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The map label for this gene is ydiB [H]

Identifier: 187734990

GI number: 187734990

Start: 572521

End: 572970

Strand: Reverse

Name: ydiB [H]

Synonym: Amuc_0483

Alternate gene names: 187734990

Gene position: 572970-572521 (Counterclockwise)

Preceding gene: 187734997

Following gene: 187734987

Centisome position: 21.51

GC content: 56.44

Gene sequence:

>450_bases
ATGAGCGAATGGCATAAAATTTTTAGAAACGGCCCCGTTTTGACTCATTCCCCGGAGGAAATGAGGGAGCTGGGGAGGCA
AATAGGTAAAATTTTAATGCCCGGCGAAATTCTGGGCGTGGTGGGTGAGCTGGGGGCCGGAAAGACGCACCTGACCCAGG
GCATTATGGAGGGGCTGGGGAGTTCCGAGGCGGCTGCCAGCCCGACATTTTCCCTGGTGCATGAGCATGCTGACGGACGC
CTGCCGGCATGCCATTTTGATTTTTACCGGCTGAAGGATGAGTCCGAGCTGACCGGCATAGGGTGGGAAGAGTATCTGGA
CGGAGAGACTGTGCTCATTGTCGAATGGGCCAACCTGTTTCCGGAAGCGCTGCCGGAAGAAACCTCATGGCTGCTGCTGG
AACATGAAGGAAGCTGCCTGCGCCGCGTATCTCTGGCTCCTGCGGAATAA

Upstream 100 bases:

>100_bases
TGCGTATGCCATTGCTATCACTGTTAAGGTTCGCCCGCAGATGCGGGAGCCGCAATAAACCATATGACTTTATTTTAGAC
AAGCAAAATTTCATGAAAAA

Downstream 100 bases:

>100_bases
AACGGAGATCAGTACCCGATGCTTTGAGAAAACGCTTTATCAAAGCCGGGGCTGAGCCAGATGGTATTATGCATGGCTCC
GGGGAATTCCTGGTAACTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MSEWHKIFRNGPVLTHSPEEMRELGRQIGKILMPGEILGVVGELGAGKTHLTQGIMEGLGSSEAAASPTFSLVHEHADGR
LPACHFDFYRLKDESELTGIGWEEYLDGETVLIVEWANLFPEALPEETSWLLLEHEGSCLRRVSLAPAE

Sequences:

>Translated_149_residues
MSEWHKIFRNGPVLTHSPEEMRELGRQIGKILMPGEILGVVGELGAGKTHLTQGIMEGLGSSEAAASPTFSLVHEHADGR
LPACHFDFYRLKDESELTGIGWEEYLDGETVLIVEWANLFPEALPEETSWLLLEHEGSCLRRVSLAPAE
>Mature_148_residues
SEWHKIFRNGPVLTHSPEEMRELGRQIGKILMPGEILGVVGELGAGKTHLTQGIMEGLGSSEAAASPTFSLVHEHADGRL
PACHFDFYRLKDESELTGIGWEEYLDGETVLIVEWANLFPEALPEETSWLLLEHEGSCLRRVSLAPAE

Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=116, Percent_Identity=30.1724137931034, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 16507; Mature: 16376

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEWHKIFRNGPVLTHSPEEMRELGRQIGKILMPGEILGVVGELGAGKTHLTQGIMEGLG
CCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCC
SSEAAASPTFSLVHEHADGRLPACHFDFYRLKDESELTGIGWEEYLDGETVLIVEWANLF
CCCCCCCCHHHHHHHCCCCCCCEEECHHEEECCCCCCCCCCHHHHCCCCEEEEEEHHHHC
PEALPEETSWLLLEHEGSCLRRVSLAPAE
HHHCCCCCCEEEEECCCCHHHHCCCCCCC
>Mature Secondary Structure 
SEWHKIFRNGPVLTHSPEEMRELGRQIGKILMPGEILGVVGELGAGKTHLTQGIMEGLG
CHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCC
SSEAAASPTFSLVHEHADGRLPACHFDFYRLKDESELTGIGWEEYLDGETVLIVEWANLF
CCCCCCCCHHHHHHHCCCCCCCEEECHHEEECCCCCCCCCCHHHHCCCCEEEEEEHHHHC
PEALPEETSWLLLEHEGSCLRRVSLAPAE
HHHCCCCCCEEEEECCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]