| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734821
Identifier: 187734821
GI number: 187734821
Start: 366316
End: 366726
Strand: Reverse
Name: 187734821
Synonym: Amuc_0310
Alternate gene names: NA
Gene position: 366726-366316 (Counterclockwise)
Preceding gene: 187734832
Following gene: 187734820
Centisome position: 13.77
GC content: 55.47
Gene sequence:
>411_bases ATGCCCTTTGTCAGAACGCGCCAGGTAGCTTTTCATGATACGGATGCTTCCGGGGTGGCCCATTTCTCCCGGCTGCTTTG TTTGGTGGAAGAAGTGGAGCACGAGTACCTGCGTTCCCGGGGGGTGGAGGTTCTTTCCCCAGACTGCGGCTGGCCCCGCG TGCATGTGGAGGCGGATTACTCCAGCTCTGCGGGGCTGGGAGATTGGCTGAGCATAGAATTAAGCCTGGGAACGGTGGGA ACCAGTTCTCTGGAATGGAAATTTGCTGTATTTCATTCCGAGCGTCCGGTGATGAGGGGAAGATATGTAGTCGTCCGTGT GGGGAAGGGCGGCAAACCTCAGGCAATTCCGGAATCGGAGAGGGAATGCCTGATTTCAGGCTTTTCAAAAGGAGGGGATG CCTGTAAATAA
Upstream 100 bases:
>100_bases TCACAAATCAAGCTGATGTGACACATTGTCGCGCATTTGCGGCTGGACATGGTTCCGGGGGAGGAGGCAGGATGACGGCA TGCCTGAAGATTTTCCCTGC
Downstream 100 bases:
>100_bases AGCCTATGTCTTCTAAAAAGCCTGTCGTTCTTGTTATTCGCGACGGCTGGGGCCGCAATCCGTTGGGGCCTGATGTCGCG AAAGAGTACGGTGACGCCAC
Product: thioesterase
Products: 4-hydroxybenzoate; CoA
Alternate protein names: 4-Hydroxybenzoyl-CoA Thioesterase
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MPFVRTRQVAFHDTDASGVAHFSRLLCLVEEVEHEYLRSRGVEVLSPDCGWPRVHVEADYSSSAGLGDWLSIELSLGTVG TSSLEWKFAVFHSERPVMRGRYVVVRVGKGGKPQAIPESERECLISGFSKGGDACK
Sequences:
>Translated_136_residues MPFVRTRQVAFHDTDASGVAHFSRLLCLVEEVEHEYLRSRGVEVLSPDCGWPRVHVEADYSSSAGLGDWLSIELSLGTVG TSSLEWKFAVFHSERPVMRGRYVVVRVGKGGKPQAIPESERECLISGFSKGGDACK >Mature_135_residues PFVRTRQVAFHDTDASGVAHFSRLLCLVEEVEHEYLRSRGVEVLSPDCGWPRVHVEADYSSSAGLGDWLSIELSLGTVGT SSLEWKFAVFHSERPVMRGRYVVVRVGKGGKPQAIPESERECLISGFSKGGDACK
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.2.23
Molecular weight: Translated: 14996; Mature: 14865
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFVRTRQVAFHDTDASGVAHFSRLLCLVEEVEHEYLRSRGVEVLSPDCGWPRVHVEADY CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECC SSSAGLGDWLSIELSLGTVGTSSLEWKFAVFHSERPVMRGRYVVVRVGKGGKPQAIPESE CCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCC RECLISGFSKGGDACK HHHHHHCCCCCCCCCC >Mature Secondary Structure PFVRTRQVAFHDTDASGVAHFSRLLCLVEEVEHEYLRSRGVEVLSPDCGWPRVHVEADY CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECC SSSAGLGDWLSIELSLGTVGTSSLEWKFAVFHSERPVMRGRYVVVRVGKGGKPQAIPESE CCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCC RECLISGFSKGGDACK HHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-hydroxybenzoyl-CoA; H2O
Specific reaction: 4-hydroxybenzoyl-CoA + H2O = 4-hydroxybenzoate + CoA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA