Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734917

Identifier: 187734917

GI number: 187734917

Start: 490756

End: 491415

Strand: Direct

Name: 187734917

Synonym: Amuc_0410

Alternate gene names: NA

Gene position: 490756-491415 (Clockwise)

Preceding gene: 187734913

Following gene: 187734918

Centisome position: 18.42

GC content: 62.58

Gene sequence:

>660_bases
ATGCAATCCTCCCCCGACCAGCCCTCATCCGGAGCATGGCTGGGCCTTCCTCCGGATGAAGAACGCCCGGTAAGCCGGGG
CGCCAGGTACCGTTGCATCTTTCTGATGCTCCTGTACTGGGCCGTTCTTTCCGCCATTCCACAAGGCGCGGACCGCCTTG
CAGAAATAGGAACAAATCTCCCTCTCTGGATGGGAGCCCTGGAACTGACTCCCTTCCTGCTGGTGCCGGCCTTCCTGTTC
CTGGCGGTGCGAACAGGCGCCCAATGGAGGGCCTTGATGATAACCGTATATGCGGGCCTGTTCCTGAACCTGCTGATGAA
CATGGCGCTTCCCTCAGGCGCCATGTGGGGAGACCTTCCCGCAGCCGGCCCCTACGGTACGCTTGTCTGGCCCGGAGGGG
ACCACCGGGAATGGCTGGTCACGCTGCCCCGTTTTCCCCAATTCTGGGCTCTCGTCATCTATGTCTTCCTCTCCGGCAGC
GGAACCCCGCCCCTGCTTCGCCTGCTGGCCCTGGCCTGGTGGTTCCTGCTTTGCGTGGCCCCCGTGAACACGGGCATGGT
GGGGTATGCGGACATCCTAGGGCCTCTGGTCATCATCGCCCTCGTCCTCGGCTGCATGCACCTGGCGGAAAAAAGAGCCT
CCCGGCAAAATGACCGCTAA

Upstream 100 bases:

>100_bases
TGCCCGTTTTGTTGAAAAACAATCCCGGTTCCGGATCTGAACCGGGCTTTATTGACAAACCTGCACGTTCCCGTTACAAA
AGCACCATTCCCAACCCGCC

Downstream 100 bases:

>100_bases
CGGGACAAAATCGGCCGTTCTCCCCGGGGAGCGGCCATTCCCGCCTCTGTCAGCCTTTCCTCCATCACTCCGCCGCTACG
GATCCAGCCGGTGGAACATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MQSSPDQPSSGAWLGLPPDEERPVSRGARYRCIFLMLLYWAVLSAIPQGADRLAEIGTNLPLWMGALELTPFLLVPAFLF
LAVRTGAQWRALMITVYAGLFLNLLMNMALPSGAMWGDLPAAGPYGTLVWPGGDHREWLVTLPRFPQFWALVIYVFLSGS
GTPPLLRLLALAWWFLLCVAPVNTGMVGYADILGPLVIIALVLGCMHLAEKRASRQNDR

Sequences:

>Translated_219_residues
MQSSPDQPSSGAWLGLPPDEERPVSRGARYRCIFLMLLYWAVLSAIPQGADRLAEIGTNLPLWMGALELTPFLLVPAFLF
LAVRTGAQWRALMITVYAGLFLNLLMNMALPSGAMWGDLPAAGPYGTLVWPGGDHREWLVTLPRFPQFWALVIYVFLSGS
GTPPLLRLLALAWWFLLCVAPVNTGMVGYADILGPLVIIALVLGCMHLAEKRASRQNDR
>Mature_219_residues
MQSSPDQPSSGAWLGLPPDEERPVSRGARYRCIFLMLLYWAVLSAIPQGADRLAEIGTNLPLWMGALELTPFLLVPAFLF
LAVRTGAQWRALMITVYAGLFLNLLMNMALPSGAMWGDLPAAGPYGTLVWPGGDHREWLVTLPRFPQFWALVIYVFLSGS
GTPPLLRLLALAWWFLLCVAPVNTGMVGYADILGPLVIIALVLGCMHLAEKRASRQNDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24105; Mature: 24105

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSSPDQPSSGAWLGLPPDEERPVSRGARYRCIFLMLLYWAVLSAIPQGADRLAEIGTNL
CCCCCCCCCCCEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
PLWMGALELTPFLLVPAFLFLAVRTGAQWRALMITVYAGLFLNLLMNMALPSGAMWGDLP
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
AAGPYGTLVWPGGDHREWLVTLPRFPQFWALVIYVFLSGSGTPPLLRLLALAWWFLLCVA
CCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
PVNTGMVGYADILGPLVIIALVLGCMHLAEKRASRQNDR
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQSSPDQPSSGAWLGLPPDEERPVSRGARYRCIFLMLLYWAVLSAIPQGADRLAEIGTNL
CCCCCCCCCCCEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
PLWMGALELTPFLLVPAFLFLAVRTGAQWRALMITVYAGLFLNLLMNMALPSGAMWGDLP
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
AAGPYGTLVWPGGDHREWLVTLPRFPQFWALVIYVFLSGSGTPPLLRLLALAWWFLLCVA
CCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
PVNTGMVGYADILGPLVIIALVLGCMHLAEKRASRQNDR
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA