| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is deaD [H]
Identifier: 187734959
GI number: 187734959
Start: 538994
End: 540808
Strand: Reverse
Name: deaD [H]
Synonym: Amuc_0452
Alternate gene names: 187734959
Gene position: 540808-538994 (Counterclockwise)
Preceding gene: 187734976
Following gene: 187734958
Centisome position: 20.3
GC content: 59.45
Gene sequence:
>1815_bases ATGACTCAAACATCTTCTTTTTCGGCTCTTGGTATTTCACCGGAGATTCTGGAGGCTATCGAAGTGCTCGGCTTCGATAC CCCTTCCTCCATTCAGGAGCAGGCGATTCCCGCCGCGATCGGAGGGGCCGATATTGTGGGGTTGTCCCATACGGGCTCCG GGAAGACGCTTGCCTTTGCCATTCCGGCCCTGGAGTGCATTGATCCTGAGGAACGCTGCGTTCAGGTGCTGGCCCTCTGT CCTACTCGGGAACTGGCCGTTCAGATTTGCCGGGAGGTGGACAAGCTGGCTTTGTTCATGGACGGTGTTTCCGCCGTCCC CATTTACGGAGGCTCTTCTTTCCGCCCGCAACTGGACGCCCTGAGGCGCGGGGTACAGTTTGTGGTGGGAACGCCCGGAC GCGTCATGGACCTGATGGAGTCCGGGGCGCTAAGGCTGGACGGTCTCCGCATGTTGATTCTGGATGAAGCGGACGAGATG CTGGATATGGGGTTTCTGGAAGATATCGAACGTATCGCGGACGCTATGCCGGAAGGGAAGCAGACCCTGTTTTTCTCCGC TACCATGTCTCCGGAAATCAGCCGCCTGGTGAGCAGGTTCATGAAGGAGCCCGTCCAGATTTCCATTGAACGGCCTACGC TGACGGTGCCTACCATTGAACAGGTTTATTACGAGGTGGTGTTTTCCTCCCGGATTGAGGTGCTCAGCCGGCTGCTTGAC ACCGGAAAGATTAAAATGGGGCTGGTGTTCGCCAATACCAAAAAGGTGGTGGATGACGTGGTGGACGGTCTGACGGCCCG CGGTTATCCGGTGGATCGCCTTCATGGGGATATGCCCCAGATGATGAGGGAGCGCGTGATGGATTCCTTCCGCAAGGGGA GCCTGCGCCTTCTGGTGGCGACGGATATTGCCGCTCGCGGCCTGGATGTGGACGATGTGGATGCCGTGGTGAATTTTGAA TTGCCGCGTGATCCGGAGGATTACGTGCACCGCATCGGCCGCACGGCACGCGCCGGCCGCAAGGGGAAGGCCATCACTTT TGTGGGGCGCCGTGATTTTTCCCTGATGAGCCGCATTGAACGTTTCATCGGCGTTAAGTTGACTCCGGAACCTGTGTTGA CTGCCGTTCAGGTGGACCAGCTCCGGACAGAGTCCCTGGTGGATGATATCCTGGAACGTCTCAAGCCGGATGCCGTGCTG CCGGAGGAATTGAAGGAAGTGGAGGCTGCGCCGGAGGCCATGGCTGCGGCCCTGTTTGACTTGCTCCGGGAACGTACGCA CCGGGAAGTGCAGCCCATTCCGGAAGACAAGCCCGCCCGCAGGGCGCGGCGTATGCCGCAGACCGGGGAGGAGGCGGAGA GCCCGCAGAAGGGTGATTCCTGGCAGCATAAGGGGGATACGGTTACGCTGTTTATGAATGGAGGCCGGATGATTGGCTTG CGGCCCAAAGACATAGCCGGGTTATTTTACAATACGGTGGAAATGGAAAAGGGAGCCGTGGGCGATATCCGGATTTTCCC CAAGCATTCCCTGATAGAAGTGGACGCTTCCGTGGCGCCCCTGCTTCTGGAGGCCCTGGCGACGGCTACCGTCTGCGGCT ATGAAGTTAATGTCCGTGAAGACAAGGGGGCTCCGGAATATTCCGGAACTCCGCGCTCTTCCCGCCGCAATGGAGGATTC CGCAACAGTTACCGCGGAGAGCGGGACCGCAGTGACCGGAGCGGATTCAGGGGAAACCGCGGGGGCTTCCGCAGTGACCG CGGCGAACGCTGGGGCGAACGTTCCCGCAGGGACGACAGGAAGAAGCGTTTCTGA
Upstream 100 bases:
>100_bases GGAAATCGTGGCATCTACGGTATCTTCCGTTCTTTTGGCTGGACACGGGAGGGAATAATGTTCAGCTTCTCCCGTGACTC TGACAGATCATTTTTCCCCC
Downstream 100 bases:
>100_bases TGCCTTCGCTATTCCGGACAGGGTTATTAACGCTGTTCCGGAATTGGCGCGGACATTTTGGAACGTTCCGGTTTATGATT GCTGTTTCCGCCGGTTTCTG
Product: DEAD/DEAH box helicase domain protein
Products: NA
Alternate protein names: ATP-dependent RNA helicase deaD homolog [H]
Number of amino acids: Translated: 604; Mature: 603
Protein sequence:
>604_residues MTQTSSFSALGISPEILEAIEVLGFDTPSSIQEQAIPAAIGGADIVGLSHTGSGKTLAFAIPALECIDPEERCVQVLALC PTRELAVQICREVDKLALFMDGVSAVPIYGGSSFRPQLDALRRGVQFVVGTPGRVMDLMESGALRLDGLRMLILDEADEM LDMGFLEDIERIADAMPEGKQTLFFSATMSPEISRLVSRFMKEPVQISIERPTLTVPTIEQVYYEVVFSSRIEVLSRLLD TGKIKMGLVFANTKKVVDDVVDGLTARGYPVDRLHGDMPQMMRERVMDSFRKGSLRLLVATDIAARGLDVDDVDAVVNFE LPRDPEDYVHRIGRTARAGRKGKAITFVGRRDFSLMSRIERFIGVKLTPEPVLTAVQVDQLRTESLVDDILERLKPDAVL PEELKEVEAAPEAMAAALFDLLRERTHREVQPIPEDKPARRARRMPQTGEEAESPQKGDSWQHKGDTVTLFMNGGRMIGL RPKDIAGLFYNTVEMEKGAVGDIRIFPKHSLIEVDASVAPLLLEALATATVCGYEVNVREDKGAPEYSGTPRSSRRNGGF RNSYRGERDRSDRSGFRGNRGGFRSDRGERWGERSRRDDRKKRF
Sequences:
>Translated_604_residues MTQTSSFSALGISPEILEAIEVLGFDTPSSIQEQAIPAAIGGADIVGLSHTGSGKTLAFAIPALECIDPEERCVQVLALC PTRELAVQICREVDKLALFMDGVSAVPIYGGSSFRPQLDALRRGVQFVVGTPGRVMDLMESGALRLDGLRMLILDEADEM LDMGFLEDIERIADAMPEGKQTLFFSATMSPEISRLVSRFMKEPVQISIERPTLTVPTIEQVYYEVVFSSRIEVLSRLLD TGKIKMGLVFANTKKVVDDVVDGLTARGYPVDRLHGDMPQMMRERVMDSFRKGSLRLLVATDIAARGLDVDDVDAVVNFE LPRDPEDYVHRIGRTARAGRKGKAITFVGRRDFSLMSRIERFIGVKLTPEPVLTAVQVDQLRTESLVDDILERLKPDAVL PEELKEVEAAPEAMAAALFDLLRERTHREVQPIPEDKPARRARRMPQTGEEAESPQKGDSWQHKGDTVTLFMNGGRMIGL RPKDIAGLFYNTVEMEKGAVGDIRIFPKHSLIEVDASVAPLLLEALATATVCGYEVNVREDKGAPEYSGTPRSSRRNGGF RNSYRGERDRSDRSGFRGNRGGFRSDRGERWGERSRRDDRKKRF >Mature_603_residues TQTSSFSALGISPEILEAIEVLGFDTPSSIQEQAIPAAIGGADIVGLSHTGSGKTLAFAIPALECIDPEERCVQVLALCP TRELAVQICREVDKLALFMDGVSAVPIYGGSSFRPQLDALRRGVQFVVGTPGRVMDLMESGALRLDGLRMLILDEADEML DMGFLEDIERIADAMPEGKQTLFFSATMSPEISRLVSRFMKEPVQISIERPTLTVPTIEQVYYEVVFSSRIEVLSRLLDT GKIKMGLVFANTKKVVDDVVDGLTARGYPVDRLHGDMPQMMRERVMDSFRKGSLRLLVATDIAARGLDVDDVDAVVNFEL PRDPEDYVHRIGRTARAGRKGKAITFVGRRDFSLMSRIERFIGVKLTPEPVLTAVQVDQLRTESLVDDILERLKPDAVLP EELKEVEAAPEAMAAALFDLLRERTHREVQPIPEDKPARRARRMPQTGEEAESPQKGDSWQHKGDTVTLFMNGGRMIGLR PKDIAGLFYNTVEMEKGAVGDIRIFPKHSLIEVDASVAPLLLEALATATVCGYEVNVREDKGAPEYSGTPRSSRRNGGFR NSYRGERDRSDRSGFRGNRGGFRSDRGERWGERSRRDDRKKRF
Specific function: Has a helix-destabilizing activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=373, Percent_Identity=39.142091152815, Blast_Score=282, Evalue=6e-76, Organism=Homo sapiens, GI20149629, Length=366, Percent_Identity=37.9781420765027, Blast_Score=252, Evalue=6e-67, Organism=Homo sapiens, GI222352149, Length=368, Percent_Identity=37.7717391304348, Blast_Score=243, Evalue=4e-64, Organism=Homo sapiens, GI164664518, Length=370, Percent_Identity=32.7027027027027, Blast_Score=240, Evalue=4e-63, Organism=Homo sapiens, GI41327773, Length=356, Percent_Identity=36.7977528089888, Blast_Score=237, Evalue=3e-62, Organism=Homo sapiens, GI4503529, Length=372, Percent_Identity=37.6344086021505, Blast_Score=236, Evalue=6e-62, Organism=Homo sapiens, GI169881239, Length=376, Percent_Identity=39.6276595744681, Blast_Score=236, Evalue=6e-62, Organism=Homo sapiens, GI13514809, Length=376, Percent_Identity=39.6276595744681, Blast_Score=236, Evalue=6e-62, Organism=Homo sapiens, GI83700235, Length=372, Percent_Identity=37.3655913978495, Blast_Score=235, Evalue=7e-62, Organism=Homo sapiens, GI301171467, Length=373, Percent_Identity=40.2144772117962, Blast_Score=235, Evalue=1e-61, Organism=Homo sapiens, GI87196351, Length=373, Percent_Identity=40.2144772117962, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI301171475, Length=373, Percent_Identity=40.2144772117962, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI148613856, Length=351, Percent_Identity=37.8917378917379, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI38201710, Length=351, Percent_Identity=37.8917378917379, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI4758138, Length=354, Percent_Identity=37.2881355932203, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI41327771, Length=393, Percent_Identity=34.8600508905852, Blast_Score=231, Evalue=2e-60, Organism=Homo sapiens, GI41327776, Length=366, Percent_Identity=35.792349726776, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI224593278, Length=374, Percent_Identity=36.096256684492, Blast_Score=224, Evalue=3e-58, Organism=Homo sapiens, GI4758112, Length=386, Percent_Identity=32.3834196891192, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI18375623, Length=386, Percent_Identity=32.3834196891192, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI50659095, Length=410, Percent_Identity=32.6829268292683, Blast_Score=223, Evalue=6e-58, Organism=Homo sapiens, GI21040371, Length=386, Percent_Identity=32.3834196891192, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI45446747, Length=372, Percent_Identity=34.9462365591398, Blast_Score=220, Evalue=4e-57, Organism=Homo sapiens, GI45446743, Length=372, Percent_Identity=34.9462365591398, Blast_Score=220, Evalue=4e-57, Organism=Homo sapiens, GI13129006, Length=376, Percent_Identity=34.3085106382979, Blast_Score=217, Evalue=3e-56, Organism=Homo sapiens, GI31542656, Length=469, Percent_Identity=33.0490405117271, Blast_Score=215, Evalue=1e-55, Organism=Homo sapiens, GI21071032, Length=399, Percent_Identity=34.8370927318296, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI256223453, Length=382, Percent_Identity=31.6753926701571, Blast_Score=212, Evalue=8e-55, Organism=Homo sapiens, GI55749865, Length=352, Percent_Identity=30.6818181818182, Blast_Score=203, Evalue=4e-52, Organism=Homo sapiens, GI262231852, Length=362, Percent_Identity=35.6353591160221, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI216548263, Length=362, Percent_Identity=35.6353591160221, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI262118318, Length=362, Percent_Identity=35.6353591160221, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI13518015, Length=362, Percent_Identity=35.6353591160221, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI188035877, Length=384, Percent_Identity=32.2916666666667, Blast_Score=199, Evalue=6e-51, Organism=Homo sapiens, GI8922886, Length=379, Percent_Identity=32.4538258575198, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI6005743, Length=384, Percent_Identity=31.7708333333333, Blast_Score=197, Evalue=3e-50, Organism=Homo sapiens, GI51094101, Length=456, Percent_Identity=28.7280701754386, Blast_Score=189, Evalue=6e-48, Organism=Homo sapiens, GI164419743, Length=456, Percent_Identity=28.7280701754386, Blast_Score=189, Evalue=6e-48, Organism=Homo sapiens, GI13514831, Length=357, Percent_Identity=34.1736694677871, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI38327634, Length=346, Percent_Identity=34.1040462427746, Blast_Score=185, Evalue=1e-46, Organism=Homo sapiens, GI62241022, Length=362, Percent_Identity=32.3204419889503, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI164419732, Length=340, Percent_Identity=32.3529411764706, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI41327779, Length=360, Percent_Identity=33.0555555555556, Blast_Score=172, Evalue=7e-43, Organism=Homo sapiens, GI62241024, Length=339, Percent_Identity=31.858407079646, Blast_Score=171, Evalue=3e-42, Organism=Homo sapiens, GI38569505, Length=377, Percent_Identity=31.2997347480106, Blast_Score=170, Evalue=4e-42, Organism=Homo sapiens, GI17505907, Length=405, Percent_Identity=30.3703703703704, Blast_Score=170, Evalue=4e-42, Organism=Homo sapiens, GI38569503, Length=377, Percent_Identity=31.2997347480106, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI9506931, Length=489, Percent_Identity=28.4253578732106, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI256773275, Length=406, Percent_Identity=30.0492610837438, Blast_Score=147, Evalue=4e-35, Organism=Homo sapiens, GI4826686, Length=335, Percent_Identity=29.8507462686567, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI9966805, Length=319, Percent_Identity=29.7805642633229, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI20336298, Length=217, Percent_Identity=34.5622119815668, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI154759257, Length=454, Percent_Identity=25.9911894273128, Blast_Score=115, Evalue=1e-25, Organism=Escherichia coli, GI87082221, Length=565, Percent_Identity=38.0530973451327, Blast_Score=345, Evalue=5e-96, Organism=Escherichia coli, GI1787016, Length=364, Percent_Identity=40.1098901098901, Blast_Score=281, Evalue=8e-77, Organism=Escherichia coli, GI1787605, Length=365, Percent_Identity=41.3698630136986, Blast_Score=271, Evalue=1e-73, Organism=Escherichia coli, GI1790214, Length=382, Percent_Identity=35.0785340314136, Blast_Score=226, Evalue=3e-60, Organism=Escherichia coli, GI1788930, Length=373, Percent_Identity=36.4611260053619, Blast_Score=206, Evalue=3e-54, Organism=Escherichia coli, GI48994977, Length=356, Percent_Identity=25, Blast_Score=79, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71995724, Length=371, Percent_Identity=39.0835579514825, Blast_Score=275, Evalue=6e-74, Organism=Caenorhabditis elegans, GI17507121, Length=371, Percent_Identity=38.8140161725067, Blast_Score=274, Evalue=8e-74, Organism=Caenorhabditis elegans, GI71987143, Length=367, Percent_Identity=38.6920980926431, Blast_Score=274, Evalue=1e-73, Organism=Caenorhabditis elegans, GI17555296, Length=363, Percent_Identity=38.5674931129477, Blast_Score=246, Evalue=3e-65, Organism=Caenorhabditis elegans, GI32565321, Length=377, Percent_Identity=36.3395225464191, Blast_Score=238, Evalue=9e-63, Organism=Caenorhabditis elegans, GI71995718, Length=371, Percent_Identity=39.3530997304582, Blast_Score=238, Evalue=1e-62, Organism=Caenorhabditis elegans, GI17552114, Length=373, Percent_Identity=33.2439678284182, Blast_Score=234, Evalue=7e-62, Organism=Caenorhabditis elegans, GI71982858, Length=376, Percent_Identity=34.3085106382979, Blast_Score=230, Evalue=2e-60, Organism=Caenorhabditis elegans, GI86570094, Length=357, Percent_Identity=37.2549019607843, Blast_Score=228, Evalue=5e-60, Organism=Caenorhabditis elegans, GI115533224, Length=340, Percent_Identity=37.9411764705882, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI17537549, Length=363, Percent_Identity=37.7410468319559, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17510307, Length=367, Percent_Identity=35.4223433242507, Blast_Score=221, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17510309, Length=367, Percent_Identity=35.4223433242507, Blast_Score=221, Evalue=1e-57, Organism=Caenorhabditis elegans, GI71995514, Length=367, Percent_Identity=35.149863760218, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17552642, Length=365, Percent_Identity=36.1643835616438, Blast_Score=218, Evalue=6e-57, Organism=Caenorhabditis elegans, GI115532548, Length=382, Percent_Identity=33.5078534031414, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17510559, Length=389, Percent_Identity=32.6478149100257, Blast_Score=209, Evalue=4e-54, Organism=Caenorhabditis elegans, GI115532546, Length=382, Percent_Identity=33.5078534031414, Blast_Score=209, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17507945, Length=378, Percent_Identity=34.6560846560847, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17507877, Length=381, Percent_Identity=34.1207349081365, Blast_Score=194, Evalue=9e-50, Organism=Caenorhabditis elegans, GI193206561, Length=346, Percent_Identity=32.6589595375723, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17507881, Length=406, Percent_Identity=31.7733990147783, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI71999644, Length=364, Percent_Identity=30.4945054945055, Blast_Score=188, Evalue=6e-48, Organism=Caenorhabditis elegans, GI71999646, Length=364, Percent_Identity=30.4945054945055, Blast_Score=188, Evalue=8e-48, Organism=Caenorhabditis elegans, GI17509811, Length=423, Percent_Identity=30.0236406619385, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17536099, Length=394, Percent_Identity=30.9644670050761, Blast_Score=186, Evalue=4e-47, Organism=Caenorhabditis elegans, GI17536101, Length=394, Percent_Identity=30.9644670050761, Blast_Score=185, Evalue=6e-47, Organism=Caenorhabditis elegans, GI17507879, Length=394, Percent_Identity=31.9796954314721, Blast_Score=184, Evalue=9e-47, Organism=Caenorhabditis elegans, GI17536103, Length=393, Percent_Identity=30.7888040712468, Blast_Score=183, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17505370, Length=355, Percent_Identity=32.6760563380282, Blast_Score=179, Evalue=4e-45, Organism=Caenorhabditis elegans, GI17553716, Length=361, Percent_Identity=30.7479224376731, Blast_Score=174, Evalue=2e-43, Organism=Caenorhabditis elegans, GI193208216, Length=385, Percent_Identity=31.6883116883117, Blast_Score=171, Evalue=1e-42, Organism=Caenorhabditis elegans, GI71990816, Length=375, Percent_Identity=29.6, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17507641, Length=449, Percent_Identity=28.0623608017817, Blast_Score=148, Evalue=1e-35, Organism=Caenorhabditis elegans, GI71982862, Length=213, Percent_Identity=37.5586854460094, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17556951, Length=369, Percent_Identity=26.0162601626016, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI17508543, Length=377, Percent_Identity=29.1777188328912, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI25148203, Length=395, Percent_Identity=26.5822784810127, Blast_Score=138, Evalue=8e-33, Organism=Caenorhabditis elegans, GI32564046, Length=425, Percent_Identity=27.2941176470588, Blast_Score=132, Evalue=7e-31, Organism=Caenorhabditis elegans, GI25148291, Length=341, Percent_Identity=27.8592375366569, Blast_Score=119, Evalue=7e-27, Organism=Caenorhabditis elegans, GI71997889, Length=385, Percent_Identity=26.7532467532467, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI71987152, Length=108, Percent_Identity=45.3703703703704, Blast_Score=105, Evalue=7e-23, Organism=Caenorhabditis elegans, GI25148205, Length=313, Percent_Identity=25.8785942492013, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17565430, Length=406, Percent_Identity=24.6305418719212, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17566630, Length=329, Percent_Identity=26.4437689969605, Blast_Score=80, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6320224, Length=372, Percent_Identity=38.7096774193548, Blast_Score=278, Evalue=2e-75, Organism=Saccharomyces cerevisiae, GI6321856, Length=369, Percent_Identity=39.8373983739837, Blast_Score=254, Evalue=3e-68, Organism=Saccharomyces cerevisiae, GI6324217, Length=364, Percent_Identity=37.6373626373626, Blast_Score=251, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6322912, Length=366, Percent_Identity=39.0710382513661, Blast_Score=243, Evalue=5e-65, Organism=Saccharomyces cerevisiae, GI6322323, Length=366, Percent_Identity=39.0710382513661, Blast_Score=243, Evalue=5e-65, Organism=Saccharomyces cerevisiae, GI6320041, Length=370, Percent_Identity=35.4054054054054, Blast_Score=236, Evalue=6e-63, Organism=Saccharomyces cerevisiae, GI6324778, Length=367, Percent_Identity=36.7847411444142, Blast_Score=228, Evalue=2e-60, Organism=Saccharomyces cerevisiae, GI6321360, Length=362, Percent_Identity=40.0552486187845, Blast_Score=227, Evalue=5e-60, Organism=Saccharomyces cerevisiae, GI6324620, Length=370, Percent_Identity=33.7837837837838, Blast_Score=226, Evalue=5e-60, Organism=Saccharomyces cerevisiae, GI6323021, Length=353, Percent_Identity=35.6940509915014, Blast_Score=221, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6325138, Length=369, Percent_Identity=35.230352303523, Blast_Score=218, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6320119, Length=375, Percent_Identity=30.1333333333333, Blast_Score=205, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6321963, Length=385, Percent_Identity=35.0649350649351, Blast_Score=200, Evalue=6e-52, Organism=Saccharomyces cerevisiae, GI6323947, Length=365, Percent_Identity=33.972602739726, Blast_Score=199, Evalue=9e-52, Organism=Saccharomyces cerevisiae, GI6320449, Length=373, Percent_Identity=34.0482573726542, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6322427, Length=364, Percent_Identity=32.6923076923077, Blast_Score=187, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6321111, Length=379, Percent_Identity=32.1899736147757, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6319714, Length=381, Percent_Identity=28.6089238845144, Blast_Score=171, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6323306, Length=541, Percent_Identity=26.8022181146026, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6320400, Length=382, Percent_Identity=26.1780104712042, Blast_Score=154, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6319618, Length=411, Percent_Identity=29.683698296837, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6321267, Length=344, Percent_Identity=31.9767441860465, Blast_Score=149, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6322876, Length=423, Percent_Identity=27.4231678486998, Blast_Score=145, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6320173, Length=220, Percent_Identity=30.9090909090909, Blast_Score=119, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6324366, Length=357, Percent_Identity=23.8095238095238, Blast_Score=103, Evalue=6e-23, Organism=Saccharomyces cerevisiae, GI6321374, Length=466, Percent_Identity=24.4635193133047, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24645031, Length=371, Percent_Identity=38.8140161725067, Blast_Score=275, Evalue=5e-74, Organism=Drosophila melanogaster, GI21355075, Length=356, Percent_Identity=37.9213483146067, Blast_Score=247, Evalue=2e-65, Organism=Drosophila melanogaster, GI24582080, Length=367, Percent_Identity=38.9645776566758, Blast_Score=244, Evalue=2e-64, Organism=Drosophila melanogaster, GI24582078, Length=367, Percent_Identity=38.9645776566758, Blast_Score=244, Evalue=2e-64, Organism=Drosophila melanogaster, GI17136248, Length=367, Percent_Identity=38.9645776566758, Blast_Score=244, Evalue=2e-64, Organism=Drosophila melanogaster, GI24582075, Length=367, Percent_Identity=38.9645776566758, Blast_Score=244, Evalue=2e-64, Organism=Drosophila melanogaster, GI24585582, Length=367, Percent_Identity=35.4223433242507, Blast_Score=243, Evalue=3e-64, Organism=Drosophila melanogaster, GI24583279, Length=370, Percent_Identity=34.3243243243243, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI24583281, Length=370, Percent_Identity=34.3243243243243, Blast_Score=239, Evalue=3e-63, Organism=Drosophila melanogaster, GI24642151, Length=355, Percent_Identity=36.9014084507042, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI24584399, Length=353, Percent_Identity=37.9603399433428, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI24584994, Length=397, Percent_Identity=36.0201511335013, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI18857967, Length=360, Percent_Identity=38.0555555555556, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI17985987, Length=379, Percent_Identity=37.9947229551451, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI28574962, Length=355, Percent_Identity=38.0281690140845, Blast_Score=228, Evalue=1e-59, Organism=Drosophila melanogaster, GI24644483, Length=360, Percent_Identity=37.2222222222222, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24644479, Length=360, Percent_Identity=37.2222222222222, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI281361218, Length=360, Percent_Identity=37.2222222222222, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24644481, Length=360, Percent_Identity=37.2222222222222, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24644487, Length=360, Percent_Identity=37.2222222222222, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI45551833, Length=360, Percent_Identity=37.2222222222222, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24644485, Length=360, Percent_Identity=37.2222222222222, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24662330, Length=369, Percent_Identity=35.7723577235772, Blast_Score=218, Evalue=1e-56, Organism=Drosophila melanogaster, GI17136814, Length=379, Percent_Identity=36.4116094986807, Blast_Score=217, Evalue=2e-56, Organism=Drosophila melanogaster, GI24581954, Length=374, Percent_Identity=32.3529411764706, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24581952, Length=374, Percent_Identity=32.3529411764706, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24581956, Length=374, Percent_Identity=32.3529411764706, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI17977678, Length=359, Percent_Identity=36.2116991643454, Blast_Score=214, Evalue=2e-55, Organism=Drosophila melanogaster, GI21356161, Length=402, Percent_Identity=32.089552238806, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI28571808, Length=354, Percent_Identity=33.8983050847458, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI28571809, Length=354, Percent_Identity=33.8983050847458, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI17647335, Length=361, Percent_Identity=29.6398891966759, Blast_Score=185, Evalue=8e-47, Organism=Drosophila melanogaster, GI28575014, Length=391, Percent_Identity=30.4347826086957, Blast_Score=183, Evalue=4e-46, Organism=Drosophila melanogaster, GI28571338, Length=445, Percent_Identity=29.8876404494382, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI18859659, Length=445, Percent_Identity=29.8876404494382, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI281365720, Length=316, Percent_Identity=35.7594936708861, Blast_Score=181, Evalue=2e-45, Organism=Drosophila melanogaster, GI21355559, Length=379, Percent_Identity=32.7176781002639, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24666101, Length=380, Percent_Identity=32.1052631578947, Blast_Score=166, Evalue=4e-41, Organism=Drosophila melanogaster, GI24643725, Length=484, Percent_Identity=27.0661157024793, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI24642822, Length=369, Percent_Identity=30.8943089430894, Blast_Score=158, Evalue=1e-38, Organism=Drosophila melanogaster, GI20130173, Length=469, Percent_Identity=27.9317697228145, Blast_Score=155, Evalue=1e-37, Organism=Drosophila melanogaster, GI19920478, Length=377, Percent_Identity=28.1167108753316, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI24668515, Length=332, Percent_Identity=27.710843373494, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI17136666, Length=410, Percent_Identity=27.8048780487805, Blast_Score=124, Evalue=3e-28, Organism=Drosophila melanogaster, GI24640164, Length=378, Percent_Identity=25.3968253968254, Blast_Score=122, Evalue=8e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 67116; Mature: 66985
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTSSFSALGISPEILEAIEVLGFDTPSSIQEQAIPAAIGGADIVGLSHTGSGKTLAFA CCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCHHCCCCEEEEEECCCCCCEEEEE IPALECIDPEERCVQVLALCPTRELAVQICREVDKLALFMDGVSAVPIYGGSSFRPQLDA ECHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHH LRRGVQFVVGTPGRVMDLMESGALRLDGLRMLILDEADEMLDMGFLEDIERIADAMPEGK HHCCCEEEECCCHHHHHHHHCCCEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC QTLFFSATMSPEISRLVSRFMKEPVQISIERPTLTVPTIEQVYYEVVFSSRIEVLSRLLD CEEEEEECCCHHHHHHHHHHHCCCEEEEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHH TGKIKMGLVFANTKKVVDDVVDGLTARGYPVDRLHGDMPQMMRERVMDSFRKGSLRLLVA CCCEEEEEEEECHHHHHHHHHHCHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEEE TDIAARGLDVDDVDAVVNFELPRDPEDYVHRIGRTARAGRKGKAITFVGRRDFSLMSRIE ECHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH RFIGVKLTPEPVLTAVQVDQLRTESLVDDILERLKPDAVLPEELKEVEAAPEAMAAALFD HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LLRERTHREVQPIPEDKPARRARRMPQTGEEAESPQKGDSWQHKGDTVTLFMNGGRMIGL HHHHHHHCCCCCCCCCCHHHHHHCCCCCCCHHCCCCCCCCCCCCCCEEEEEEECCEEEEC RPKDIAGLFYNTVEMEKGAVGDIRIFPKHSLIEVDASVAPLLLEALATATVCGYEVNVRE CCHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHCCEEEEEEC DKGAPEYSGTPRSSRRNGGFRNSYRGERDRSDRSGFRGNRGGFRSDRGERWGERSRRDDR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH KKRF HCCC >Mature Secondary Structure TQTSSFSALGISPEILEAIEVLGFDTPSSIQEQAIPAAIGGADIVGLSHTGSGKTLAFA CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCHHCCCCEEEEEECCCCCCEEEEE IPALECIDPEERCVQVLALCPTRELAVQICREVDKLALFMDGVSAVPIYGGSSFRPQLDA ECHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHH LRRGVQFVVGTPGRVMDLMESGALRLDGLRMLILDEADEMLDMGFLEDIERIADAMPEGK HHCCCEEEECCCHHHHHHHHCCCEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC QTLFFSATMSPEISRLVSRFMKEPVQISIERPTLTVPTIEQVYYEVVFSSRIEVLSRLLD CEEEEEECCCHHHHHHHHHHHCCCEEEEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHH TGKIKMGLVFANTKKVVDDVVDGLTARGYPVDRLHGDMPQMMRERVMDSFRKGSLRLLVA CCCEEEEEEEECHHHHHHHHHHCHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEEE TDIAARGLDVDDVDAVVNFELPRDPEDYVHRIGRTARAGRKGKAITFVGRRDFSLMSRIE ECHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH RFIGVKLTPEPVLTAVQVDQLRTESLVDDILERLKPDAVLPEELKEVEAAPEAMAAALFD HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LLRERTHREVQPIPEDKPARRARRMPQTGEEAESPQKGDSWQHKGDTVTLFMNGGRMIGL HHHHHHHCCCCCCCCCCHHHHHHCCCCCCCHHCCCCCCCCCCCCCCEEEEEEECCEEEEC RPKDIAGLFYNTVEMEKGAVGDIRIFPKHSLIEVDASVAPLLLEALATATVCGYEVNVRE CCHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHCCEEEEEEC DKGAPEYSGTPRSSRRNGGFRNSYRGERDRSDRSGFRGNRGGFRSDRGERWGERSRRDDR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH KKRF HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]