| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734878
Identifier: 187734878
GI number: 187734878
Start: 438943
End: 439473
Strand: Reverse
Name: 187734878
Synonym: Amuc_0370
Alternate gene names: NA
Gene position: 439473-438943 (Counterclockwise)
Preceding gene: 187734879
Following gene: 187734876
Centisome position: 16.5
GC content: 41.81
Gene sequence:
>531_bases ATGAATAAAATTGCCTGTGCAATAATGGTTTCTCTCTCAGGAATCTGTCTCTTGAAAGGGGAAACAGTGCCGCAGAAGAC GGAATGGAAAGGGGGACGTCTCATTTATGATGGAGTCATCATCAAAAATCAGTTCAATCTGCCTCAAAAAGGAATCAAAT ACCATGATGAGGATAGGTTGTCCTATGATGTCATGGACACCACCATTGAAATGAGCACCACCCTTTCCAAAAATCCTCAA TGCGGCAGGGAATGGTGTTACAAGGGAATCAGCCATATTGTTGTCAAATATTCCGGCCCGATTTCCGATCCGATAGACGG AGGCACCATCTATTTTGAACCATACTATAACCACCATATCTGGTTTGATAAGAAAAAGTATGGGGAATGGGGGATTTTGT ACTCCAAAGTCTATATTATTACCCGAATCAAGAATGCGAATATTGAGGATGTCAGAGACTATGGAATCAGCGGGGAGGAC GGAAGCATCTTTTTCCAGTATGTGGAAAAAGTGGTAGATGATAACATGTAA
Upstream 100 bases:
>100_bases ATCGGGACGATGCGAAGACCCCTCCTGAAAAAACTGTTCAGGAAATGAAAGAATTCCTCAATAAGGAATTGCTGAAACAA CAACAAAGTAGAAAATAACA
Downstream 100 bases:
>100_bases ATTCCGTCTGGCTTTCCCGGATGAAAATCATCTTCCGCCGATTCACGGTTGTTCAGGTTCCGGAGGTTCGCAAGCAACGA CCTCCGGAGCCTTGTTAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MNKIACAIMVSLSGICLLKGETVPQKTEWKGGRLIYDGVIIKNQFNLPQKGIKYHDEDRLSYDVMDTTIEMSTTLSKNPQ CGREWCYKGISHIVVKYSGPISDPIDGGTIYFEPYYNHHIWFDKKKYGEWGILYSKVYIITRIKNANIEDVRDYGISGED GSIFFQYVEKVVDDNM
Sequences:
>Translated_176_residues MNKIACAIMVSLSGICLLKGETVPQKTEWKGGRLIYDGVIIKNQFNLPQKGIKYHDEDRLSYDVMDTTIEMSTTLSKNPQ CGREWCYKGISHIVVKYSGPISDPIDGGTIYFEPYYNHHIWFDKKKYGEWGILYSKVYIITRIKNANIEDVRDYGISGED GSIFFQYVEKVVDDNM >Mature_176_residues MNKIACAIMVSLSGICLLKGETVPQKTEWKGGRLIYDGVIIKNQFNLPQKGIKYHDEDRLSYDVMDTTIEMSTTLSKNPQ CGREWCYKGISHIVVKYSGPISDPIDGGTIYFEPYYNHHIWFDKKKYGEWGILYSKVYIITRIKNANIEDVRDYGISGED GSIFFQYVEKVVDDNM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20257; Mature: 20257
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIACAIMVSLSGICLLKGETVPQKTEWKGGRLIYDGVIIKNQFNLPQKGIKYHDEDRL CCCCEEEEEEECCCEEEEECCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCC SYDVMDTTIEMSTTLSKNPQCGREWCYKGISHIVVKYSGPISDPIDGGTIYFEPYYNHHI EEEEEEEEEEEEECCCCCCCCCHHHHHHCHHEEEEEECCCCCCCCCCCEEEECCCCCCEE WFDKKKYGEWGILYSKVYIITRIKNANIEDVRDYGISGEDGSIFFQYVEKVVDDNM EECCCCCCCCEEEEEEEEEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MNKIACAIMVSLSGICLLKGETVPQKTEWKGGRLIYDGVIIKNQFNLPQKGIKYHDEDRL CCCCEEEEEEECCCEEEEECCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCC SYDVMDTTIEMSTTLSKNPQCGREWCYKGISHIVVKYSGPISDPIDGGTIYFEPYYNHHI EEEEEEEEEEEEECCCCCCCCCHHHHHHCHHEEEEEECCCCCCCCCCCEEEECCCCCCEE WFDKKKYGEWGILYSKVYIITRIKNANIEDVRDYGISGEDGSIFFQYVEKVVDDNM EECCCCCCCCEEEEEEEEEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA