| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734862
Identifier: 187734862
GI number: 187734862
Start: 417915
End: 419204
Strand: Reverse
Name: 187734862
Synonym: Amuc_0354
Alternate gene names: NA
Gene position: 419204-417915 (Counterclockwise)
Preceding gene: 187734865
Following gene: 187734861
Centisome position: 15.74
GC content: 54.57
Gene sequence:
>1290_bases ATGTTCCCGTTTCCTCCTGTTGTCCGTTCTTTCCTGTTTTCCCTGTTTGAAAGGGCATGGCTGAGGGCTGCGTTGTGCTT CTGCCTCTGTACGGCGGTATGCGCCTCCTGCTCCGTGGACAGGCACATGGAAAAAAAGGCGGGGGAATTGATGGCCAGGA TGGATGCCGTTCCCGATTGGCGGCAGCTGCCGCGGAAGGAAATCTCATGGCACCAGGCCCTGGCGATGATGATGGAGCGG AACATTGACTTGAAAAAATCGGAGCAGTCCCTCAAGACGACGAAACGTTCCGTCGTTAATGTTTTTACCCAGATTATCCC CGGAGTCAATCTGGACTGGATGCTGACCAAGGAATTGAGCGACCTGGCCAGGGTGACGGCCAGCGATGTGGAATACAATA CGAACATTCTGTTCAACATGCCGTCCCTCACCCAGATCCCGTTTGATTATTATTCCGCCAAGGCGGCTGTTTATACGGCG GAAAAGACGCTGGAGATGAAAAAAAGGGAGCTGGTGGCCAGATTGTACCAGCAGGTGCTTTCCTACCGGAACGCGCAGAT CAGCTACAATAACCAGCTGAGCTCCCTGCCTTATGACGATGATGGCGTCCAGAAAAAGAAGCTGGACCTGGAACGGGAGC GGAATTTGAATGAGATTTCCCAGGGGTTTGCCGTGTTGCTGGGGAATATGGACGCCCGGTGGCTGGTGAACCCTGAAACG ATGCCCAGGCTGGACTGGGGCAGGTACAGGGCGGCGTCCCGGCAGCTGGATCTGCTGGTGGTGACGATGGTGGCCATGGA GCTGGAAGCTTCCCGCCTCCAGGTGCTGAATGCCAAACTGAAGTTCTTCCCGTCCGTGGATATTAATTTTTACAGCCCAA CCCTGTTTTCCAGCACGGGCGGGACGTACGGCGGTTTTTTTGCGGGAGCGGGCGATATGAAGGTGAACATGAGCCTGCGG GAAGAACTGGATACGCGCCTGACATCCTGGTTCCAGTATAAGTCGGCCAAAGAAAGCCACGAACTGCTGCAGCGCGAAGT GGTGATGGAACTGCAGCGGCGGCGTATCAAGATAGCCGCGTTGCTGGAGAGCCGCAGGAGGTTTGAGCTCTGGCAGGGGG TGCTGATGAAGGAAATCGCGTTCAAGGAGTCCAGATTATCCGTTTCCGGAGATGAATATCTGGAACAGAGGAAGGATATC AGGAAAATGTATGCTGACCTGGATAATGAAGCTTCCAAGAATGCGGAGGTGGAAGCGGCCCTCATCATGGAATATGGCTG GCTGAAGTAA
Upstream 100 bases:
>100_bases CGAATTCCCTGCGCTCCAGGACTTCTTTTTCCTTCTTTCCCCTCCTGCCGTGTTGATGCTTGACTTTTCAGGGGCAGAAG CTATGTAACAAGGGGCCTGT
Downstream 100 bases:
>100_bases GGCGGGGGAGGATGAACAGTCCCTGTGTGACTGCGGGGGCTTCCTTTCTTGATGCTTTCAAGGGCTTGTGCTATGTTCCG GATATGCAAAAAGTTCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MFPFPPVVRSFLFSLFERAWLRAALCFCLCTAVCASCSVDRHMEKKAGELMARMDAVPDWRQLPRKEISWHQALAMMMER NIDLKKSEQSLKTTKRSVVNVFTQIIPGVNLDWMLTKELSDLARVTASDVEYNTNILFNMPSLTQIPFDYYSAKAAVYTA EKTLEMKKRELVARLYQQVLSYRNAQISYNNQLSSLPYDDDGVQKKKLDLERERNLNEISQGFAVLLGNMDARWLVNPET MPRLDWGRYRAASRQLDLLVVTMVAMELEASRLQVLNAKLKFFPSVDINFYSPTLFSSTGGTYGGFFAGAGDMKVNMSLR EELDTRLTSWFQYKSAKESHELLQREVVMELQRRRIKIAALLESRRRFELWQGVLMKEIAFKESRLSVSGDEYLEQRKDI RKMYADLDNEASKNAEVEAALIMEYGWLK
Sequences:
>Translated_429_residues MFPFPPVVRSFLFSLFERAWLRAALCFCLCTAVCASCSVDRHMEKKAGELMARMDAVPDWRQLPRKEISWHQALAMMMER NIDLKKSEQSLKTTKRSVVNVFTQIIPGVNLDWMLTKELSDLARVTASDVEYNTNILFNMPSLTQIPFDYYSAKAAVYTA EKTLEMKKRELVARLYQQVLSYRNAQISYNNQLSSLPYDDDGVQKKKLDLERERNLNEISQGFAVLLGNMDARWLVNPET MPRLDWGRYRAASRQLDLLVVTMVAMELEASRLQVLNAKLKFFPSVDINFYSPTLFSSTGGTYGGFFAGAGDMKVNMSLR EELDTRLTSWFQYKSAKESHELLQREVVMELQRRRIKIAALLESRRRFELWQGVLMKEIAFKESRLSVSGDEYLEQRKDI RKMYADLDNEASKNAEVEAALIMEYGWLK >Mature_429_residues MFPFPPVVRSFLFSLFERAWLRAALCFCLCTAVCASCSVDRHMEKKAGELMARMDAVPDWRQLPRKEISWHQALAMMMER NIDLKKSEQSLKTTKRSVVNVFTQIIPGVNLDWMLTKELSDLARVTASDVEYNTNILFNMPSLTQIPFDYYSAKAAVYTA EKTLEMKKRELVARLYQQVLSYRNAQISYNNQLSSLPYDDDGVQKKKLDLERERNLNEISQGFAVLLGNMDARWLVNPET MPRLDWGRYRAASRQLDLLVVTMVAMELEASRLQVLNAKLKFFPSVDINFYSPTLFSSTGGTYGGFFAGAGDMKVNMSLR EELDTRLTSWFQYKSAKESHELLQREVVMELQRRRIKIAALLESRRRFELWQGVLMKEIAFKESRLSVSGDEYLEQRKDI RKMYADLDNEASKNAEVEAALIMEYGWLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49684; Mature: 49684
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPFPPVVRSFLFSLFERAWLRAALCFCLCTAVCASCSVDRHMEKKAGELMARMDAVPDW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCH RQLPRKEISWHQALAMMMERNIDLKKSEQSLKTTKRSVVNVFTQIIPGVNLDWMLTKELS HHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHH DLARVTASDVEYNTNILFNMPSLTQIPFDYYSAKAAVYTAEKTLEMKKRELVARLYQQVL HHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHCHHHEEEHHHHHHHHHHHHHHHHHHHHH SYRNAQISYNNQLSSLPYDDDGVQKKKLDLERERNLNEISQGFAVLLGNMDARWLVNPET HHCCCCEEECCCCCCCCCCCCCCHHHHHCHHHHCCHHHHHHHHHHHHCCCCCCEEECCCC MPRLDWGRYRAASRQLDLLVVTMVAMELEASRLQVLNAKLKFFPSVDINFYSPTLFSSTG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCC GTYGGFFAGAGDMKVNMSLREELDTRLTSWFQYKSAKESHELLQREVVMELQRRRIKIAA CCCCCCEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLESRRRFELWQGVLMKEIAFKESRLSVSGDEYLEQRKDIRKMYADLDNEASKNAEVEAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH LIMEYGWLK HHHHCCCCC >Mature Secondary Structure MFPFPPVVRSFLFSLFERAWLRAALCFCLCTAVCASCSVDRHMEKKAGELMARMDAVPDW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCH RQLPRKEISWHQALAMMMERNIDLKKSEQSLKTTKRSVVNVFTQIIPGVNLDWMLTKELS HHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHH DLARVTASDVEYNTNILFNMPSLTQIPFDYYSAKAAVYTAEKTLEMKKRELVARLYQQVL HHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHCHHHEEEHHHHHHHHHHHHHHHHHHHHH SYRNAQISYNNQLSSLPYDDDGVQKKKLDLERERNLNEISQGFAVLLGNMDARWLVNPET HHCCCCEEECCCCCCCCCCCCCCHHHHHCHHHHCCHHHHHHHHHHHHCCCCCCEEECCCC MPRLDWGRYRAASRQLDLLVVTMVAMELEASRLQVLNAKLKFFPSVDINFYSPTLFSSTG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCC GTYGGFFAGAGDMKVNMSLREELDTRLTSWFQYKSAKESHELLQREVVMELQRRRIKIAA CCCCCCEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLESRRRFELWQGVLMKEIAFKESRLSVSGDEYLEQRKDIRKMYADLDNEASKNAEVEAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH LIMEYGWLK HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA