Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734795

Identifier: 187734795

GI number: 187734795

Start: 342470

End: 342913

Strand: Direct

Name: 187734795

Synonym: Amuc_0284

Alternate gene names: NA

Gene position: 342470-342913 (Clockwise)

Preceding gene: 187734794

Following gene: 187734800

Centisome position: 12.85

GC content: 56.31

Gene sequence:

>444_bases
ATGAAAGCTCCTTTTTTCAGTCCGGCCTTCTGCCTCATTACAAGCCTGATTACAGCCTGCTCTTCTCCCTCCGGCCCCAA
TGCGTGGACGCCGGTCACTTCCGGTCCTCCGCGTGCGCCCATCCCCCAGAACGAAGTTCTGGTCATTGACGAATACCCCA
TGGGGGAATACACCAACGTGGGGCATTTTAACGGGCCGGAAGGGCGCATTGTCCATGTCTCTATGGAAGACAAGGAACTA
ATCGACTACTTCACCAAGGAAGCTGCGGCCATGGGGGGCAATACCGTCGTCATCAGGGAACCGCGCATCCGCTACCGTTC
CGGCGAAGGCAAGAGCAGCCGGGTGGACGTCATCTATGTTCGGGAAGAAATGGGAACACACGGTGCGGAAGACCTGGGCA
TGGACTCGCTCCCCATTGATGAAGAATCTCTGCGGATTTATTAG

Upstream 100 bases:

>100_bases
AGAACTCCGGAGCGTGTCATGGTCCAAATCTTTCATGACGGCAACGAAGTTTACCGTTGCATTTTTGTGCCGCCTGCCGA
TTATTGACGGCAGGACAACC

Downstream 100 bases:

>100_bases
AGCCGCCGGAAACGTCCCAGGTGCCATTTCCTGCCCGGAGTTTTTTCAGCTCTTTTTATTGGCCGCACCGCAATGTGGGC
ACTCCGCACGGGAATTCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MKAPFFSPAFCLITSLITACSSPSGPNAWTPVTSGPPRAPIPQNEVLVIDEYPMGEYTNVGHFNGPEGRIVHVSMEDKEL
IDYFTKEAAAMGGNTVVIREPRIRYRSGEGKSSRVDVIYVREEMGTHGAEDLGMDSLPIDEESLRIY

Sequences:

>Translated_147_residues
MKAPFFSPAFCLITSLITACSSPSGPNAWTPVTSGPPRAPIPQNEVLVIDEYPMGEYTNVGHFNGPEGRIVHVSMEDKEL
IDYFTKEAAAMGGNTVVIREPRIRYRSGEGKSSRVDVIYVREEMGTHGAEDLGMDSLPIDEESLRIY
>Mature_147_residues
MKAPFFSPAFCLITSLITACSSPSGPNAWTPVTSGPPRAPIPQNEVLVIDEYPMGEYTNVGHFNGPEGRIVHVSMEDKEL
IDYFTKEAAAMGGNTVVIREPRIRYRSGEGKSSRVDVIYVREEMGTHGAEDLGMDSLPIDEESLRIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16179; Mature: 16179

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAPFFSPAFCLITSLITACSSPSGPNAWTPVTSGPPRAPIPQNEVLVIDEYPMGEYTNV
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
GHFNGPEGRIVHVSMEDKELIDYFTKEAAAMGGNTVVIREPRIRYRSGEGKSSRVDVIYV
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCEEEEEE
REEMGTHGAEDLGMDSLPIDEESLRIY
ECCCCCCCCCCCCCCCCCCCCCCEEEC
>Mature Secondary Structure
MKAPFFSPAFCLITSLITACSSPSGPNAWTPVTSGPPRAPIPQNEVLVIDEYPMGEYTNV
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
GHFNGPEGRIVHVSMEDKELIDYFTKEAAAMGGNTVVIREPRIRYRSGEGKSSRVDVIYV
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCEEEEEE
REEMGTHGAEDLGMDSLPIDEESLRIY
ECCCCCCCCCCCCCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA