| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734861
Identifier: 187734861
GI number: 187734861
Start: 416875
End: 417903
Strand: Reverse
Name: 187734861
Synonym: Amuc_0353
Alternate gene names: NA
Gene position: 417903-416875 (Counterclockwise)
Preceding gene: 187734862
Following gene: 187734858
Centisome position: 15.69
GC content: 57.53
Gene sequence:
>1029_bases ATGAACAGTCCCTGTGTGACTGCGGGGGCTTCCTTTCTTGATGCTTTCAAGGGCTTGTGCTATGTTCCGGATATGCAAAA AGTTCGGCAGCCCGCGGGTACGGCATTGATGATTCTGGCTTTTCCGGCCGCCATTTACGGGGCGTTTCCGTGGGGAATTG CCCTGGGGGCCTTTTTGTTCCTGCTGGGGGTGGTTGTGGCGGCCAGCCGTTTTTCCGCCATAGTCTGGTCATGGTGCCTA TTTTCCCTGGGGATGTATCTGGCGGCTCCTTTTATCTGGATGTGGAATCCGGACTATTTTTTCAGCCGTTCGTTTGACAT TCTGTTGATAAGCGGCTGCCTGGTGGGCAGCCTGGTTCTGCTTGCAATCCGGTTTGCGGTTATTCCCGTGCTGTGGCCCA GGATTTTCCGCCACTTCGTGGAAGGAAGCCCTACGCTGGAGGATCTGGCGCCCGAAAAGGGAAAGACGGTGGCTGAACTG CGGGGCGGCATAGAACGCAGGCAGGTGAATTTCCTGTTCGGGCATGCGGACCGGGAACTGGTAGAAAAATGGGGGAAAAT AGCCCAGGGAATAGCGGCTCTTTCCAGAAGCCGCAAACGGCTGGCAATATGGGCTGCGGGTATTTTCCTGGCTTGGCCCG CAGCCGTGTTTTTCCTTTCCGGGGGGATGGGCGGCGCGCTGGACCGGGATATTGACCGCATGTGGGGAACCCGCCCGTTC CGGGATGGCATGGTGGTTTCCAGCCCTGCGGCGATGAATGCGGCGCGGCGCGTTTTCAGGGATGCCCGGGCGCTGCGTGG CCTGACGATGGAGCAGGCGCGCGCGTGGCTGAGGACGGACCGCAGGAGTGCGGCATTCAAATTGGGCAAGCCCCGTTATG ATTTTGAAAAGGATGAAACCGTGCTGGTGCTTTCAGATGGGAGGGATTCCATCCGCCTGGTGGCGGTTTTCAATGATGCG GGTCAGATTACCCATTCCTGGCCTGAGGAGTATATGACTTTGATGGTCAGGGATCTGGAGAAAAATTGA
Upstream 100 bases:
>100_bases GGAAAATGTATGCTGACCTGGATAATGAAGCTTCCAAGAATGCGGAGGTGGAAGCGGCCCTCATCATGGAATATGGCTGG CTGAAGTAAGGCGGGGGAGG
Downstream 100 bases:
>100_bases ATGCCGGGGCCGGAAGGGGGCATTGCCCGGCAGGGCATCCGGTGATTGCGGAAGGCCCTGCGGTCTTCCGCTACAGCGTG CGCTTTTGCGGAGGCGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MNSPCVTAGASFLDAFKGLCYVPDMQKVRQPAGTALMILAFPAAIYGAFPWGIALGAFLFLLGVVVAASRFSAIVWSWCL FSLGMYLAAPFIWMWNPDYFFSRSFDILLISGCLVGSLVLLAIRFAVIPVLWPRIFRHFVEGSPTLEDLAPEKGKTVAEL RGGIERRQVNFLFGHADRELVEKWGKIAQGIAALSRSRKRLAIWAAGIFLAWPAAVFFLSGGMGGALDRDIDRMWGTRPF RDGMVVSSPAAMNAARRVFRDARALRGLTMEQARAWLRTDRRSAAFKLGKPRYDFEKDETVLVLSDGRDSIRLVAVFNDA GQITHSWPEEYMTLMVRDLEKN
Sequences:
>Translated_342_residues MNSPCVTAGASFLDAFKGLCYVPDMQKVRQPAGTALMILAFPAAIYGAFPWGIALGAFLFLLGVVVAASRFSAIVWSWCL FSLGMYLAAPFIWMWNPDYFFSRSFDILLISGCLVGSLVLLAIRFAVIPVLWPRIFRHFVEGSPTLEDLAPEKGKTVAEL RGGIERRQVNFLFGHADRELVEKWGKIAQGIAALSRSRKRLAIWAAGIFLAWPAAVFFLSGGMGGALDRDIDRMWGTRPF RDGMVVSSPAAMNAARRVFRDARALRGLTMEQARAWLRTDRRSAAFKLGKPRYDFEKDETVLVLSDGRDSIRLVAVFNDA GQITHSWPEEYMTLMVRDLEKN >Mature_342_residues MNSPCVTAGASFLDAFKGLCYVPDMQKVRQPAGTALMILAFPAAIYGAFPWGIALGAFLFLLGVVVAASRFSAIVWSWCL FSLGMYLAAPFIWMWNPDYFFSRSFDILLISGCLVGSLVLLAIRFAVIPVLWPRIFRHFVEGSPTLEDLAPEKGKTVAEL RGGIERRQVNFLFGHADRELVEKWGKIAQGIAALSRSRKRLAIWAAGIFLAWPAAVFFLSGGMGGALDRDIDRMWGTRPF RDGMVVSSPAAMNAARRVFRDARALRGLTMEQARAWLRTDRRSAAFKLGKPRYDFEKDETVLVLSDGRDSIRLVAVFNDA GQITHSWPEEYMTLMVRDLEKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38172; Mature: 38172
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSPCVTAGASFLDAFKGLCYVPDMQKVRQPAGTALMILAFPAAIYGAFPWGIALGAFLF CCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHH LLGVVVAASRFSAIVWSWCLFSLGMYLAAPFIWMWNPDYFFSRSFDILLISGCLVGSLVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHH LAIRFAVIPVLWPRIFRHFVEGSPTLEDLAPEKGKTVAELRGGIERRQVNFLFGHADREL HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHCCHHHHHHHHEECCCCHHH VEKWGKIAQGIAALSRSRKRLAIWAAGIFLAWPAAVFFLSGGMGGALDRDIDRMWGTRPF HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC RDGMVVSSPAAMNAARRVFRDARALRGLTMEQARAWLRTDRRSAAFKLGKPRYDFEKDET CCCEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE VLVLSDGRDSIRLVAVFNDAGQITHSWPEEYMTLMVRDLEKN EEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MNSPCVTAGASFLDAFKGLCYVPDMQKVRQPAGTALMILAFPAAIYGAFPWGIALGAFLF CCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHH LLGVVVAASRFSAIVWSWCLFSLGMYLAAPFIWMWNPDYFFSRSFDILLISGCLVGSLVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHH LAIRFAVIPVLWPRIFRHFVEGSPTLEDLAPEKGKTVAELRGGIERRQVNFLFGHADREL HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHCCHHHHHHHHEECCCCHHH VEKWGKIAQGIAALSRSRKRLAIWAAGIFLAWPAAVFFLSGGMGGALDRDIDRMWGTRPF HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC RDGMVVSSPAAMNAARRVFRDARALRGLTMEQARAWLRTDRRSAAFKLGKPRYDFEKDET CCCEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE VLVLSDGRDSIRLVAVFNDAGQITHSWPEEYMTLMVRDLEKN EEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA