| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734793
Identifier: 187734793
GI number: 187734793
Start: 341610
End: 342113
Strand: Direct
Name: 187734793
Synonym: Amuc_0282
Alternate gene names: NA
Gene position: 341610-342113 (Clockwise)
Preceding gene: 187734792
Following gene: 187734794
Centisome position: 12.82
GC content: 53.57
Gene sequence:
>504_bases ATGGATGCCCTGGAAGCGAAATTCGCCGGCGGCTTCGGCCAGCAGACGGACAAGGAAGGAAACACCAGGATGGTGTCCCA AAAACGGAGTTCCTTTGAAGGGCTCCGGTACAGCGGCAACACGTCTCAAATCGAAAAAAAGGCTTTTGAAACCGCATCCT TTGAAAAAAAGAAATTTGACGGTGCCTCCACCCGGTTTGAAACGAAGAAATGGGACGGCATCAAATCCTTCACGGATGAT AAACTGGAAACACCGGACTTCATCGCCCGCGCCAGGGGAGTAAATACCCACTCCTGGCAGGATGCCTCCAAACAATACGC CACGCAGCAATCCGACTTTCATGGACGCTCCTGGAAAGATGCGGACAAGCGCCTCGGCCACACTGTCAACCGGGACATTG AAGCCAAGAGACAAAGCTTTGGACAGCCAACTATCATGAGTGCGCGGCAGGCCCAGGCGCATACTATTCAGGAAACGCGG GAAATGATGGGACGCACGGACTGA
Upstream 100 bases:
>100_bases CACCGTAGCAGCACTTTGCTCCTGTGCTACAGAACGCACGGTAGCTACAAACTTTCAGCCCCGGCAACGCCCTGATTCGG AAAAAACGGACGCAGAGCTG
Downstream 100 bases:
>100_bases TGCGCCGATGTTTCGGACGTGATCCCATGCCACATTTCAGATTCGACATTGTTTTCAGCCGCCATCTATAATTCTGCCCG TGAGTGCCAAAGACGTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MDALEAKFAGGFGQQTDKEGNTRMVSQKRSSFEGLRYSGNTSQIEKKAFETASFEKKKFDGASTRFETKKWDGIKSFTDD KLETPDFIARARGVNTHSWQDASKQYATQQSDFHGRSWKDADKRLGHTVNRDIEAKRQSFGQPTIMSARQAQAHTIQETR EMMGRTD
Sequences:
>Translated_167_residues MDALEAKFAGGFGQQTDKEGNTRMVSQKRSSFEGLRYSGNTSQIEKKAFETASFEKKKFDGASTRFETKKWDGIKSFTDD KLETPDFIARARGVNTHSWQDASKQYATQQSDFHGRSWKDADKRLGHTVNRDIEAKRQSFGQPTIMSARQAQAHTIQETR EMMGRTD >Mature_167_residues MDALEAKFAGGFGQQTDKEGNTRMVSQKRSSFEGLRYSGNTSQIEKKAFETASFEKKKFDGASTRFETKKWDGIKSFTDD KLETPDFIARARGVNTHSWQDASKQYATQQSDFHGRSWKDADKRLGHTVNRDIEAKRQSFGQPTIMSARQAQAHTIQETR EMMGRTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19013; Mature: 19013
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDALEAKFAGGFGQQTDKEGNTRMVSQKRSSFEGLRYSGNTSQIEKKAFETASFEKKKFD CCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC GASTRFETKKWDGIKSFTDDKLETPDFIARARGVNTHSWQDASKQYATQQSDFHGRSWKD CCCCCCCCHHCCCCHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCC ADKRLGHTVNRDIEAKRQSFGQPTIMSARQAQAHTIQETREMMGRTD HHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDALEAKFAGGFGQQTDKEGNTRMVSQKRSSFEGLRYSGNTSQIEKKAFETASFEKKKFD CCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC GASTRFETKKWDGIKSFTDDKLETPDFIARARGVNTHSWQDASKQYATQQSDFHGRSWKD CCCCCCCCHHCCCCHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCC ADKRLGHTVNRDIEAKRQSFGQPTIMSARQAQAHTIQETREMMGRTD HHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA