| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734879
Identifier: 187734879
GI number: 187734879
Start: 439476
End: 442052
Strand: Reverse
Name: 187734879
Synonym: Amuc_0371
Alternate gene names: NA
Gene position: 442052-439476 (Counterclockwise)
Preceding gene: 187734880
Following gene: 187734878
Centisome position: 16.59
GC content: 52.66
Gene sequence:
>2577_bases ATGTTGATTAAATTCAAACACTTCGTAGGGACATTTGTGTTGATTTTCCTTTTGTTGGGGGCGTGGGCGGCAGGAAAGGT TGTAACCGTCCAGATACCGGAGCAACTTCCGGAATGTCCGGTCCGTTTTATTCGCGGCACGCTGGTAGCTGGCGACGGCT CCATCTGGGCCGTAGGAGAAAAAGAAAGCATTTACCGCCTTCAGATTGGGGACCGGACATATGAAAAATCGTGGCTTAAT ATGGATTATTATTCCGGTTTCCCCAAAGGAAAGAATTTCACCTGTATCGCGGAGGACAGGCAGGGGCGCATCTGGGCGGG CACGGATGACAGCGGCGTAGCCGTTTTTAACGGAAGGGAATGGAAGATGTATGACCGCAGCAATGCCCTGAATGGAGAGC ATGTTTATGCTTTGGCCATTTCTCCCGTTTCCGGGGAGGTGGCCGTCACCACATCCGGAGGCGTATCCATTTACGATCCT GCAGGCGATTCATGGAAGACGCTGGACAGGTCCACCGGCCTGGTGGAAGACCAGGCGGCTTCCGCAGGTTTTGATACCAG GGGGAATTTGTGGCTGGCCTATGCTTGCGGCGGGGTATCCTGCTCTTCGCGCCAGTCAAAGTATATGCAGTGGAAAAATG TTCAGGCTCCCTGGTACTGGGATAACAGGCAATTCGCCCGTCAGCCGTACCAGCCGTATGGTGATGGTTTGCCTTCCAAT ATCTGCAATGTTTTGACTTGTACGGATAAGGGCCAGGTGTTGGTAGGTACCTGCTCAGGCTTGGCGTACAGTAACGGCAT TAGTTCTTGGCGTTATATGAGAGGGCGTGATTATGCCCAGAAAAACAACCATCTGTATGGTTCTGCCGCACGGAAGACTG CGGTGCCGGGGGAGTCGAATTCCAGAATGTTGTCTGAAGATTTTATTTCTTCCATTATCCAGCAGGAAAAGGAAATTTTC ATCGGCTACCGGATGCAGGGAGTGGATGTTCTGGATGCTGAAAAAATGACGGTGAATCAGAGAATAAGGAAGGGGCTGGA AAACGTGGATGTTCCTTCCTTGCTGGCGCTTCAGGACGGGAGTGTTTGGGCGGCGACATACGGACGGGGCTTTGTTCGTC TGAAAAAGGGGACTCTGGCTTATAAACTGGACAGGGAACAGATGGACAATGAAGTCCCGTTCCCTCGTCCGGCGCAGATG GAGGAGCCTTCTGTGGTGCTCAGAAGGTTGGAAAGGCTGGGGTCCGATGCGCATGCGGGGAAGAATATTGTGTTCCGGGG GGAGGACTGGACTACAAAAGGGGACTGGTGCGGGAAGTACGGGCACACGCGTGCCACGCTGTGCGCCACGAATGCCCCCA TGAGCAATTCCGAATTCAAAGCCAAGCCTATTAAGTTCCGTACTCTTTCTTCCGTTCCCGGACATCCCGGATATAAGGGG GCCTTGTCTCCCTACTGGATTCAGGGGCTGATGGGGCTCAACCGCAAGAAAGGGGACGCTTTGCGCTGGTGGGTGCACAG CATCAAGGAAAATGATAACCGCAACGTTCTTTTCGACCCTACGGATTCCGTGCGGACAGAGGCGGAGTGGGATGACCACG GAGAAGTGTATCCGGGCTTTGTGGACGGACCCGATATATGGGTAGCCGTAGAGGTGCCGGAAGGTGTCCATGAAATAGCC CTGTATTTTTACAATCCCAACGGTTATCTCACCAATGAATCCAGGCGGGATTACGTGGTGGAAGCCAGAAGGCACCCTTC CACCGCTCCCCTTGTGTTCCAGTTCAATATTGAGGGGGATCTTGCGATAGGAGAACAGAATAATTGGGGGAAGGAACTTG CTGCATCCATGGAGCAGTGGTATTCCTACCCGGTGGAGGCGCGCACACGCGTTTCCAGATTTGCGGGGTCCGGGGTTTAT AAAAGGTTCATGAGCAGGAAAGGGGGGATTTACCTGTTCCGTATTTGCCGGAACGGTTCCTTTAATACCATTTTAAACGG CGTGTTTGTGAATGAAAAAATACCGTGGGAAATTCGAATGCCTGAGGAACTGCCTTATTACGTATCCGGTGCTCTGGCCG GTATTGTCCCCACTCCGGAAAGGGTGAGTGGAGCTACTCTGGGACAGAGGGAAAAGGCTGTGTGCAAGCCTCTGTATGAG TTGCAGTATACGCGCAAGTACCTTACTCCGGCTGCGTGCAGTCTTCAGAACAGGTATATTCTTTCCCTGTGGCGGCAGGC CCGGAAGAGTCGGGCCGAGGGTGGTTGTCTGGCGGACTGCCTCCAGTGGGAAGCCAGAGTAAGCGACGACCGTGTGAGAG CTTCCTTCGATGAGACCATGAAGCGTTCTTGGGAGCAGAGCCAGATTTATTATATTGGCAACAGGTCCCGGGATTTCATG CCGAATGCCCCGGGTACTGTTCCTTTTTCTCTCAGCGAATTGCGCCTGATGGCCAAGCTGCGCATCGACTGGAGGCAGTA TCGGGACGATGCGAAGACCCCTCCTGAAAAAACTGTTCAGGAAATGAAAGAATTCCTCAATAAGGAATTGCTGAAACAAC AACAAAGTAGAAAATAA
Upstream 100 bases:
>100_bases CCGTATTTTATTTGGATAAACTTGACAATAAATTGAAAATGGTGTTGACAGTGATAAAAACCGATAATATTATCCTGTAA TAATCAGGAGATAGTTGGTT
Downstream 100 bases:
>100_bases CAATGAATAAAATTGCCTGTGCAATAATGGTTTCTCTCTCAGGAATCTGTCTCTTGAAAGGGGAAACAGTGCCGCAGAAG ACGGAATGGAAAGGGGGACG
Product: two component regulator propeller domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 858; Mature: 858
Protein sequence:
>858_residues MLIKFKHFVGTFVLIFLLLGAWAAGKVVTVQIPEQLPECPVRFIRGTLVAGDGSIWAVGEKESIYRLQIGDRTYEKSWLN MDYYSGFPKGKNFTCIAEDRQGRIWAGTDDSGVAVFNGREWKMYDRSNALNGEHVYALAISPVSGEVAVTTSGGVSIYDP AGDSWKTLDRSTGLVEDQAASAGFDTRGNLWLAYACGGVSCSSRQSKYMQWKNVQAPWYWDNRQFARQPYQPYGDGLPSN ICNVLTCTDKGQVLVGTCSGLAYSNGISSWRYMRGRDYAQKNNHLYGSAARKTAVPGESNSRMLSEDFISSIIQQEKEIF IGYRMQGVDVLDAEKMTVNQRIRKGLENVDVPSLLALQDGSVWAATYGRGFVRLKKGTLAYKLDREQMDNEVPFPRPAQM EEPSVVLRRLERLGSDAHAGKNIVFRGEDWTTKGDWCGKYGHTRATLCATNAPMSNSEFKAKPIKFRTLSSVPGHPGYKG ALSPYWIQGLMGLNRKKGDALRWWVHSIKENDNRNVLFDPTDSVRTEAEWDDHGEVYPGFVDGPDIWVAVEVPEGVHEIA LYFYNPNGYLTNESRRDYVVEARRHPSTAPLVFQFNIEGDLAIGEQNNWGKELAASMEQWYSYPVEARTRVSRFAGSGVY KRFMSRKGGIYLFRICRNGSFNTILNGVFVNEKIPWEIRMPEELPYYVSGALAGIVPTPERVSGATLGQREKAVCKPLYE LQYTRKYLTPAACSLQNRYILSLWRQARKSRAEGGCLADCLQWEARVSDDRVRASFDETMKRSWEQSQIYYIGNRSRDFM PNAPGTVPFSLSELRLMAKLRIDWRQYRDDAKTPPEKTVQEMKEFLNKELLKQQQSRK
Sequences:
>Translated_858_residues MLIKFKHFVGTFVLIFLLLGAWAAGKVVTVQIPEQLPECPVRFIRGTLVAGDGSIWAVGEKESIYRLQIGDRTYEKSWLN MDYYSGFPKGKNFTCIAEDRQGRIWAGTDDSGVAVFNGREWKMYDRSNALNGEHVYALAISPVSGEVAVTTSGGVSIYDP AGDSWKTLDRSTGLVEDQAASAGFDTRGNLWLAYACGGVSCSSRQSKYMQWKNVQAPWYWDNRQFARQPYQPYGDGLPSN ICNVLTCTDKGQVLVGTCSGLAYSNGISSWRYMRGRDYAQKNNHLYGSAARKTAVPGESNSRMLSEDFISSIIQQEKEIF IGYRMQGVDVLDAEKMTVNQRIRKGLENVDVPSLLALQDGSVWAATYGRGFVRLKKGTLAYKLDREQMDNEVPFPRPAQM EEPSVVLRRLERLGSDAHAGKNIVFRGEDWTTKGDWCGKYGHTRATLCATNAPMSNSEFKAKPIKFRTLSSVPGHPGYKG ALSPYWIQGLMGLNRKKGDALRWWVHSIKENDNRNVLFDPTDSVRTEAEWDDHGEVYPGFVDGPDIWVAVEVPEGVHEIA LYFYNPNGYLTNESRRDYVVEARRHPSTAPLVFQFNIEGDLAIGEQNNWGKELAASMEQWYSYPVEARTRVSRFAGSGVY KRFMSRKGGIYLFRICRNGSFNTILNGVFVNEKIPWEIRMPEELPYYVSGALAGIVPTPERVSGATLGQREKAVCKPLYE LQYTRKYLTPAACSLQNRYILSLWRQARKSRAEGGCLADCLQWEARVSDDRVRASFDETMKRSWEQSQIYYIGNRSRDFM PNAPGTVPFSLSELRLMAKLRIDWRQYRDDAKTPPEKTVQEMKEFLNKELLKQQQSRK >Mature_858_residues MLIKFKHFVGTFVLIFLLLGAWAAGKVVTVQIPEQLPECPVRFIRGTLVAGDGSIWAVGEKESIYRLQIGDRTYEKSWLN MDYYSGFPKGKNFTCIAEDRQGRIWAGTDDSGVAVFNGREWKMYDRSNALNGEHVYALAISPVSGEVAVTTSGGVSIYDP AGDSWKTLDRSTGLVEDQAASAGFDTRGNLWLAYACGGVSCSSRQSKYMQWKNVQAPWYWDNRQFARQPYQPYGDGLPSN ICNVLTCTDKGQVLVGTCSGLAYSNGISSWRYMRGRDYAQKNNHLYGSAARKTAVPGESNSRMLSEDFISSIIQQEKEIF IGYRMQGVDVLDAEKMTVNQRIRKGLENVDVPSLLALQDGSVWAATYGRGFVRLKKGTLAYKLDREQMDNEVPFPRPAQM EEPSVVLRRLERLGSDAHAGKNIVFRGEDWTTKGDWCGKYGHTRATLCATNAPMSNSEFKAKPIKFRTLSSVPGHPGYKG ALSPYWIQGLMGLNRKKGDALRWWVHSIKENDNRNVLFDPTDSVRTEAEWDDHGEVYPGFVDGPDIWVAVEVPEGVHEIA LYFYNPNGYLTNESRRDYVVEARRHPSTAPLVFQFNIEGDLAIGEQNNWGKELAASMEQWYSYPVEARTRVSRFAGSGVY KRFMSRKGGIYLFRICRNGSFNTILNGVFVNEKIPWEIRMPEELPYYVSGALAGIVPTPERVSGATLGQREKAVCKPLYE LQYTRKYLTPAACSLQNRYILSLWRQARKSRAEGGCLADCLQWEARVSDDRVRASFDETMKRSWEQSQIYYIGNRSRDFM PNAPGTVPFSLSELRLMAKLRIDWRQYRDDAKTPPEKTVQEMKEFLNKELLKQQQSRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97188; Mature: 97188
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIKFKHFVGTFVLIFLLLGAWAAGKVVTVQIPEQLPECPVRFIRGTLVAGDGSIWAVGE CEEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHCCEEEECCCCEEEECC KESIYRLQIGDRTYEKSWLNMDYYSGFPKGKNFTCIAEDRQGRIWAGTDDSGVAVFNGRE CCCEEEEEECCCCHHHHHCCCHHHCCCCCCCCEEEEEECCCCEEEECCCCCCEEEEECCE WKMYDRSNALNGEHVYALAISPVSGEVAVTTSGGVSIYDPAGDSWKTLDRSTGLVEDQAA EEEECCCCCCCCCEEEEEEEECCCCCEEEEECCCEEEECCCCCCHHHHHCCCCCCCHHHH SAGFDTRGNLWLAYACGGVSCSSRQSKYMQWKNVQAPWYWDNRQFARQPYQPYGDGLPSN CCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCEEECCHHHHCCCCCCCCCCCCHH ICNVLTCTDKGQVLVGTCSGLAYSNGISSWRYMRGRDYAQKNNHLYGSAARKTAVPGESN HCEEEEECCCCCEEEEECCCCEECCCCCHHHHHCCCCHHHHCCEEEECCHHCCCCCCCCC SRMLSEDFISSIIQQEKEIFIGYRMQGVDVLDAEKMTVNQRIRKGLENVDVPSLLALQDG CCHHHHHHHHHHHHHHHHEEEEEEECCCEEECCHHHHHHHHHHHHHCCCCCCCEEEEECC SVWAATYGRGFVRLKKGTLAYKLDREQMDNEVPFPRPAQMEEPSVVLRRLERLGSDAHAG CEEEEECCCCEEEEECCCEEEEECHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC KNIVFRGEDWTTKGDWCGKYGHTRATLCATNAPMSNSEFKAKPIKFRTLSSVPGHPGYKG CEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCC ALSPYWIQGLMGLNRKKGDALRWWVHSIKENDNRNVLFDPTDSVRTEAEWDDHGEVYPGF CCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC VDGPDIWVAVEVPEGVHEIALYFYNPNGYLTNESRRDYVVEARRHPSTAPLVFQFNIEGD CCCCCEEEEEECCCCCEEEEEEEECCCCEECCCCCCCCEEECCCCCCCCCEEEEEECCCC LAIGEQNNWGKELAASMEQWYSYPVEARTRVSRFAGSGVYKRFMSRKGGIYLFRICRNGS EEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEECCCC FNTILNGVFVNEKIPWEIRMPEELPYYVSGALAGIVPTPERVSGATLGQREKAVCKPLYE HHHHEEEEEECCCCCEEEECCCCCCHHHHHHEECCCCCCHHCCCCCCCCCHHHHHHHHHH LQYTRKYLTPAACSLQNRYILSLWRQARKSRAEGGCLADCLQWEARVSDDRVRASFDETM HHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH KRSWEQSQIYYIGNRSRDFMPNAPGTVPFSLSELRLMAKLRIDWRQYRDDAKTPPEKTVQ HCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH EMKEFLNKELLKQQQSRK HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLIKFKHFVGTFVLIFLLLGAWAAGKVVTVQIPEQLPECPVRFIRGTLVAGDGSIWAVGE CEEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHCCEEEECCCCEEEECC KESIYRLQIGDRTYEKSWLNMDYYSGFPKGKNFTCIAEDRQGRIWAGTDDSGVAVFNGRE CCCEEEEEECCCCHHHHHCCCHHHCCCCCCCCEEEEEECCCCEEEECCCCCCEEEEECCE WKMYDRSNALNGEHVYALAISPVSGEVAVTTSGGVSIYDPAGDSWKTLDRSTGLVEDQAA EEEECCCCCCCCCEEEEEEEECCCCCEEEEECCCEEEECCCCCCHHHHHCCCCCCCHHHH SAGFDTRGNLWLAYACGGVSCSSRQSKYMQWKNVQAPWYWDNRQFARQPYQPYGDGLPSN CCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCEEECCHHHHCCCCCCCCCCCCHH ICNVLTCTDKGQVLVGTCSGLAYSNGISSWRYMRGRDYAQKNNHLYGSAARKTAVPGESN HCEEEEECCCCCEEEEECCCCEECCCCCHHHHHCCCCHHHHCCEEEECCHHCCCCCCCCC SRMLSEDFISSIIQQEKEIFIGYRMQGVDVLDAEKMTVNQRIRKGLENVDVPSLLALQDG CCHHHHHHHHHHHHHHHHEEEEEEECCCEEECCHHHHHHHHHHHHHCCCCCCCEEEEECC SVWAATYGRGFVRLKKGTLAYKLDREQMDNEVPFPRPAQMEEPSVVLRRLERLGSDAHAG CEEEEECCCCEEEEECCCEEEEECHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC KNIVFRGEDWTTKGDWCGKYGHTRATLCATNAPMSNSEFKAKPIKFRTLSSVPGHPGYKG CEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCC ALSPYWIQGLMGLNRKKGDALRWWVHSIKENDNRNVLFDPTDSVRTEAEWDDHGEVYPGF CCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC VDGPDIWVAVEVPEGVHEIALYFYNPNGYLTNESRRDYVVEARRHPSTAPLVFQFNIEGD CCCCCEEEEEECCCCCEEEEEEEECCCCEECCCCCCCCEEECCCCCCCCCEEEEEECCCC LAIGEQNNWGKELAASMEQWYSYPVEARTRVSRFAGSGVYKRFMSRKGGIYLFRICRNGS EEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEECCCC FNTILNGVFVNEKIPWEIRMPEELPYYVSGALAGIVPTPERVSGATLGQREKAVCKPLYE HHHHEEEEEECCCCCEEEECCCCCCHHHHHHEECCCCCCHHCCCCCCCCCHHHHHHHHHH LQYTRKYLTPAACSLQNRYILSLWRQARKSRAEGGCLADCLQWEARVSDDRVRASFDETM HHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH KRSWEQSQIYYIGNRSRDFMPNAPGTVPFSLSELRLMAKLRIDWRQYRDDAKTPPEKTVQ HCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH EMKEFLNKELLKQQQSRK HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA