| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734774
Identifier: 187734774
GI number: 187734774
Start: 325501
End: 326127
Strand: Direct
Name: 187734774
Synonym: Amuc_0262
Alternate gene names: NA
Gene position: 325501-326127 (Clockwise)
Preceding gene: 187734773
Following gene: 187734782
Centisome position: 12.22
GC content: 46.89
Gene sequence:
>627_bases ATGTCTGACGACGATATACGCATTTTGGTGAAGGAGTGGCTACAAAGCCAAAACCGCAAGTCCTATCAATTGGCGGAGGA GATAGGCATCCGGCCGCAAACTTTTTACGCACAGATGAGCGTTCGTAAAATATCGGCCAATACCAAAAAAGCGCTTTCCC GCATCATTCCAGGCCTGGTTTCCGATTCAGATCTGAATCCACCTTCCAATACGGAAGAATGTGACCCGAAAAAACTCAGA ATCAAGGAATGGCTCCGGGCTCACGGCAAAACACGCCGATGGCTTGCGGAACAATGCCGCGTTTCCGTCCGCACCGTACA TACCTGGTTTACTGCACGCGGTAACATTCCTGTCACCCAATATCTCTTTATCGATAAGCTGATGAGTGAAGGCGAGTCGT GGAAAGTTCAGCTTCCCAATACCATTCCCGTGAATTTTCCGGAAACGGAAATGGAAATTGTTCACAAATTCCAGAAACTA CATCCGGACATAGATCTTCCTATGTACGGCATGCATAAAATCCTGGAGTTATGCGTTAATGTACTCACTCAGGATGAATA TTCAAAGACGTCTCCATACTCCCGTATTACCAATACCGGAGAGATTCGCCACCGCCGGATAAAATAA
Upstream 100 bases:
>100_bases AAGAGGATCCGATATTCCGGATCGATTCCAGAGAAAGAGAAAATAGTGTTGTTATCGCCTCTTCCCTATCTTTTCTTTCA TTACAAATCTGCACAAATTC
Downstream 100 bases:
>100_bases GAATTATTCAAAAGTTCAAATTTTCTTTTCCACGGGAGCATTTCTGAAAATGCACTGTTTGCATACCCATGCCGGTATTT TTCTAAAACATCGCAGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MSDDDIRILVKEWLQSQNRKSYQLAEEIGIRPQTFYAQMSVRKISANTKKALSRIIPGLVSDSDLNPPSNTEECDPKKLR IKEWLRAHGKTRRWLAEQCRVSVRTVHTWFTARGNIPVTQYLFIDKLMSEGESWKVQLPNTIPVNFPETEMEIVHKFQKL HPDIDLPMYGMHKILELCVNVLTQDEYSKTSPYSRITNTGEIRHRRIK
Sequences:
>Translated_208_residues MSDDDIRILVKEWLQSQNRKSYQLAEEIGIRPQTFYAQMSVRKISANTKKALSRIIPGLVSDSDLNPPSNTEECDPKKLR IKEWLRAHGKTRRWLAEQCRVSVRTVHTWFTARGNIPVTQYLFIDKLMSEGESWKVQLPNTIPVNFPETEMEIVHKFQKL HPDIDLPMYGMHKILELCVNVLTQDEYSKTSPYSRITNTGEIRHRRIK >Mature_207_residues SDDDIRILVKEWLQSQNRKSYQLAEEIGIRPQTFYAQMSVRKISANTKKALSRIIPGLVSDSDLNPPSNTEECDPKKLRI KEWLRAHGKTRRWLAEQCRVSVRTVHTWFTARGNIPVTQYLFIDKLMSEGESWKVQLPNTIPVNFPETEMEIVHKFQKLH PDIDLPMYGMHKILELCVNVLTQDEYSKTSPYSRITNTGEIRHRRIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24350; Mature: 24219
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDDIRILVKEWLQSQNRKSYQLAEEIGIRPQTFYAQMSVRKISANTKKALSRIIPGLV CCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC SDSDLNPPSNTEECDPKKLRIKEWLRAHGKTRRWLAEQCRVSVRTVHTWFTARGNIPVTQ CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCCHHH YLFIDKLMSEGESWKVQLPNTIPVNFPETEMEIVHKFQKLHPDIDLPMYGMHKILELCVN HHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH VLTQDEYSKTSPYSRITNTGEIRHRRIK HHHCCCCCCCCCHHHHCCCHHHHHCCCC >Mature Secondary Structure SDDDIRILVKEWLQSQNRKSYQLAEEIGIRPQTFYAQMSVRKISANTKKALSRIIPGLV CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC SDSDLNPPSNTEECDPKKLRIKEWLRAHGKTRRWLAEQCRVSVRTVHTWFTARGNIPVTQ CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCCHHH YLFIDKLMSEGESWKVQLPNTIPVNFPETEMEIVHKFQKLHPDIDLPMYGMHKILELCVN HHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH VLTQDEYSKTSPYSRITNTGEIRHRRIK HHHCCCCCCCCCHHHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA