| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734794
Identifier: 187734794
GI number: 187734794
Start: 342193
End: 342456
Strand: Direct
Name: 187734794
Synonym: Amuc_0283
Alternate gene names: NA
Gene position: 342193-342456 (Clockwise)
Preceding gene: 187734793
Following gene: 187734795
Centisome position: 12.84
GC content: 52.65
Gene sequence:
>264_bases GTGAGTGCCAAAGACGTTCCTCCTTCCATCACCCTGCCTACCAGCGACTACTATACCATTGTCAAAATGAGCAATCATGC CGTCGTGGGAGTATTCCGCCAGCATGTCTTTGCGCGCCGCAGCACGCGCCGTTATGCGCCCCCCATCCCTGAAGAACACG ACTCCTATTGCGTTAAAAGAACTCCGGAGCGTGTCATGGTCCAAATCTTTCATGACGGCAACGAAGTTTACCGTTGCATT TTTGTGCCGCCTGCCGATTATTGA
Upstream 100 bases:
>100_bases ATGATGGGACGCACGGACTGATGCGCCGATGTTTCGGACGTGATCCCATGCCACATTTCAGATTCGACATTGTTTTCAGC CGCCATCTATAATTCTGCCC
Downstream 100 bases:
>100_bases CGGCAGGACAACCATGAAAGCTCCTTTTTTCAGTCCGGCCTTCTGCCTCATTACAAGCCTGATTACAGCCTGCTCTTCTC CCTCCGGCCCCAATGCGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MSAKDVPPSITLPTSDYYTIVKMSNHAVVGVFRQHVFARRSTRRYAPPIPEEHDSYCVKRTPERVMVQIFHDGNEVYRCI FVPPADY
Sequences:
>Translated_87_residues MSAKDVPPSITLPTSDYYTIVKMSNHAVVGVFRQHVFARRSTRRYAPPIPEEHDSYCVKRTPERVMVQIFHDGNEVYRCI FVPPADY >Mature_86_residues SAKDVPPSITLPTSDYYTIVKMSNHAVVGVFRQHVFARRSTRRYAPPIPEEHDSYCVKRTPERVMVQIFHDGNEVYRCIF VPPADY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10086; Mature: 9954
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKDVPPSITLPTSDYYTIVKMSNHAVVGVFRQHVFARRSTRRYAPPIPEEHDSYCVKR CCCCCCCCCEEECCCCCEEEEEECCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEECC TPERVMVQIFHDGNEVYRCIFVPPADY CCCCEEEEEEECCCEEEEEEEECCCCC >Mature Secondary Structure SAKDVPPSITLPTSDYYTIVKMSNHAVVGVFRQHVFARRSTRRYAPPIPEEHDSYCVKR CCCCCCCCEEECCCCCEEEEEECCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEECC TPERVMVQIFHDGNEVYRCIFVPPADY CCCCEEEEEEECCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA