Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734836

Identifier: 187734836

GI number: 187734836

Start: 384905

End: 385492

Strand: Reverse

Name: 187734836

Synonym: Amuc_0327

Alternate gene names: NA

Gene position: 385492-384905 (Counterclockwise)

Preceding gene: 187734837

Following gene: 187734835

Centisome position: 14.47

GC content: 33.33

Gene sequence:

>588_bases
ATGCTAGAAAAGAATTTGATAAGAGCAAATGAAGATATTGTAACAGTCTCAACCATAGCCAAAAGTATGGGTTGGGGGGC
GGTTTCAGAACAATCTTTCCAAAGAATATTGTATTTGGTACAAGTTCTCTATTCATTCAAGCATGAAGGAGAAAATATAT
TTTCATATTACCATTTTACAGTAACAACTTTCGGTCCATATTCAGATTTGATTGAACGGAGTTTAGTTTTCCTAAGAAGT
TCTTTAAAATTACGTGAAGAGGAGGGTGGATTGGTTTTATGTTCTAAGAAGGAGATTCCTTTGAATCAAGAAAAAGTTGA
ATGGCTGAAAACTATTATGTATATGTTAGGCAAATACGGCGAAAAACGATTATTTGGTTTCATCGTTAATGACCCATCTT
ATGAAAACGCATCTCAAACTAACAATATTGATGGCATAGATACATCATCACCAGATAGCGAAACACTAAAAGTCCTCAAA
GATTTCAAAATCGCTTTTGAACAAACTCTTGACGACGCATCAGCTATCAGCGATGAAAAATACATAGAGTTATATTTTGA
GTATGTTTTTAGCGAAATTATAAAGTAG

Upstream 100 bases:

>100_bases
GTATTGTTGGGTTATTGGATATTGCAAAACAATCTACTATACAGAACACAAGTGAGCAATTAAAATCAATCTATCATCAT
ATTAAAAACAGATTGGAATT

Downstream 100 bases:

>100_bases
CAGGTTATGAAAACAAGATTCAGCCAAAATGCAAACTTTAAAGATTTGCTAAAACGTAATCAAGAAGCTATAGTGGACGC
GGCATTGAATGGATTGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MLEKNLIRANEDIVTVSTIAKSMGWGAVSEQSFQRILYLVQVLYSFKHEGENIFSYYHFTVTTFGPYSDLIERSLVFLRS
SLKLREEEGGLVLCSKKEIPLNQEKVEWLKTIMYMLGKYGEKRLFGFIVNDPSYENASQTNNIDGIDTSSPDSETLKVLK
DFKIAFEQTLDDASAISDEKYIELYFEYVFSEIIK

Sequences:

>Translated_195_residues
MLEKNLIRANEDIVTVSTIAKSMGWGAVSEQSFQRILYLVQVLYSFKHEGENIFSYYHFTVTTFGPYSDLIERSLVFLRS
SLKLREEEGGLVLCSKKEIPLNQEKVEWLKTIMYMLGKYGEKRLFGFIVNDPSYENASQTNNIDGIDTSSPDSETLKVLK
DFKIAFEQTLDDASAISDEKYIELYFEYVFSEIIK
>Mature_195_residues
MLEKNLIRANEDIVTVSTIAKSMGWGAVSEQSFQRILYLVQVLYSFKHEGENIFSYYHFTVTTFGPYSDLIERSLVFLRS
SLKLREEEGGLVLCSKKEIPLNQEKVEWLKTIMYMLGKYGEKRLFGFIVNDPSYENASQTNNIDGIDTSSPDSETLKVLK
DFKIAFEQTLDDASAISDEKYIELYFEYVFSEIIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22514; Mature: 22514

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS00599 AA_TRANSFER_CLASS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKNLIRANEDIVTVSTIAKSMGWGAVSEQSFQRILYLVQVLYSFKHEGENIFSYYHFT
CCCCCCCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
VTTFGPYSDLIERSLVFLRSSLKLREEEGGLVLCSKKEIPLNQEKVEWLKTIMYMLGKYG
EEECCCHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCC
EKRLFGFIVNDPSYENASQTNNIDGIDTSSPDSETLKVLKDFKIAFEQTLDDASAISDEK
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
YIELYFEYVFSEIIK
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MLEKNLIRANEDIVTVSTIAKSMGWGAVSEQSFQRILYLVQVLYSFKHEGENIFSYYHFT
CCCCCCCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
VTTFGPYSDLIERSLVFLRSSLKLREEEGGLVLCSKKEIPLNQEKVEWLKTIMYMLGKYG
EEECCCHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCC
EKRLFGFIVNDPSYENASQTNNIDGIDTSSPDSETLKVLKDFKIAFEQTLDDASAISDEK
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
YIELYFEYVFSEIIK
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA