Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734835

Identifier: 187734835

GI number: 187734835

Start: 383783

End: 384898

Strand: Reverse

Name: 187734835

Synonym: Amuc_0326

Alternate gene names: NA

Gene position: 384898-383783 (Counterclockwise)

Preceding gene: 187734836

Following gene: 187734834

Centisome position: 14.45

GC content: 34.32

Gene sequence:

>1116_bases
ATGAAAACAAGATTCAGCCAAAATGCAAACTTTAAAGATTTGCTAAAACGTAATCAAGAAGCTATAGTGGACGCGGCATT
GAATGGATTGGAAGCTACTGACAATTTCAAGCTTATGCAGTCGCTCATAAAAACAATGTGCGATAAACACCCAGACAATA
GTTTTAAGTATATTGTCATATCAGAAGAAGACTTACAGAATCTTACAAATAATGCAGATAGTGCTATTGAACAGTTGTTT
ACAGACCCAACGTTTGTTCAGAATCGCCACATTGTCATTGATTCTAATTTTAATATTCAAGAATTTGATAACGAATTGCA
CAAAGATAACAACGAAACTAGACGTATTTTCACACAAATGTCAAAGAATGGTATCGTTGTATTTATGGTGACTTCAGAAG
GCATTATTAATTATTTTGTTAACGGCCGCGACGGTGGTGATTCCATTTTTTATGAAAGCTCGGCCTTACACTCATTCAAT
AGTAAAAAGCCTATTTCAGAATTGCCGAGAGTACTTGAGGAATATAGAAAACACTTAAAACTCAGAGATACCTATTCTAA
ATTCTTTGTTGAGAAAAGTCATTTAAAATCTTTACGAACCGATTTGAAATCAGAACTTAATGAAGAACAGTTTATCAAAG
CCAATAAGCAATTACTCAGAAATACTCCAGAAGATTGTTTTAGGGATGATTTACGTATGTTCTTAAAGGAAAAATTAAAA
GTTTTCTTCGTGCAGAAAGAGGTCATGTTAGAAAGTTTGAAGAGATTGGATATTGCTATGATTGATGAAGATGGCGAGGG
ATTGTATTTTATAGAAGTCAAGTGGGTAGGTACTAGTGTTCATCATTTAGGCAAGAAAATAGGAACCACATATAGTGCCA
AACCGCGTATTGTCCCTGATGCATTTAAACAATCAACCTCTTACATAACAGAATTGTTGGCCGAGGAAAAAGATTTCAAG
TTGGGGTATTTAGCAGTATTTGATGCTAGAGACGAAGAACTTCCTGACACAGGAATAGACATGACCATCGATCAAATACC
TAAGAAAGATAGACCAGCTTATTACAGACACATTAAATTAGATGATTTTAGAGTAATAAATGAACATCCCAACTGA

Upstream 100 bases:

>100_bases
TTTTGAACAAACTCTTGACGACGCATCAGCTATCAGCGATGAAAAATACATAGAGTTATATTTTGAGTATGTTTTTAGCG
AAATTATAAAGTAGCAGGTT

Downstream 100 bases:

>100_bases
ATAATTAACAACTATGTACAAAGACTATAAATTCATAGATTGCACAGAAAAATACCATTCGGTTATGCAATTTGACAAAA
ACAAGAATGTTTTTGTACAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MKTRFSQNANFKDLLKRNQEAIVDAALNGLEATDNFKLMQSLIKTMCDKHPDNSFKYIVISEEDLQNLTNNADSAIEQLF
TDPTFVQNRHIVIDSNFNIQEFDNELHKDNNETRRIFTQMSKNGIVVFMVTSEGIINYFVNGRDGGDSIFYESSALHSFN
SKKPISELPRVLEEYRKHLKLRDTYSKFFVEKSHLKSLRTDLKSELNEEQFIKANKQLLRNTPEDCFRDDLRMFLKEKLK
VFFVQKEVMLESLKRLDIAMIDEDGEGLYFIEVKWVGTSVHHLGKKIGTTYSAKPRIVPDAFKQSTSYITELLAEEKDFK
LGYLAVFDARDEELPDTGIDMTIDQIPKKDRPAYYRHIKLDDFRVINEHPN

Sequences:

>Translated_371_residues
MKTRFSQNANFKDLLKRNQEAIVDAALNGLEATDNFKLMQSLIKTMCDKHPDNSFKYIVISEEDLQNLTNNADSAIEQLF
TDPTFVQNRHIVIDSNFNIQEFDNELHKDNNETRRIFTQMSKNGIVVFMVTSEGIINYFVNGRDGGDSIFYESSALHSFN
SKKPISELPRVLEEYRKHLKLRDTYSKFFVEKSHLKSLRTDLKSELNEEQFIKANKQLLRNTPEDCFRDDLRMFLKEKLK
VFFVQKEVMLESLKRLDIAMIDEDGEGLYFIEVKWVGTSVHHLGKKIGTTYSAKPRIVPDAFKQSTSYITELLAEEKDFK
LGYLAVFDARDEELPDTGIDMTIDQIPKKDRPAYYRHIKLDDFRVINEHPN
>Mature_371_residues
MKTRFSQNANFKDLLKRNQEAIVDAALNGLEATDNFKLMQSLIKTMCDKHPDNSFKYIVISEEDLQNLTNNADSAIEQLF
TDPTFVQNRHIVIDSNFNIQEFDNELHKDNNETRRIFTQMSKNGIVVFMVTSEGIINYFVNGRDGGDSIFYESSALHSFN
SKKPISELPRVLEEYRKHLKLRDTYSKFFVEKSHLKSLRTDLKSELNEEQFIKANKQLLRNTPEDCFRDDLRMFLKEKLK
VFFVQKEVMLESLKRLDIAMIDEDGEGLYFIEVKWVGTSVHHLGKKIGTTYSAKPRIVPDAFKQSTSYITELLAEEKDFK
LGYLAVFDARDEELPDTGIDMTIDQIPKKDRPAYYRHIKLDDFRVINEHPN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43266; Mature: 43266

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRFSQNANFKDLLKRNQEAIVDAALNGLEATDNFKLMQSLIKTMCDKHPDNSFKYIVI
CCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEE
SEEDLQNLTNNADSAIEQLFTDPTFVQNRHIVIDSNFNIQEFDNELHKDNNETRRIFTQM
CHHHHHHHHCCHHHHHHHHHCCCCEECCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHH
SKNGIVVFMVTSEGIINYFVNGRDGGDSIFYESSALHSFNSKKPISELPRVLEEYRKHLK
CCCCEEEEEEECCCEEEEEECCCCCCCCEEEECHHHHCCCCCCCHHHHHHHHHHHHHHHH
LRDTYSKFFVEKSHLKSLRTDLKSELNEEQFIKANKQLLRNTPEDCFRDDLRMFLKEKLK
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VFFVQKEVMLESLKRLDIAMIDEDGEGLYFIEVKWVGTSVHHLGKKIGTTYSAKPRIVPD
HHHHHHHHHHHHHHHCCEEEEECCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCHH
AFKQSTSYITELLAEEKDFKLGYLAVFDARDEELPDTGIDMTIDQIPKKDRPAYYRHIKL
HHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEC
DDFRVINEHPN
CCEEECCCCCC
>Mature Secondary Structure
MKTRFSQNANFKDLLKRNQEAIVDAALNGLEATDNFKLMQSLIKTMCDKHPDNSFKYIVI
CCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEE
SEEDLQNLTNNADSAIEQLFTDPTFVQNRHIVIDSNFNIQEFDNELHKDNNETRRIFTQM
CHHHHHHHHCCHHHHHHHHHCCCCEECCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHH
SKNGIVVFMVTSEGIINYFVNGRDGGDSIFYESSALHSFNSKKPISELPRVLEEYRKHLK
CCCCEEEEEEECCCEEEEEECCCCCCCCEEEECHHHHCCCCCCCHHHHHHHHHHHHHHHH
LRDTYSKFFVEKSHLKSLRTDLKSELNEEQFIKANKQLLRNTPEDCFRDDLRMFLKEKLK
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VFFVQKEVMLESLKRLDIAMIDEDGEGLYFIEVKWVGTSVHHLGKKIGTTYSAKPRIVPD
HHHHHHHHHHHHHHHCCEEEEECCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCHH
AFKQSTSYITELLAEEKDFKLGYLAVFDARDEELPDTGIDMTIDQIPKKDRPAYYRHIKL
HHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEC
DDFRVINEHPN
CCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA