| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734836
Identifier: 187734836
GI number: 187734836
Start: 384905
End: 385492
Strand: Reverse
Name: 187734836
Synonym: Amuc_0327
Alternate gene names: NA
Gene position: 385492-384905 (Counterclockwise)
Preceding gene: 187734837
Following gene: 187734835
Centisome position: 14.47
GC content: 33.33
Gene sequence:
>588_bases ATGCTAGAAAAGAATTTGATAAGAGCAAATGAAGATATTGTAACAGTCTCAACCATAGCCAAAAGTATGGGTTGGGGGGC GGTTTCAGAACAATCTTTCCAAAGAATATTGTATTTGGTACAAGTTCTCTATTCATTCAAGCATGAAGGAGAAAATATAT TTTCATATTACCATTTTACAGTAACAACTTTCGGTCCATATTCAGATTTGATTGAACGGAGTTTAGTTTTCCTAAGAAGT TCTTTAAAATTACGTGAAGAGGAGGGTGGATTGGTTTTATGTTCTAAGAAGGAGATTCCTTTGAATCAAGAAAAAGTTGA ATGGCTGAAAACTATTATGTATATGTTAGGCAAATACGGCGAAAAACGATTATTTGGTTTCATCGTTAATGACCCATCTT ATGAAAACGCATCTCAAACTAACAATATTGATGGCATAGATACATCATCACCAGATAGCGAAACACTAAAAGTCCTCAAA GATTTCAAAATCGCTTTTGAACAAACTCTTGACGACGCATCAGCTATCAGCGATGAAAAATACATAGAGTTATATTTTGA GTATGTTTTTAGCGAAATTATAAAGTAG
Upstream 100 bases:
>100_bases GTATTGTTGGGTTATTGGATATTGCAAAACAATCTACTATACAGAACACAAGTGAGCAATTAAAATCAATCTATCATCAT ATTAAAAACAGATTGGAATT
Downstream 100 bases:
>100_bases CAGGTTATGAAAACAAGATTCAGCCAAAATGCAAACTTTAAAGATTTGCTAAAACGTAATCAAGAAGCTATAGTGGACGC GGCATTGAATGGATTGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MLEKNLIRANEDIVTVSTIAKSMGWGAVSEQSFQRILYLVQVLYSFKHEGENIFSYYHFTVTTFGPYSDLIERSLVFLRS SLKLREEEGGLVLCSKKEIPLNQEKVEWLKTIMYMLGKYGEKRLFGFIVNDPSYENASQTNNIDGIDTSSPDSETLKVLK DFKIAFEQTLDDASAISDEKYIELYFEYVFSEIIK
Sequences:
>Translated_195_residues MLEKNLIRANEDIVTVSTIAKSMGWGAVSEQSFQRILYLVQVLYSFKHEGENIFSYYHFTVTTFGPYSDLIERSLVFLRS SLKLREEEGGLVLCSKKEIPLNQEKVEWLKTIMYMLGKYGEKRLFGFIVNDPSYENASQTNNIDGIDTSSPDSETLKVLK DFKIAFEQTLDDASAISDEKYIELYFEYVFSEIIK >Mature_195_residues MLEKNLIRANEDIVTVSTIAKSMGWGAVSEQSFQRILYLVQVLYSFKHEGENIFSYYHFTVTTFGPYSDLIERSLVFLRS SLKLREEEGGLVLCSKKEIPLNQEKVEWLKTIMYMLGKYGEKRLFGFIVNDPSYENASQTNNIDGIDTSSPDSETLKVLK DFKIAFEQTLDDASAISDEKYIELYFEYVFSEIIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22514; Mature: 22514
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEKNLIRANEDIVTVSTIAKSMGWGAVSEQSFQRILYLVQVLYSFKHEGENIFSYYHFT CCCCCCCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE VTTFGPYSDLIERSLVFLRSSLKLREEEGGLVLCSKKEIPLNQEKVEWLKTIMYMLGKYG EEECCCHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCC EKRLFGFIVNDPSYENASQTNNIDGIDTSSPDSETLKVLKDFKIAFEQTLDDASAISDEK CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH YIELYFEYVFSEIIK HHHHHHHHHHHHHCC >Mature Secondary Structure MLEKNLIRANEDIVTVSTIAKSMGWGAVSEQSFQRILYLVQVLYSFKHEGENIFSYYHFT CCCCCCCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE VTTFGPYSDLIERSLVFLRSSLKLREEEGGLVLCSKKEIPLNQEKVEWLKTIMYMLGKYG EEECCCHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCC EKRLFGFIVNDPSYENASQTNNIDGIDTSSPDSETLKVLKDFKIAFEQTLDDASAISDEK CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH YIELYFEYVFSEIIK HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA