| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734857
Identifier: 187734857
GI number: 187734857
Start: 413055
End: 413852
Strand: Reverse
Name: 187734857
Synonym: Amuc_0349
Alternate gene names: NA
Gene position: 413852-413055 (Counterclockwise)
Preceding gene: 187734858
Following gene: 187734856
Centisome position: 15.53
GC content: 61.4
Gene sequence:
>798_bases ATGAGTCATAAGCCGTCAAAAGCTTATTACGTGGAGGGTGTCCACCGTTTCTGGATCGATGAAGGCTACGTGGTGTGCCG CATTGAATGTTCGGATTATTATGCCCGGCAGGCGCAGAATTTCTGCGGGGGATGCAAGGAAATGGATTTTCTGCTGTATC ATCCGGAACGCCGGGATCTGTGGCTGGTGGAAGTGAAGGATTACCGTTTTGACGCTCGGCCCAAGGTGGGGGAACTGGTC TGCGCCCTGAGCCGCAAGGTTCGGGATACGATGTTCCTCCTCCGGGCCGCTTCCGTGGCCGCTCCGGACGAGGAGCCGGC GGAGGGCATTTCCCTGAGGGATTTTTCCATTCAGGCCTCGGGAGCGGAGACGCTGCATCTGGCTTTTCTGCTGGAAATGG GCATGGGCGGCGTCTGGACGGACGGCGGCCTGCTGGCGAATGTCAAGAACCTGCTGGTGGGGTCCATGCGTTTTCTGGAT GCGGAACTGGTTTGCGCACCCATTACCTATCCCCGCCGCATCGGCCCCTGGCGCGTGACCTCCGCCCACGGGGAGGTGAG CAAGCGGGTGGAAATCCGCCGCGCCAGAAAATTGGCGGAAATCCAGGAGCAGAGGCGGCGGGAGCGGCTGAACGCGCAGG AGGAGGGGGCCTGGCAGGAAAAGAGCCGGGAAGATGCCGGTTCCCATGCGGCCCCGGCGGAAGAAAGGATGCCCCAGTGG AAGCGGCGTCTCCGGCAGCGCATGAACGGAGAAAGCGCGAACCATGAGGGGCGGCGCAGAAAAAGAAAGCGGGAATGA
Upstream 100 bases:
>100_bases GGGGTAAGGGTGTCCTGGGGGGAATCCCTGGAGGACGTGGGACCTGTCGAGTCTCTTGAAGCGGAAATCGAACAGGCGGA CAGGTATTTGAAGCTGAGTT
Downstream 100 bases:
>100_bases GGCCTGCGCCGGTTAAGGCCTTATTGCCGGGAAGAGCCCCGGCCCGGAACGGTGCGGGCCCGTTCTGCGGCGGCTGTATG GCATGTCTCGGAAAAAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MSHKPSKAYYVEGVHRFWIDEGYVVCRIECSDYYARQAQNFCGGCKEMDFLLYHPERRDLWLVEVKDYRFDARPKVGELV CALSRKVRDTMFLLRAASVAAPDEEPAEGISLRDFSIQASGAETLHLAFLLEMGMGGVWTDGGLLANVKNLLVGSMRFLD AELVCAPITYPRRIGPWRVTSAHGEVSKRVEIRRARKLAEIQEQRRRERLNAQEEGAWQEKSREDAGSHAAPAEERMPQW KRRLRQRMNGESANHEGRRRKRKRE
Sequences:
>Translated_265_residues MSHKPSKAYYVEGVHRFWIDEGYVVCRIECSDYYARQAQNFCGGCKEMDFLLYHPERRDLWLVEVKDYRFDARPKVGELV CALSRKVRDTMFLLRAASVAAPDEEPAEGISLRDFSIQASGAETLHLAFLLEMGMGGVWTDGGLLANVKNLLVGSMRFLD AELVCAPITYPRRIGPWRVTSAHGEVSKRVEIRRARKLAEIQEQRRRERLNAQEEGAWQEKSREDAGSHAAPAEERMPQW KRRLRQRMNGESANHEGRRRKRKRE >Mature_264_residues SHKPSKAYYVEGVHRFWIDEGYVVCRIECSDYYARQAQNFCGGCKEMDFLLYHPERRDLWLVEVKDYRFDARPKVGELVC ALSRKVRDTMFLLRAASVAAPDEEPAEGISLRDFSIQASGAETLHLAFLLEMGMGGVWTDGGLLANVKNLLVGSMRFLDA ELVCAPITYPRRIGPWRVTSAHGEVSKRVEIRRARKLAEIQEQRRRERLNAQEEGAWQEKSREDAGSHAAPAEERMPQWK RRLRQRMNGESANHEGRRRKRKRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30636; Mature: 30505
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHKPSKAYYVEGVHRFWIDEGYVVCRIECSDYYARQAQNFCGGCKEMDFLLYHPERRDL CCCCCCCHHHHHHHHHEEECCCEEEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCCCE WLVEVKDYRFDARPKVGELVCALSRKVRDTMFLLRAASVAAPDEEPAEGISLRDFSIQAS EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECC GAETLHLAFLLEMGMGGVWTDGGLLANVKNLLVGSMRFLDAELVCAPITYPRRIGPWRVT CCHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHCHHEEEECCCCCCCCCCEEEE SAHGEVSKRVEIRRARKLAEIQEQRRRERLNAQEEGAWQEKSREDAGSHAAPAEERMPQW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHCCCCCCCCHHHHHHHH KRRLRQRMNGESANHEGRRRKRKRE HHHHHHHHCCCCCCCHHHHHHHCCC >Mature Secondary Structure SHKPSKAYYVEGVHRFWIDEGYVVCRIECSDYYARQAQNFCGGCKEMDFLLYHPERRDL CCCCCCHHHHHHHHHEEECCCEEEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCCCE WLVEVKDYRFDARPKVGELVCALSRKVRDTMFLLRAASVAAPDEEPAEGISLRDFSIQAS EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECC GAETLHLAFLLEMGMGGVWTDGGLLANVKNLLVGSMRFLDAELVCAPITYPRRIGPWRVT CCHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHCHHEEEECCCCCCCCCCEEEE SAHGEVSKRVEIRRARKLAEIQEQRRRERLNAQEEGAWQEKSREDAGSHAAPAEERMPQW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHCCCCCCCCHHHHHHHH KRRLRQRMNGESANHEGRRRKRKRE HHHHHHHHCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA