSLDALRGLDMLIILGLDALILLLASRNPENGFLQEAARQMTHARWEGLHLYDLVFPVFVFISGAS MSFSLAKYTGTSIAPGLFHLWKRAFGLAFLGLLVNGTLTWTESMRYASVLGLIGFSCAIAGTCILLCRRTGAVASAAGFI LVLITLLQFTCGNFTPDGSVNSWVDRHWLPGRLHGGVFDPEGPLCVVSASALCMGGWIAGKFLKESRLPPVRLCTAMAGA GLLLFCTARMLDGTYPIIKSMWTGTFVLAAAGISLTFLSLFHLAVDVWNEGKWAQWAFPLRVIGINALAAYLIHSLLNVH ELNRRIFSGMADLFPPFQPVFLAVSLLLLQWLALLFLDRRRLPFIKKAVK >Mature_370_residues MNAASSVPTRSPRLHSLDALRGLDMLIILGLDALILLLASRNPENGFLQEAARQMTHARWEGLHLYDLVFPVFVFISGAS MSFSLAKYTGTSIAPGLFHLWKRAFGLAFLGLLVNGTLTWTESMRYASVLGLIGFSCAIAGTCILLCRRTGAVASAAGFI LVLITLLQFTCGNFTPDGSVNSWVDRHWLPGRLHGGVFDPEGPLCVVSASALCMGGWIAGKFLKESRLPPVRLCTAMAGA GLLLFCTARMLDGTYPIIKSMWTGTFVLAAAGISLTFLSLFHLAVDVWNEGKWAQWAFPLRVIGINALAAYLIHSLLNVH ELNRRIFSGMADLFPPFQPVFLAVSLLLLQWLALLFLDRRRLPFIKKAVK
Specific function: Unknown
COG id: COG4299
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40465; Mature: 40465
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAASSVPTRSPRLHSLDALRGLDMLIILGLDALILLLASRNPENGFLQEAARQMTHARW CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH EGLHLYDLVFPVFVFISGASMSFSLAKYTGTSIAPGLFHLWKRAFGLAFLGLLVNGTLTW CCCHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH TESMRYASVLGLIGFSCAIAGTCILLCRRTGAVASAAGFILVLITLLQFTCGNFTPDGSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC NSWVDRHWLPGRLHGGVFDPEGPLCVVSASALCMGGWIAGKFLKESRLPPVRLCTAMAGA HHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC GLLLFCTARMLDGTYPIIKSMWTGTFVLAAAGISLTFLSLFHLAVDVWNEGKWAQWAFPL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHH RVIGINALAAYLIHSLLNVHELNRRIFSGMADLFPPFQPVFLAVSLLLLQWLALLFLDRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC RLPFIKKAVK CCHHHHHHCC >Mature Secondary Structure MNAASSVPTRSPRLHSLDALRGLDMLIILGLDALILLLASRNPENGFLQEAARQMTHARW CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH EGLHLYDLVFPVFVFISGASMSFSLAKYTGTSIAPGLFHLWKRAFGLAFLGLLVNGTLTW CCCHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH TESMRYASVLGLIGFSCAIAGTCILLCRRTGAVASAAGFILVLITLLQFTCGNFTPDGSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC NSWVDRHWLPGRLHGGVFDPEGPLCVVSASALCMGGWIAGKFLKESRLPPVRLCTAMAGA HHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC GLLLFCTARMLDGTYPIIKSMWTGTFVLAAAGISLTFLSLFHLAVDVWNEGKWAQWAFPL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHH RVIGINALAAYLIHSLLNVHELNRRIFSGMADLFPPFQPVFLAVSLLLLQWLALLFLDRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC RLPFIKKAVK CCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA