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The map label for this gene is ycfF [C]

Identifier: 187734780

GI number: 187734780

Start: 330972

End: 331316

Strand: Reverse

Name: ycfF [C]

Synonym: Amuc_0268

Alternate gene names: 187734780

Gene position: 331316-330972 (Counterclockwise)

Preceding gene: 187734781

Following gene: 187734779

Centisome position: 12.44

GC content: 56.52

Gene sequence:

>345_bases
ATGGCCGCTACGTTATTTGAAAAAATCTGTTCAGGGGAAATCCCCGCGGACATCGTATATCAGGATGACCTGTGTGTTTG
CTTCCGGGACATTAGTCCACAAGCACCGGAACATTTGCTGCTTGTTCCGCGCAAGCCCATTCCCCGCCTTTCCGAGGCCG
GGAAGGAAGATGCCGCCCTTCTGGGACACATGATGCTGGCAGTCGGGCGGATTGCCCGGACTCTTCATCTGGATGAAGGT
GGCTTTCGCCTGGTCATCAACAATGGGCATGACGCCGGGGAAGCTGTCCCCCATTTGCACATGCATCTGTTGGCAGGCCG
CAAGCTGGAATGGCCTCCCGGTTAG

Upstream 100 bases:

>100_bases
GCTATTATGGATCGCCTGCGACGCGCTTCAGCCGTCAGGGAATAACTTGCCCACGGTTTGCAAAACATGTTAAAGTCATT
GCAGATTCCTTTTTGATTTT

Downstream 100 bases:

>100_bases
GCCGGAGCGAATTCGGGCATTTGCCTGAAAGAGGGACGGATGTGTCATTTTCCATGAATGGTGCCGCCCTGCCTGCTTGT
CAGGCATTAAGTATGCCTGT

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MAATLFEKICSGEIPADIVYQDDLCVCFRDISPQAPEHLLLVPRKPIPRLSEAGKEDAALLGHMMLAVGRIARTLHLDEG
GFRLVINNGHDAGEAVPHLHMHLLAGRKLEWPPG

Sequences:

>Translated_114_residues
MAATLFEKICSGEIPADIVYQDDLCVCFRDISPQAPEHLLLVPRKPIPRLSEAGKEDAALLGHMMLAVGRIARTLHLDEG
GFRLVINNGHDAGEAVPHLHMHLLAGRKLEWPPG
>Mature_113_residues
AATLFEKICSGEIPADIVYQDDLCVCFRDISPQAPEHLLLVPRKPIPRLSEAGKEDAALLGHMMLAVGRIARTLHLDEGG
FRLVINNGHDAGEAVPHLHMHLLAGRKLEWPPG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI14211923, Length=113, Percent_Identity=50.4424778761062, Blast_Score=130, Evalue=2e-31,
Organism=Homo sapiens, GI4885413, Length=111, Percent_Identity=48.6486486486487, Blast_Score=122, Evalue=6e-29,
Organism=Escherichia coli, GI1787346, Length=106, Percent_Identity=48.1132075471698, Blast_Score=97, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17506713, Length=111, Percent_Identity=47.7477477477478, Blast_Score=122, Evalue=5e-29,
Organism=Drosophila melanogaster, GI28574010, Length=111, Percent_Identity=51.3513513513513, Blast_Score=125, Evalue=7e-30,
Organism=Drosophila melanogaster, GI24581222, Length=111, Percent_Identity=51.3513513513513, Blast_Score=124, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 12491; Mature: 12360

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATLFEKICSGEIPADIVYQDDLCVCFRDISPQAPEHLLLVPRKPIPRLSEAGKEDAAL
CCHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCEEEEECCCCCCCHHHCCCHHHHH
LGHMMLAVGRIARTLHLDEGGFRLVINNGHDAGEAVPHLHMHLLAGRKLEWPPG
HHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AATLFEKICSGEIPADIVYQDDLCVCFRDISPQAPEHLLLVPRKPIPRLSEAGKEDAAL
CHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCEEEEECCCCCCCHHHCCCHHHHH
LGHMMLAVGRIARTLHLDEGGFRLVINNGHDAGEAVPHLHMHLLAGRKLEWPPG
HHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]