Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734918

Identifier: 187734918

GI number: 187734918

Start: 492113

End: 493555

Strand: Direct

Name: 187734918

Synonym: Amuc_0411

Alternate gene names: NA

Gene position: 492113-493555 (Clockwise)

Preceding gene: 187734917

Following gene: 187734923

Centisome position: 18.47

GC content: 38.32

Gene sequence:

>1443_bases
ATGAATTTTAAAACTATCAGAAAAGTAGGGATTCCTGCGTTGCTGACCGGCACTTTTGTATTGTCGGCAGAAGATTCATC
GGGTGCTCCCACTTATAAAGAAGCGACGATTGCAACTTTGACGGCCAGTCGGGCGAACCTCCAGATGAAAAGAACTTTCG
CGGAACAGGAAAAGCTATTGACCGCCGAACAAAAAAAATTGTGGAAAATATTTAAATCCAGTCCTCATTTTACTTCTATC
TTACCTGAAATTAAATTAAACATGGATATTTCTGGAATTTATGAGTCCACGGGTGGGATTTACATTCCATTTGCCCGTTG
TGAGGATATCGCGGAAACCGACATTACCATCAAAGATCGTTACAGAAAATTTCCTTATAAATCGATTGTCTTTGATCCTG
CGAACCGTGGGTATTATTCCGTTTGTGTCCACTATTTTATAAATAATGATTACATTTTACCAACCTATGATGTCCCTGAT
TTTATCAAATACCATCATGACTGCTATTTTTACACCTCAAAGTCTGAACTAGATAAATTATCGGAACAAGAAAAGAAATA
TATTCAAACGCTGGACAAGGCATTAAATACTATTTACCATAGCATTTATGGGATTGGATACGCAAAAATTGATACTGATA
AATTAAAAAAAGGCCACCTGGCTGCTTATCTTTATAATCATTACAGACTTATTGGTGGAACGGAGTATATAGATAAAAGC
TCACTCCCAAAAGTCCTATGCGCCAATGCTCGACAACAGAGGAAAAAAAACAAGGAAATAATGGCCTCGTGGAAGCGACA
TGTGAAGAAGTTGGAGACAACAACTCCTCGAGAAAGAAATAAAGGAGTAAGGCGCAAGTTTTCTCATTGGATAAAAGAGC
GTTCTGAATTAGAAACCTCTTTCTATGATATTTTGGGGTATCCGATTTCAGTATATGACCTTATAAAATCTTTTGCTGGA
AATTTCTCTTCTTCCCACTATCATATCTGCGGCGGTTGCTTCGGGGAAATTTACTATTCTTCGGGATCAAGTTGCTTACC
TGGATTCACTGGGATACCTTTCCCTGAAGACCTTTCAAAGGACTTTAAAGCGCTTAATGCGATACTTGACCATATTAGAG
AACGACAAGCGATGAATCTTCACATCAGATGTTGGTCGCTTTCTAAAAGAATAAAATATTTGCTGAATGAAAATTTGCCG
CACGGAGGGACCAGACATGAAGCTTATCTGAACGGCTCCCCAGAATTCAGACAAATTTTAGAAGACAAAGTAAATACCGT
CCTCCTATACAATAAGAGACTGTGTTTAAATGCAGATAGAATGACTAAAGAAATGCCTAAATGTATAGCCGATACCAGGG
CATTGGATTCGTATATCAAAAAAAATTATGCCCTGAAAGTGTCGGATCAAAATGCGGCCCAAGCTCAAAATCCCGGCAAA
TAA

Upstream 100 bases:

>100_bases
GTAACTTTCCTGAGTCAAACAGAATTTTCTTCGGTTTCAGCGCTATAGCGGATAGGGAATCCGCCAGAATCAGAACACCT
TAGACAGGAGGTTGGACTTG

Downstream 100 bases:

>100_bases
ACTGTAGGGGTGCGATGTACGGGAAAAAATTTACAATCAGGGAGAGCCATTGAATGAAAGCAGATCTGTTTGCCCACAGG
AGGACAGCCAAGGGAAGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MNFKTIRKVGIPALLTGTFVLSAEDSSGAPTYKEATIATLTASRANLQMKRTFAEQEKLLTAEQKKLWKIFKSSPHFTSI
LPEIKLNMDISGIYESTGGIYIPFARCEDIAETDITIKDRYRKFPYKSIVFDPANRGYYSVCVHYFINNDYILPTYDVPD
FIKYHHDCYFYTSKSELDKLSEQEKKYIQTLDKALNTIYHSIYGIGYAKIDTDKLKKGHLAAYLYNHYRLIGGTEYIDKS
SLPKVLCANARQQRKKNKEIMASWKRHVKKLETTTPRERNKGVRRKFSHWIKERSELETSFYDILGYPISVYDLIKSFAG
NFSSSHYHICGGCFGEIYYSSGSSCLPGFTGIPFPEDLSKDFKALNAILDHIRERQAMNLHIRCWSLSKRIKYLLNENLP
HGGTRHEAYLNGSPEFRQILEDKVNTVLLYNKRLCLNADRMTKEMPKCIADTRALDSYIKKNYALKVSDQNAAQAQNPGK

Sequences:

>Translated_480_residues
MNFKTIRKVGIPALLTGTFVLSAEDSSGAPTYKEATIATLTASRANLQMKRTFAEQEKLLTAEQKKLWKIFKSSPHFTSI
LPEIKLNMDISGIYESTGGIYIPFARCEDIAETDITIKDRYRKFPYKSIVFDPANRGYYSVCVHYFINNDYILPTYDVPD
FIKYHHDCYFYTSKSELDKLSEQEKKYIQTLDKALNTIYHSIYGIGYAKIDTDKLKKGHLAAYLYNHYRLIGGTEYIDKS
SLPKVLCANARQQRKKNKEIMASWKRHVKKLETTTPRERNKGVRRKFSHWIKERSELETSFYDILGYPISVYDLIKSFAG
NFSSSHYHICGGCFGEIYYSSGSSCLPGFTGIPFPEDLSKDFKALNAILDHIRERQAMNLHIRCWSLSKRIKYLLNENLP
HGGTRHEAYLNGSPEFRQILEDKVNTVLLYNKRLCLNADRMTKEMPKCIADTRALDSYIKKNYALKVSDQNAAQAQNPGK
>Mature_480_residues
MNFKTIRKVGIPALLTGTFVLSAEDSSGAPTYKEATIATLTASRANLQMKRTFAEQEKLLTAEQKKLWKIFKSSPHFTSI
LPEIKLNMDISGIYESTGGIYIPFARCEDIAETDITIKDRYRKFPYKSIVFDPANRGYYSVCVHYFINNDYILPTYDVPD
FIKYHHDCYFYTSKSELDKLSEQEKKYIQTLDKALNTIYHSIYGIGYAKIDTDKLKKGHLAAYLYNHYRLIGGTEYIDKS
SLPKVLCANARQQRKKNKEIMASWKRHVKKLETTTPRERNKGVRRKFSHWIKERSELETSFYDILGYPISVYDLIKSFAG
NFSSSHYHICGGCFGEIYYSSGSSCLPGFTGIPFPEDLSKDFKALNAILDHIRERQAMNLHIRCWSLSKRIKYLLNENLP
HGGTRHEAYLNGSPEFRQILEDKVNTVLLYNKRLCLNADRMTKEMPKCIADTRALDSYIKKNYALKVSDQNAAQAQNPGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55285; Mature: 55285

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKTIRKVGIPALLTGTFVLSAEDSSGAPTYKEATIATLTASRANLQMKRTFAEQEKLL
CCCHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
TAEQKKLWKIFKSSPHFTSILPEIKLNMDISGIYESTGGIYIPFARCEDIAETDITIKDR
HHHHHHHHHHHHCCCCHHHHCCCEEECCEEHHHEECCCCEEEEHHHCCCHHHCCCCHHHH
YRKFPYKSIVFDPANRGYYSVCVHYFINNDYILPTYDVPDFIKYHHDCYFYTSKSELDKL
HHHCCCHHEEECCCCCCHHHEEEEEEECCCEEEECCCCHHHHHHCCCEEEEECHHHHHHH
SEQEKKYIQTLDKALNTIYHSIYGIGYAKIDTDKLKKGHLAAYLYNHYRLIGGTEYIDKS
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHCCCHHHHHHHHCEEEECCCHHCCCC
SLPKVLCANARQQRKKNKEIMASWKRHVKKLETTTPRERNKGVRRKFSHWIKERSELETS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FYDILGYPISVYDLIKSFAGNFSSSHYHICGGCFGEIYYSSGSSCLPGFTGIPFPEDLSK
HHHHHCCCHHHHHHHHHHHCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
DFKALNAILDHIRERQAMNLHIRCWSLSKRIKYLLNENLPHGGTRHEAYLNGSPEFRQIL
HHHHHHHHHHHHHHHHHCEEEEEEEHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHH
EDKVNTVLLYNKRLCLNADRMTKEMPKCIADTRALDSYIKKNYALKVSDQNAAQAQNPGK
HHHCCEEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MNFKTIRKVGIPALLTGTFVLSAEDSSGAPTYKEATIATLTASRANLQMKRTFAEQEKLL
CCCHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
TAEQKKLWKIFKSSPHFTSILPEIKLNMDISGIYESTGGIYIPFARCEDIAETDITIKDR
HHHHHHHHHHHHCCCCHHHHCCCEEECCEEHHHEECCCCEEEEHHHCCCHHHCCCCHHHH
YRKFPYKSIVFDPANRGYYSVCVHYFINNDYILPTYDVPDFIKYHHDCYFYTSKSELDKL
HHHCCCHHEEECCCCCCHHHEEEEEEECCCEEEECCCCHHHHHHCCCEEEEECHHHHHHH
SEQEKKYIQTLDKALNTIYHSIYGIGYAKIDTDKLKKGHLAAYLYNHYRLIGGTEYIDKS
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHCCCHHHHHHHHCEEEECCCHHCCCC
SLPKVLCANARQQRKKNKEIMASWKRHVKKLETTTPRERNKGVRRKFSHWIKERSELETS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FYDILGYPISVYDLIKSFAGNFSSSHYHICGGCFGEIYYSSGSSCLPGFTGIPFPEDLSK
HHHHHCCCHHHHHHHHHHHCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
DFKALNAILDHIRERQAMNLHIRCWSLSKRIKYLLNENLPHGGTRHEAYLNGSPEFRQIL
HHHHHHHHHHHHHHHHHCEEEEEEEHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHH
EDKVNTVLLYNKRLCLNADRMTKEMPKCIADTRALDSYIKKNYALKVSDQNAAQAQNPGK
HHHCCEEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA