Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734858

Identifier: 187734858

GI number: 187734858

Start: 413842

End: 414918

Strand: Reverse

Name: 187734858

Synonym: Amuc_0350

Alternate gene names: NA

Gene position: 414918-413842 (Counterclockwise)

Preceding gene: 187734861

Following gene: 187734857

Centisome position: 15.57

GC content: 58.87

Gene sequence:

>1077_bases
ATGATACATGACCTACTGGTGAGCGGCGTGACGGTGTTTCCCGGGAGAGAGCATTTTGAGTTTGTTCCGGGAATCAATGT
GGTGGTGGGAGGCAATGATTCCGGCAAAAGCCATTTGCTGAAATTATGCTATACCGTGGCCAAGTGGAGCGCTGACGGGG
GGAGAAAATCCCTGCCGGAAAAATGGGCGGAGGAGCAGCGGCTCAGAAAAGACCTGATGCGGGTGTTCGCGTCCCGCGGG
CTGGCCGGGCTGACGGCCCGGAACCGGGGAAACGCCCATGCGCGCGTGGAGGCCTCCATGGAGGGGGACGGCGTGCCGGA
GGGCATGGGGAACCTGGTGTTTGATTTCCAGGCGGGGCATGAAGAGGAGGGGCTGAGCATCCGGGAAATGCCCCGGCGTT
TTCTGAACGTGCCGGTGGTGTTCCTGGCAGCGCGGGAGGTGCTGACCATTTATCCGAGTTTTGTGCAGGTGGGAAGCAGA
TTCCCCGAATTTCTGGACGGCGGCAGTTGGGACCTCTGCCGTTATCTGGATATGGAGGCGGAAGCGGAGCCCATCAGTAC
GGATGCCGGGCGCGTGGTTGCCAGGCTGGAAAAAATCATCGGGGGGAAGGTGGTGAAGCGTGACGGGCGGTTCTTTTTGC
AGCGTCCCGGACAGCAGCCGATAGAAATGAGCCTGGTGGCGGAAGGATTCAAAAGGCTGGGAACGCTGAGCTACCTGATC
CGGAACGGTTCCGTGAAAAAAGGTTCCGTCCTGTTTTGGGATGAACCGGAAATGAATCTGAACGCCTCCCACCTGCCCGT
GCTGGTGAAAACCCTGACGGGGCTTGCCAAGACGGGGGTGCAGGTTATTTTGTCCTCCCACAGCCTGTTCCTGCTGCGGG
AGCTGATGATTCAGCTTTCCGAACCCCGCAATGCCATGGTGCAGAGAAAGTTTTTCGGGATGAGCGTGCCGCGGGGGGAA
CGTTCCGGGGTAAGGGTGTCCTGGGGGGAATCCCTGGAGGACGTGGGACCTGTCGAGTCTCTTGAAGCGGAAATCGAACA
GGCGGACAGGTATTTGAAGCTGAGTTATGAGTCATAA

Upstream 100 bases:

>100_bases
CCCGTTGTTTCCGGTGTTTTTCCGGCAGGCTCCCCGGTGGCCGGCAGCTGGCGGCTTTTGTCATTTACGGCCTGCGCTTC
TGTGCTACATTGGGAACGGT

Downstream 100 bases:

>100_bases
GCCGTCAAAAGCTTATTACGTGGAGGGTGTCCACCGTTTCTGGATCGATGAAGGCTACGTGGTGTGCCGCATTGAATGTT
CGGATTATTATGCCCGGCAG

Product: ATP-binding protein

Products: NA

Alternate protein names: DNA Replication And Repair Protein RecF; ABC Transporter Related Protein; ATPase

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MIHDLLVSGVTVFPGREHFEFVPGINVVVGGNDSGKSHLLKLCYTVAKWSADGGRKSLPEKWAEEQRLRKDLMRVFASRG
LAGLTARNRGNAHARVEASMEGDGVPEGMGNLVFDFQAGHEEEGLSIREMPRRFLNVPVVFLAAREVLTIYPSFVQVGSR
FPEFLDGGSWDLCRYLDMEAEAEPISTDAGRVVARLEKIIGGKVVKRDGRFFLQRPGQQPIEMSLVAEGFKRLGTLSYLI
RNGSVKKGSVLFWDEPEMNLNASHLPVLVKTLTGLAKTGVQVILSSHSLFLLRELMIQLSEPRNAMVQRKFFGMSVPRGE
RSGVRVSWGESLEDVGPVESLEAEIEQADRYLKLSYES

Sequences:

>Translated_358_residues
MIHDLLVSGVTVFPGREHFEFVPGINVVVGGNDSGKSHLLKLCYTVAKWSADGGRKSLPEKWAEEQRLRKDLMRVFASRG
LAGLTARNRGNAHARVEASMEGDGVPEGMGNLVFDFQAGHEEEGLSIREMPRRFLNVPVVFLAAREVLTIYPSFVQVGSR
FPEFLDGGSWDLCRYLDMEAEAEPISTDAGRVVARLEKIIGGKVVKRDGRFFLQRPGQQPIEMSLVAEGFKRLGTLSYLI
RNGSVKKGSVLFWDEPEMNLNASHLPVLVKTLTGLAKTGVQVILSSHSLFLLRELMIQLSEPRNAMVQRKFFGMSVPRGE
RSGVRVSWGESLEDVGPVESLEAEIEQADRYLKLSYES
>Mature_358_residues
MIHDLLVSGVTVFPGREHFEFVPGINVVVGGNDSGKSHLLKLCYTVAKWSADGGRKSLPEKWAEEQRLRKDLMRVFASRG
LAGLTARNRGNAHARVEASMEGDGVPEGMGNLVFDFQAGHEEEGLSIREMPRRFLNVPVVFLAAREVLTIYPSFVQVGSR
FPEFLDGGSWDLCRYLDMEAEAEPISTDAGRVVARLEKIIGGKVVKRDGRFFLQRPGQQPIEMSLVAEGFKRLGTLSYLI
RNGSVKKGSVLFWDEPEMNLNASHLPVLVKTLTGLAKTGVQVILSSHSLFLLRELMIQLSEPRNAMVQRKFFGMSVPRGE
RSGVRVSWGESLEDVGPVESLEAEIEQADRYLKLSYES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39806; Mature: 39806

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHDLLVSGVTVFPGREHFEFVPGINVVVGGNDSGKSHLLKLCYTVAKWSADGGRKSLPE
CCHHHHHCCEEECCCCCCCEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCH
KWAEEQRLRKDLMRVFASRGLAGLTARNRGNAHARVEASMEGDGVPEGMGNLVFDFQAGH
HHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCC
EEEGLSIREMPRRFLNVPVVFLAAREVLTIYPSFVQVGSRFPEFLDGGSWDLCRYLDMEA
CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHCCCC
EAEPISTDAGRVVARLEKIIGGKVVKRDGRFFLQRPGQQPIEMSLVAEGFKRLGTLSYLI
CCCCCCCCHHHHHHHHHHHHCCEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
RNGSVKKGSVLFWDEPEMNLNASHLPVLVKTLTGLAKTGVQVILSSHSLFLLRELMIQLS
HCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
EPRNAMVQRKFFGMSVPRGERSGVRVSWGESLEDVGPVESLEAEIEQADRYLKLSYES
CCHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHCCCHHHHHHHHHHCCCEEEEEECC
>Mature Secondary Structure
MIHDLLVSGVTVFPGREHFEFVPGINVVVGGNDSGKSHLLKLCYTVAKWSADGGRKSLPE
CCHHHHHCCEEECCCCCCCEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCH
KWAEEQRLRKDLMRVFASRGLAGLTARNRGNAHARVEASMEGDGVPEGMGNLVFDFQAGH
HHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCC
EEEGLSIREMPRRFLNVPVVFLAAREVLTIYPSFVQVGSRFPEFLDGGSWDLCRYLDMEA
CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHCCCC
EAEPISTDAGRVVARLEKIIGGKVVKRDGRFFLQRPGQQPIEMSLVAEGFKRLGTLSYLI
CCCCCCCCHHHHHHHHHHHHCCEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
RNGSVKKGSVLFWDEPEMNLNASHLPVLVKTLTGLAKTGVQVILSSHSLFLLRELMIQLS
HCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
EPRNAMVQRKFFGMSVPRGERSGVRVSWGESLEDVGPVESLEAEIEQADRYLKLSYES
CCHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHCCCHHHHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA