| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734858
Identifier: 187734858
GI number: 187734858
Start: 413842
End: 414918
Strand: Reverse
Name: 187734858
Synonym: Amuc_0350
Alternate gene names: NA
Gene position: 414918-413842 (Counterclockwise)
Preceding gene: 187734861
Following gene: 187734857
Centisome position: 15.57
GC content: 58.87
Gene sequence:
>1077_bases ATGATACATGACCTACTGGTGAGCGGCGTGACGGTGTTTCCCGGGAGAGAGCATTTTGAGTTTGTTCCGGGAATCAATGT GGTGGTGGGAGGCAATGATTCCGGCAAAAGCCATTTGCTGAAATTATGCTATACCGTGGCCAAGTGGAGCGCTGACGGGG GGAGAAAATCCCTGCCGGAAAAATGGGCGGAGGAGCAGCGGCTCAGAAAAGACCTGATGCGGGTGTTCGCGTCCCGCGGG CTGGCCGGGCTGACGGCCCGGAACCGGGGAAACGCCCATGCGCGCGTGGAGGCCTCCATGGAGGGGGACGGCGTGCCGGA GGGCATGGGGAACCTGGTGTTTGATTTCCAGGCGGGGCATGAAGAGGAGGGGCTGAGCATCCGGGAAATGCCCCGGCGTT TTCTGAACGTGCCGGTGGTGTTCCTGGCAGCGCGGGAGGTGCTGACCATTTATCCGAGTTTTGTGCAGGTGGGAAGCAGA TTCCCCGAATTTCTGGACGGCGGCAGTTGGGACCTCTGCCGTTATCTGGATATGGAGGCGGAAGCGGAGCCCATCAGTAC GGATGCCGGGCGCGTGGTTGCCAGGCTGGAAAAAATCATCGGGGGGAAGGTGGTGAAGCGTGACGGGCGGTTCTTTTTGC AGCGTCCCGGACAGCAGCCGATAGAAATGAGCCTGGTGGCGGAAGGATTCAAAAGGCTGGGAACGCTGAGCTACCTGATC CGGAACGGTTCCGTGAAAAAAGGTTCCGTCCTGTTTTGGGATGAACCGGAAATGAATCTGAACGCCTCCCACCTGCCCGT GCTGGTGAAAACCCTGACGGGGCTTGCCAAGACGGGGGTGCAGGTTATTTTGTCCTCCCACAGCCTGTTCCTGCTGCGGG AGCTGATGATTCAGCTTTCCGAACCCCGCAATGCCATGGTGCAGAGAAAGTTTTTCGGGATGAGCGTGCCGCGGGGGGAA CGTTCCGGGGTAAGGGTGTCCTGGGGGGAATCCCTGGAGGACGTGGGACCTGTCGAGTCTCTTGAAGCGGAAATCGAACA GGCGGACAGGTATTTGAAGCTGAGTTATGAGTCATAA
Upstream 100 bases:
>100_bases CCCGTTGTTTCCGGTGTTTTTCCGGCAGGCTCCCCGGTGGCCGGCAGCTGGCGGCTTTTGTCATTTACGGCCTGCGCTTC TGTGCTACATTGGGAACGGT
Downstream 100 bases:
>100_bases GCCGTCAAAAGCTTATTACGTGGAGGGTGTCCACCGTTTCTGGATCGATGAAGGCTACGTGGTGTGCCGCATTGAATGTT CGGATTATTATGCCCGGCAG
Product: ATP-binding protein
Products: NA
Alternate protein names: DNA Replication And Repair Protein RecF; ABC Transporter Related Protein; ATPase
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MIHDLLVSGVTVFPGREHFEFVPGINVVVGGNDSGKSHLLKLCYTVAKWSADGGRKSLPEKWAEEQRLRKDLMRVFASRG LAGLTARNRGNAHARVEASMEGDGVPEGMGNLVFDFQAGHEEEGLSIREMPRRFLNVPVVFLAAREVLTIYPSFVQVGSR FPEFLDGGSWDLCRYLDMEAEAEPISTDAGRVVARLEKIIGGKVVKRDGRFFLQRPGQQPIEMSLVAEGFKRLGTLSYLI RNGSVKKGSVLFWDEPEMNLNASHLPVLVKTLTGLAKTGVQVILSSHSLFLLRELMIQLSEPRNAMVQRKFFGMSVPRGE RSGVRVSWGESLEDVGPVESLEAEIEQADRYLKLSYES
Sequences:
>Translated_358_residues MIHDLLVSGVTVFPGREHFEFVPGINVVVGGNDSGKSHLLKLCYTVAKWSADGGRKSLPEKWAEEQRLRKDLMRVFASRG LAGLTARNRGNAHARVEASMEGDGVPEGMGNLVFDFQAGHEEEGLSIREMPRRFLNVPVVFLAAREVLTIYPSFVQVGSR FPEFLDGGSWDLCRYLDMEAEAEPISTDAGRVVARLEKIIGGKVVKRDGRFFLQRPGQQPIEMSLVAEGFKRLGTLSYLI RNGSVKKGSVLFWDEPEMNLNASHLPVLVKTLTGLAKTGVQVILSSHSLFLLRELMIQLSEPRNAMVQRKFFGMSVPRGE RSGVRVSWGESLEDVGPVESLEAEIEQADRYLKLSYES >Mature_358_residues MIHDLLVSGVTVFPGREHFEFVPGINVVVGGNDSGKSHLLKLCYTVAKWSADGGRKSLPEKWAEEQRLRKDLMRVFASRG LAGLTARNRGNAHARVEASMEGDGVPEGMGNLVFDFQAGHEEEGLSIREMPRRFLNVPVVFLAAREVLTIYPSFVQVGSR FPEFLDGGSWDLCRYLDMEAEAEPISTDAGRVVARLEKIIGGKVVKRDGRFFLQRPGQQPIEMSLVAEGFKRLGTLSYLI RNGSVKKGSVLFWDEPEMNLNASHLPVLVKTLTGLAKTGVQVILSSHSLFLLRELMIQLSEPRNAMVQRKFFGMSVPRGE RSGVRVSWGESLEDVGPVESLEAEIEQADRYLKLSYES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39806; Mature: 39806
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHDLLVSGVTVFPGREHFEFVPGINVVVGGNDSGKSHLLKLCYTVAKWSADGGRKSLPE CCHHHHHCCEEECCCCCCCEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCH KWAEEQRLRKDLMRVFASRGLAGLTARNRGNAHARVEASMEGDGVPEGMGNLVFDFQAGH HHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCC EEEGLSIREMPRRFLNVPVVFLAAREVLTIYPSFVQVGSRFPEFLDGGSWDLCRYLDMEA CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHCCCC EAEPISTDAGRVVARLEKIIGGKVVKRDGRFFLQRPGQQPIEMSLVAEGFKRLGTLSYLI CCCCCCCCHHHHHHHHHHHHCCEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHH RNGSVKKGSVLFWDEPEMNLNASHLPVLVKTLTGLAKTGVQVILSSHSLFLLRELMIQLS HCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC EPRNAMVQRKFFGMSVPRGERSGVRVSWGESLEDVGPVESLEAEIEQADRYLKLSYES CCHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHCCCHHHHHHHHHHCCCEEEEEECC >Mature Secondary Structure MIHDLLVSGVTVFPGREHFEFVPGINVVVGGNDSGKSHLLKLCYTVAKWSADGGRKSLPE CCHHHHHCCEEECCCCCCCEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCH KWAEEQRLRKDLMRVFASRGLAGLTARNRGNAHARVEASMEGDGVPEGMGNLVFDFQAGH HHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCC EEEGLSIREMPRRFLNVPVVFLAAREVLTIYPSFVQVGSRFPEFLDGGSWDLCRYLDMEA CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHCCCC EAEPISTDAGRVVARLEKIIGGKVVKRDGRFFLQRPGQQPIEMSLVAEGFKRLGTLSYLI CCCCCCCCHHHHHHHHHHHHCCEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHH RNGSVKKGSVLFWDEPEMNLNASHLPVLVKTLTGLAKTGVQVILSSHSLFLLRELMIQLS HCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC EPRNAMVQRKFFGMSVPRGERSGVRVSWGESLEDVGPVESLEAEIEQADRYLKLSYES CCHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHCCCHHHHHHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA