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The map label for this gene is hup [H]

Identifier: 187734792

GI number: 187734792

Start: 341069

End: 341374

Strand: Direct

Name: hup [H]

Synonym: Amuc_0281

Alternate gene names: 187734792

Gene position: 341069-341374 (Clockwise)

Preceding gene: 187734790

Following gene: 187734793

Centisome position: 12.8

GC content: 50.98

Gene sequence:

>306_bases
ATGGCTAAAACATTAACAAAACGAGACCTCGTTAACAAAATCAGCGCCGAAACCAACTTCACTCAGATTGAAGTGTTCGA
CATCGTACAGCGTGCCGTGGACATTATCTCCAGCACCCTTGCTGAAGGCGACCGTGTGGTGATTCGCAATTTCGGAACCT
TCCAGGTGAAGGAAGTGAAGCCCAAAGTAGGCCGCAACCCCAAAAATCCCGACCAGGATGTGCCGATTCCGGCCCGCTCC
GTTGTCAAATTCAAGGTTGGCAAGGAATTGAAGGATCAGGTCGCCAAGCTGACCGCCTCCAAGTAA

Upstream 100 bases:

>100_bases
CGTAAAAATCAAGCATGCCACGGATTATGTGATTTTTTAGGAGACAAATCATGCACGCTGAACTATAAAACTCATACATT
CATATCATTCTGCACTCCAT

Downstream 100 bases:

>100_bases
TCCCCACAGGGATCAGACAGATTACTCCGGGCGCCTCCATCAAACAATGGAGGCGCCTTTTTGTTTGCAATTTGCGCGGC
ATTCGGGAATATAAGGGAAC

Product: histone family protein DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MAKTLTKRDLVNKISAETNFTQIEVFDIVQRAVDIISSTLAEGDRVVIRNFGTFQVKEVKPKVGRNPKNPDQDVPIPARS
VVKFKVGKELKDQVAKLTASK

Sequences:

>Translated_101_residues
MAKTLTKRDLVNKISAETNFTQIEVFDIVQRAVDIISSTLAEGDRVVIRNFGTFQVKEVKPKVGRNPKNPDQDVPIPARS
VVKFKVGKELKDQVAKLTASK
>Mature_100_residues
AKTLTKRDLVNKISAETNFTQIEVFDIVQRAVDIISSTLAEGDRVVIRNFGTFQVKEVKPKVGRNPKNPDQDVPIPARSV
VKFKVGKELKDQVAKLTASK

Specific function: Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions [H]

COG id: COG0776

COG function: function code L; Bacterial nucleoid DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial histone-like protein family [H]

Homologues:

Organism=Escherichia coli, GI1787141, Length=91, Percent_Identity=36.2637362637363, Blast_Score=67, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000119
- InterPro:   IPR010992 [H]

Pfam domain/function: PF00216 Bac_DNA_binding [H]

EC number: NA

Molecular weight: Translated: 11251; Mature: 11120

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTLTKRDLVNKISAETNFTQIEVFDIVQRAVDIISSTLAEGDRVVIRNFGTFQVKEVK
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECC
PKVGRNPKNPDQDVPIPARSVVKFKVGKELKDQVAKLTASK
CCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCC
>Mature Secondary Structure 
AKTLTKRDLVNKISAETNFTQIEVFDIVQRAVDIISSTLAEGDRVVIRNFGTFQVKEVK
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECC
PKVGRNPKNPDQDVPIPARSVVKFKVGKELKDQVAKLTASK
CCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10684935 [H]