| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734779
Identifier: 187734779
GI number: 187734779
Start: 330369
End: 330860
Strand: Reverse
Name: 187734779
Synonym: Amuc_0267
Alternate gene names: NA
Gene position: 330860-330369 (Counterclockwise)
Preceding gene: 187734780
Following gene: 187734778
Centisome position: 12.42
GC content: 46.34
Gene sequence:
>492_bases ATGAAAAGATTGCTGGTAGAACTGGAGAACTTGCCGGAGGCAGGGAAAAAATACAGCGGCGAACTGGATTCTGAAATTTT CGGCATTGATGATGAAGAGGTTACTTCCATTGGTCCTCTTGCTTTTGATCTGCATGTGCAGAGATTTGAAAATGAATTGT TTGTAAGAGGCAATATTTCCGCCCCCTTTAAATTCCGCTGTGTGCGTTGCCTGGGCTACTTTGACTACGTGGTGGAAGTT TGTGATTTCGCGGCTTCTTTCCAGATTGATTCACAGAATGTTGTGGATGTTTCAGATTCCTTGAGGGAAGAAATAGTTCT GGATTTTCCGGCATACCCGAAGTGTGCTGACGGAGGCATGGAAAACGACTGTATGGCGAAAACTCCGTATTTTGGAGTGG ACAAAGAGGGGGGAACGGGTGTAAACAGTTCTGCCCCGATCAGGAATAGCGGCGTGTGGGACGCCCTCAATGAACTGGGA GATCATCATTAA
Upstream 100 bases:
>100_bases TTCGGGCATTTGCCTGAAAGAGGGACGGATGTGTCATTTTCCATGAATGGTGCCGCCCTGCCTGCTTGTCAGGCATTAAG TATGCCTGTAAGATATACTC
Downstream 100 bases:
>100_bases TCACCTTTTTACCAACTAAAATTATGGCAGCACCTAAGCGCAGAACGTCCAAGATGAAGCAGCGTACCCGCCTTGCCGCT CAGGCATGGCGCGCGCCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MKRLLVELENLPEAGKKYSGELDSEIFGIDDEEVTSIGPLAFDLHVQRFENELFVRGNISAPFKFRCVRCLGYFDYVVEV CDFAASFQIDSQNVVDVSDSLREEIVLDFPAYPKCADGGMENDCMAKTPYFGVDKEGGTGVNSSAPIRNSGVWDALNELG DHH
Sequences:
>Translated_163_residues MKRLLVELENLPEAGKKYSGELDSEIFGIDDEEVTSIGPLAFDLHVQRFENELFVRGNISAPFKFRCVRCLGYFDYVVEV CDFAASFQIDSQNVVDVSDSLREEIVLDFPAYPKCADGGMENDCMAKTPYFGVDKEGGTGVNSSAPIRNSGVWDALNELG DHH >Mature_163_residues MKRLLVELENLPEAGKKYSGELDSEIFGIDDEEVTSIGPLAFDLHVQRFENELFVRGNISAPFKFRCVRCLGYFDYVVEV CDFAASFQIDSQNVVDVSDSLREEIVLDFPAYPKCADGGMENDCMAKTPYFGVDKEGGTGVNSSAPIRNSGVWDALNELG DHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18111; Mature: 18111
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLVELENLPEAGKKYSGELDSEIFGIDDEEVTSIGPLAFDLHVQRFENELFVRGNIS CCHHHHHHHCCCCCHHHCCCCCCCEEECCCCHHHHHCCCCHHHHHHHHHCCEEEEECCCC APFKFRCVRCLGYFDYVVEVCDFAASFQIDSQNVVDVSDSLREEIVLDFPAYPKCADGGM CCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEECHHHHHHHHEEECCCCCCCCCCCCC ENDCMAKTPYFGVDKEGGTGVNSSAPIRNSGVWDALNELGDHH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MKRLLVELENLPEAGKKYSGELDSEIFGIDDEEVTSIGPLAFDLHVQRFENELFVRGNIS CCHHHHHHHCCCCCHHHCCCCCCCEEECCCCHHHHHCCCCHHHHHHHHHCCEEEEECCCC APFKFRCVRCLGYFDYVVEVCDFAASFQIDSQNVVDVSDSLREEIVLDFPAYPKCADGGM CCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEECHHHHHHHHEEECCCCCCCCCCCCC ENDCMAKTPYFGVDKEGGTGVNSSAPIRNSGVWDALNELGDHH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA