| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734925
Identifier: 187734925
GI number: 187734925
Start: 498523
End: 499581
Strand: Direct
Name: 187734925
Synonym: Amuc_0418
Alternate gene names: NA
Gene position: 498523-499581 (Clockwise)
Preceding gene: 187734924
Following gene: 187734928
Centisome position: 18.71
GC content: 57.7
Gene sequence:
>1059_bases ATGAGACAAATGACAGGAACCATGCTGCTTCTGTCCTCAGCAGTCGTTATGGCCGCTCCCTGGGCGCATGCGGAGGAAAA GACAATCCAGCTCACGGAAGCGGAACAACAGGAAATCAAGACGGCAAACGAAAAGCTGCTGGGCCTTACCCTCCGTTTCC TGCATGACTCATGGCCGCTGGAAATCATGTTTCCCGGAGAAGTGCAGGAGGAATTCCACTCCATTCTTCAATGCCATCAG ATGCTGGAGCAATTCCGCCAAACCGGCAACCTCCTGCTCCAGACGCCGGACCGTACCACGCCTCTGCACCTCTGCATTGC CCTGGGATTAAACCGGCTGGCCGTCCGGATGGTAGAAGCGGGCGCTCCCGTCAATGCTCAATCCATTTTCATGCATGACG GCACAAAAGAGCCGGGAGACACCCCCCTTACCTGGGCGTGCCTCTCAGGCCTTTATATGAATTCCACCGCGGAAGAAAGG CTGCCGCTGGTGCACGCCCTGCTCAAACACGGCGCCGAGCCGGATCAGCCGGGGCCTTGGGGCGTCACCCCGTTCATGTA TTCCGCCGCCCTCAATGACTCCGATCCGGGTCAGGAAAAAATAGCGCTGGCGCTCCTGGACGCCGGCTCCCCGGATCTCA AGCGCAGAATGAACGCTCAGGCGCGCGGAGTCGGCTTCCTCAGTCTGTCCCCCGCCATTTACGAACGGCTCATCAAAGCC GGCTGCGATGTTAACGAACGCTTTTTTGAAAGCAAGCAATCACCCCTCCACCTGGTCTGCACCAAGGAAAAACCGGCGGA ACGCCTCATTCCTCTCATTGAACTTCTCATCAACGCGGGAGCGGATCCCAACCAGCCGGACGTGGATGGCCTGACTCCGC TGATGGCCTGCAACTCTCCGGAAATAGCCGTTTGCCTCATGAATCACGGCGCCAATCCCTCTCTCCGCAACGATGACGGC CAGACAGCCTATGACTTCCATATGAAAAACGGGTATCCCCCCATTGCGGAAGCCATCAAGCACTGGCAGTCCAAGCAGAA AAAAGGGGAAACCCGCTAA
Upstream 100 bases:
>100_bases GACCGCACGGTGGAAGCTGTCCGCATCAGTCTCTCCAGGCTGGGTTGACATGCCCCTGATTTGAAGTGACAGCTCACGGC CCTTCCCCTATAAGGACTTC
Downstream 100 bases:
>100_bases ATAGCGGACGCCATCGCAGGCTTTGCAGCCCTCCTTCTCCCACTGGTGCGGGAAAGAAAAGCGGATACCGTCACGGCCCG GGAACAGGCGGCCGGAACCC
Product: Ankyrin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MRQMTGTMLLLSSAVVMAAPWAHAEEKTIQLTEAEQQEIKTANEKLLGLTLRFLHDSWPLEIMFPGEVQEEFHSILQCHQ MLEQFRQTGNLLLQTPDRTTPLHLCIALGLNRLAVRMVEAGAPVNAQSIFMHDGTKEPGDTPLTWACLSGLYMNSTAEER LPLVHALLKHGAEPDQPGPWGVTPFMYSAALNDSDPGQEKIALALLDAGSPDLKRRMNAQARGVGFLSLSPAIYERLIKA GCDVNERFFESKQSPLHLVCTKEKPAERLIPLIELLINAGADPNQPDVDGLTPLMACNSPEIAVCLMNHGANPSLRNDDG QTAYDFHMKNGYPPIAEAIKHWQSKQKKGETR
Sequences:
>Translated_352_residues MRQMTGTMLLLSSAVVMAAPWAHAEEKTIQLTEAEQQEIKTANEKLLGLTLRFLHDSWPLEIMFPGEVQEEFHSILQCHQ MLEQFRQTGNLLLQTPDRTTPLHLCIALGLNRLAVRMVEAGAPVNAQSIFMHDGTKEPGDTPLTWACLSGLYMNSTAEER LPLVHALLKHGAEPDQPGPWGVTPFMYSAALNDSDPGQEKIALALLDAGSPDLKRRMNAQARGVGFLSLSPAIYERLIKA GCDVNERFFESKQSPLHLVCTKEKPAERLIPLIELLINAGADPNQPDVDGLTPLMACNSPEIAVCLMNHGANPSLRNDDG QTAYDFHMKNGYPPIAEAIKHWQSKQKKGETR >Mature_352_residues MRQMTGTMLLLSSAVVMAAPWAHAEEKTIQLTEAEQQEIKTANEKLLGLTLRFLHDSWPLEIMFPGEVQEEFHSILQCHQ MLEQFRQTGNLLLQTPDRTTPLHLCIALGLNRLAVRMVEAGAPVNAQSIFMHDGTKEPGDTPLTWACLSGLYMNSTAEER LPLVHALLKHGAEPDQPGPWGVTPFMYSAALNDSDPGQEKIALALLDAGSPDLKRRMNAQARGVGFLSLSPAIYERLIKA GCDVNERFFESKQSPLHLVCTKEKPAERLIPLIELLINAGADPNQPDVDGLTPLMACNSPEIAVCLMNHGANPSLRNDDG QTAYDFHMKNGYPPIAEAIKHWQSKQKKGETR
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38913; Mature: 38913
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQMTGTMLLLSSAVVMAAPWAHAEEKTIQLTEAEQQEIKTANEKLLGLTLRFLHDSWPL CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCE EIMFPGEVQEEFHSILQCHQMLEQFRQTGNLLLQTPDRTTPLHLCIALGLNRLAVRMVEA EEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHC GAPVNAQSIFMHDGTKEPGDTPLTWACLSGLYMNSTAEERLPLVHALLKHGAEPDQPGPW CCCCCCCEEEEECCCCCCCCCCHHHHHHCCHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC GVTPFMYSAALNDSDPGQEKIALALLDAGSPDLKRRMNAQARGVGFLSLSPAIYERLIKA CCCHHHHHHHCCCCCCCHHHEEEEEECCCCHHHHHHHCCHHCCCEEEEECHHHHHHHHHC GCDVNERFFESKQSPLHLVCTKEKPAERLIPLIELLINAGADPNQPDVDGLTPLMACNSP CCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCC EIAVCLMNHGANPSLRNDDGQTAYDFHMKNGYPPIAEAIKHWQSKQKKGETR CEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRQMTGTMLLLSSAVVMAAPWAHAEEKTIQLTEAEQQEIKTANEKLLGLTLRFLHDSWPL CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCE EIMFPGEVQEEFHSILQCHQMLEQFRQTGNLLLQTPDRTTPLHLCIALGLNRLAVRMVEA EEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHC GAPVNAQSIFMHDGTKEPGDTPLTWACLSGLYMNSTAEERLPLVHALLKHGAEPDQPGPW CCCCCCCEEEEECCCCCCCCCCHHHHHHCCHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC GVTPFMYSAALNDSDPGQEKIALALLDAGSPDLKRRMNAQARGVGFLSLSPAIYERLIKA CCCHHHHHHHCCCCCCCHHHEEEEEECCCCHHHHHHHCCHHCCCEEEEECHHHHHHHHHC GCDVNERFFESKQSPLHLVCTKEKPAERLIPLIELLINAGADPNQPDVDGLTPLMACNSP CCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCC EIAVCLMNHGANPSLRNDDGQTAYDFHMKNGYPPIAEAIKHWQSKQKKGETR CEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA