| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734837
Identifier: 187734837
GI number: 187734837
Start: 385486
End: 387501
Strand: Reverse
Name: 187734837
Synonym: Amuc_0328
Alternate gene names: NA
Gene position: 387501-385486 (Counterclockwise)
Preceding gene: 187734838
Following gene: 187734836
Centisome position: 14.55
GC content: 34.57
Gene sequence:
>2016_bases ATGAGTAGACACATTTATCTGCCAGAGCTATTGAGTATAAATATTAAGAATTATACTTTATACCCCAACGGTTTGGATTA CACCTTTGATTTTGTTAAAGGCGTCAATCTTGTGCTAGGTGGTAATGGCATGGGGAAAACTACTTTTGTCAACATTATTC GATATGCAATTCTTGGGTTATACAAAAAGCCTTTCGGATATACTCGTACATACCAAGGAAATATTATAGAAAAACGCCAA CTGTTTCCGCAAAAGTATTTCAGCAATCGCATGGATGACAGCATTCACACGGATGCTTCTCCTACCGTATCAATTAGCAT GAAGATAAACAATGTTACAGTTGATTTGACAAGAGATTTATCCTCCATAACCTTAACCAAACTTAAGGTTGATGGAACAG AAGTATTTGGCACCTTAATCAATCAGTTTAGCTACGAAAAATTATCTGATGCTGCAAAAGTTAATATGTTGCCTTATCTA TATGAGAAAATCATTAAGACTAATACAAATTTAGAATTTGATGATTTAATATTTTTCGTAAACGAGGTACTTTTTTTCGG AGAAGACCACAAGACCATCCTTTGGAATGATGGTGGCTTCTTCCCTGATGTACAAAGCGAACTATTTAACAAATATTTCA ATGACCCTGTTCTCGACAAGAAACGGCAAGAAGCTATTAGAAAAGCTAAATATTTTGATAGTTTGTCTCGTCATAGTTCA GAAGACATGAGAGCTATTAATAAGGTTCTTGGCAAAATGAAGGATACTTCTCCGTCAGCCGACCACTCAACAGCTAATCA AGGGAACACTGCACTTATTCTTATTGATTTAAAGGGAAAGCTTGCAGGAATGGACGCCAAACTGGCATCCATACAAAAAG AACGTGCTTCTAAAAGTCAAGACATATCACTATTGCAGAATGAAATCAACAAAATAAGTTTATCTGCAAATGATATGGAT AAACAGTTAAAACAAATAGAGGAGCAACTAAATAACCATATATGGGAGACTCTACATCCTTCATATCATGTTTTCATAAA GAACATTCAGCTGAACCACATCTGTCCGATGTGCAATCAGCCAAATGATGAATTGGTTGAAAAAGTTGCAAATGACTCAA ATAGTTGTTTTGCTTGTGGCTCTTCAATTAATGAAAACACAGAAACGGATACAATATTAAGAAAACGTTTTGATGAGATA AGCACACATAGAAAAACATTATATCAGTCTATTAATACCAAGAAGCAGACAATACAAAATATAGAGCAACAAATCATTAA CTCAGATACAGAGTTTACTAAGATTGAATTGGAAAGAAGAACGATTCAGCAACAAATCAGGGAACTGGAGTATGAAAATG CTATGTCTGATAATAGTCAAAATTCCATTCAACCATTCCTAGATGAAGTAAATCGTCTGACCCAACAAAAAGAGGCATAC CAAAAACAACGTGACGAGCAGTATAATATCGTGACTTCTATTTCAAACGAAATAGAAGATGTTATAACAGCTAATGTTCA TGCGTTTTCCTCGATTTTTGCCCAATACGCAGGAAAGTTTTTAGGTGTACCTTGCGAGCTGACATACATCAAACAAACTG GAGATACAAACAAGCGTTTTTATCCTGTTATTGATGGGAAAGTCCGGTTTTACGAAGAAGAAATGTCAGAATCACAAAGA TTCTTTGTGGATCATTCTTTTAGAATGAGTATTCTTACATTCTTCTATAGGACTCCGTCTTTTTATATAGTTGAGACACC GGACAGTAGTTTGGATATATCATACGAAAGGAATGCTGCAAGCGTTTTTGCTGAATTCCTAAAGAAGCCCAACTCATTAA TCATAACATCAAACCTGAACAATAGTTTATTTATTGAGCATTTATTGGATCAGGAAAATGTTGATCTTGGTATTGTTGGG TTATTGGATATTGCAAAACAATCTACTATACAGAACACAAGTGAGCAATTAAAATCAATCTATCATCATATTAAAAACAG ATTGGAATTATGCTAG
Upstream 100 bases:
>100_bases TAATAATACCGTGCTACAACTTTATAATTGAAGAAAAAAGTATTTTTGTAATTATATTGGATCTGTTGTATATATAGCCG ATCTTTTTAAAGAAAGTATT
Downstream 100 bases:
>100_bases AAAAGAATTTGATAAGAGCAAATGAAGATATTGTAACAGTCTCAACCATAGCCAAAAGTATGGGTTGGGGGGCGGTTTCA GAACAATCTTTCCAAAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 671; Mature: 670
Protein sequence:
>671_residues MSRHIYLPELLSINIKNYTLYPNGLDYTFDFVKGVNLVLGGNGMGKTTFVNIIRYAILGLYKKPFGYTRTYQGNIIEKRQ LFPQKYFSNRMDDSIHTDASPTVSISMKINNVTVDLTRDLSSITLTKLKVDGTEVFGTLINQFSYEKLSDAAKVNMLPYL YEKIIKTNTNLEFDDLIFFVNEVLFFGEDHKTILWNDGGFFPDVQSELFNKYFNDPVLDKKRQEAIRKAKYFDSLSRHSS EDMRAINKVLGKMKDTSPSADHSTANQGNTALILIDLKGKLAGMDAKLASIQKERASKSQDISLLQNEINKISLSANDMD KQLKQIEEQLNNHIWETLHPSYHVFIKNIQLNHICPMCNQPNDELVEKVANDSNSCFACGSSINENTETDTILRKRFDEI STHRKTLYQSINTKKQTIQNIEQQIINSDTEFTKIELERRTIQQQIRELEYENAMSDNSQNSIQPFLDEVNRLTQQKEAY QKQRDEQYNIVTSISNEIEDVITANVHAFSSIFAQYAGKFLGVPCELTYIKQTGDTNKRFYPVIDGKVRFYEEEMSESQR FFVDHSFRMSILTFFYRTPSFYIVETPDSSLDISYERNAASVFAEFLKKPNSLIITSNLNNSLFIEHLLDQENVDLGIVG LLDIAKQSTIQNTSEQLKSIYHHIKNRLELC
Sequences:
>Translated_671_residues MSRHIYLPELLSINIKNYTLYPNGLDYTFDFVKGVNLVLGGNGMGKTTFVNIIRYAILGLYKKPFGYTRTYQGNIIEKRQ LFPQKYFSNRMDDSIHTDASPTVSISMKINNVTVDLTRDLSSITLTKLKVDGTEVFGTLINQFSYEKLSDAAKVNMLPYL YEKIIKTNTNLEFDDLIFFVNEVLFFGEDHKTILWNDGGFFPDVQSELFNKYFNDPVLDKKRQEAIRKAKYFDSLSRHSS EDMRAINKVLGKMKDTSPSADHSTANQGNTALILIDLKGKLAGMDAKLASIQKERASKSQDISLLQNEINKISLSANDMD KQLKQIEEQLNNHIWETLHPSYHVFIKNIQLNHICPMCNQPNDELVEKVANDSNSCFACGSSINENTETDTILRKRFDEI STHRKTLYQSINTKKQTIQNIEQQIINSDTEFTKIELERRTIQQQIRELEYENAMSDNSQNSIQPFLDEVNRLTQQKEAY QKQRDEQYNIVTSISNEIEDVITANVHAFSSIFAQYAGKFLGVPCELTYIKQTGDTNKRFYPVIDGKVRFYEEEMSESQR FFVDHSFRMSILTFFYRTPSFYIVETPDSSLDISYERNAASVFAEFLKKPNSLIITSNLNNSLFIEHLLDQENVDLGIVG LLDIAKQSTIQNTSEQLKSIYHHIKNRLELC >Mature_670_residues SRHIYLPELLSINIKNYTLYPNGLDYTFDFVKGVNLVLGGNGMGKTTFVNIIRYAILGLYKKPFGYTRTYQGNIIEKRQL FPQKYFSNRMDDSIHTDASPTVSISMKINNVTVDLTRDLSSITLTKLKVDGTEVFGTLINQFSYEKLSDAAKVNMLPYLY EKIIKTNTNLEFDDLIFFVNEVLFFGEDHKTILWNDGGFFPDVQSELFNKYFNDPVLDKKRQEAIRKAKYFDSLSRHSSE DMRAINKVLGKMKDTSPSADHSTANQGNTALILIDLKGKLAGMDAKLASIQKERASKSQDISLLQNEINKISLSANDMDK QLKQIEEQLNNHIWETLHPSYHVFIKNIQLNHICPMCNQPNDELVEKVANDSNSCFACGSSINENTETDTILRKRFDEIS THRKTLYQSINTKKQTIQNIEQQIINSDTEFTKIELERRTIQQQIRELEYENAMSDNSQNSIQPFLDEVNRLTQQKEAYQ KQRDEQYNIVTSISNEIEDVITANVHAFSSIFAQYAGKFLGVPCELTYIKQTGDTNKRFYPVIDGKVRFYEEEMSESQRF FVDHSFRMSILTFFYRTPSFYIVETPDSSLDISYERNAASVFAEFLKKPNSLIITSNLNNSLFIEHLLDQENVDLGIVGL LDIAKQSTIQNTSEQLKSIYHHIKNRLELC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77294; Mature: 77163
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHIYLPELLSINIKNYTLYPNGLDYTFDFVKGVNLVLGGNGMGKTTFVNIIRYAILGL CCCCCCCCHHHEEEEEEEEECCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHH YKKPFGYTRTYQGNIIEKRQLFPQKYFSNRMDDSIHTDASPTVSISMKINNVTVDLTRDL HHCCCCCCEECCCCCHHHHHHCHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCC SSITLTKLKVDGTEVFGTLINQFSYEKLSDAAKVNMLPYLYEKIIKTNTNLEFDDLIFFV CCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH NEVLFFGEDHKTILWNDGGFFPDVQSELFNKYFNDPVLDKKRQEAIRKAKYFDSLSRHSS HHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCH EDMRAINKVLGKMKDTSPSADHSTANQGNTALILIDLKGKLAGMDAKLASIQKERASKSQ HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCHH DISLLQNEINKISLSANDMDKQLKQIEEQLNNHIWETLHPSYHVFIKNIQLNHICPMCNQ HHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCC PNDELVEKVANDSNSCFACGSSINENTETDTILRKRFDEISTHRKTLYQSINTKKQTIQN CCHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH IEQQIINSDTEFTKIELERRTIQQQIRELEYENAMSDNSQNSIQPFLDEVNRLTQQKEAY HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH QKQRDEQYNIVTSISNEIEDVITANVHAFSSIFAQYAGKFLGVPCELTYIKQTGDTNKRF HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEE YPVIDGKVRFYEEEMSESQRFFVDHSFRMSILTFFYRTPSFYIVETPDSSLDISYERNAA EEEECCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCHH SVFAEFLKKPNSLIITSNLNNSLFIEHLLDQENVDLGIVGLLDIAKQSTIQNTSEQLKSI HHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH YHHIKNRLELC HHHHHHHHCCC >Mature Secondary Structure SRHIYLPELLSINIKNYTLYPNGLDYTFDFVKGVNLVLGGNGMGKTTFVNIIRYAILGL CCCCCCCHHHEEEEEEEEECCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHH YKKPFGYTRTYQGNIIEKRQLFPQKYFSNRMDDSIHTDASPTVSISMKINNVTVDLTRDL HHCCCCCCEECCCCCHHHHHHCHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCC SSITLTKLKVDGTEVFGTLINQFSYEKLSDAAKVNMLPYLYEKIIKTNTNLEFDDLIFFV CCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH NEVLFFGEDHKTILWNDGGFFPDVQSELFNKYFNDPVLDKKRQEAIRKAKYFDSLSRHSS HHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCH EDMRAINKVLGKMKDTSPSADHSTANQGNTALILIDLKGKLAGMDAKLASIQKERASKSQ HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCHH DISLLQNEINKISLSANDMDKQLKQIEEQLNNHIWETLHPSYHVFIKNIQLNHICPMCNQ HHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCC PNDELVEKVANDSNSCFACGSSINENTETDTILRKRFDEISTHRKTLYQSINTKKQTIQN CCHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH IEQQIINSDTEFTKIELERRTIQQQIRELEYENAMSDNSQNSIQPFLDEVNRLTQQKEAY HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH QKQRDEQYNIVTSISNEIEDVITANVHAFSSIFAQYAGKFLGVPCELTYIKQTGDTNKRF HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEE YPVIDGKVRFYEEEMSESQRFFVDHSFRMSILTFFYRTPSFYIVETPDSSLDISYERNAA EEEECCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCHH SVFAEFLKKPNSLIITSNLNNSLFIEHLLDQENVDLGIVGLLDIAKQSTIQNTSEQLKSI HHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH YHHIKNRLELC HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA