| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is aroK [H]
Identifier: 187734782
GI number: 187734782
Start: 332656
End: 333210
Strand: Direct
Name: aroK [H]
Synonym: Amuc_0270
Alternate gene names: 187734782
Gene position: 332656-333210 (Clockwise)
Preceding gene: 187734774
Following gene: 187734790
Centisome position: 12.49
GC content: 50.99
Gene sequence:
>555_bases ATGAATAGGGCCGCATCAACATCCTTGCCAAACATCATCCTGATCGGGCTGATGGGATGCGGCAAAACTACCATCGGAAA GGAACTGCACCGGGAAACGAACCTTGGTTTTACGGATACGGACCAGTTAATCGAACGCCAGACGGGAATGCACATTCCGC AGATTTTCAAAATTCATGGGGAATCACATTTTCGAGACCTGGAAACCGGAATCCTGCAACAGCTTCAGACGGCCGCCGCA CAAAGCCGCATTATTTCCACAGGAGGAGGCATCATTATCAGACCGGAAAACCGGCTGCTACTGAAAAAACTGGGCTTCGT CGTCTGGCTCCATACAGACGTAAACATCCTGTACCAGCGTATTTCCAGATGCACCAACCGCCCCCTGCTCCAACAACCCA ATCCCAAGGCCGTGCTGGAACATCTCATGAATGAACGGCATGATTTTTACCAGGAAACGGCGCACTTGACCATTGATACG GCCAATCTCCACATCCATGAAATCGCATTCGGCATTCTGGAATCCGCCAGAGTATTCCGGTCCCGACGGCAATAA
Upstream 100 bases:
>100_bases TCCACCCTTACGGACTTCCCCGAGTGAAAGCTGGCGCAGGAAAAGGCCATTCCGCTAAAAAGTTGTTTTCTCACGCTACC GGATTGAGTACAATCAAGCC
Downstream 100 bases:
>100_bases TGCCGACCCGTTTTTCCGTGAGCGGGAAATTTTCTCTTTCTGATTCATCCTAACGCAAGCGCTTCCGGGGAAGCCCTTTT TCCCGCTCCACGCACAAGAA
Product: Shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MNRAASTSLPNIILIGLMGCGKTTIGKELHRETNLGFTDTDQLIERQTGMHIPQIFKIHGESHFRDLETGILQQLQTAAA QSRIISTGGGIIIRPENRLLLKKLGFVVWLHTDVNILYQRISRCTNRPLLQQPNPKAVLEHLMNERHDFYQETAHLTIDT ANLHIHEIAFGILESARVFRSRRQ
Sequences:
>Translated_184_residues MNRAASTSLPNIILIGLMGCGKTTIGKELHRETNLGFTDTDQLIERQTGMHIPQIFKIHGESHFRDLETGILQQLQTAAA QSRIISTGGGIIIRPENRLLLKKLGFVVWLHTDVNILYQRISRCTNRPLLQQPNPKAVLEHLMNERHDFYQETAHLTIDT ANLHIHEIAFGILESARVFRSRRQ >Mature_184_residues MNRAASTSLPNIILIGLMGCGKTTIGKELHRETNLGFTDTDQLIERQTGMHIPQIFKIHGESHFRDLETGILQQLQTAAA QSRIISTGGGIIIRPENRLLLKKLGFVVWLHTDVNILYQRISRCTNRPLLQQPNPKAVLEHLMNERHDFYQETAHLTIDT ANLHIHEIAFGILESARVFRSRRQ
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=164, Percent_Identity=39.0243902439024, Blast_Score=117, Evalue=7e-28, Organism=Escherichia coli, GI1786587, Length=154, Percent_Identity=35.7142857142857, Blast_Score=94, Evalue=6e-21,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 20948; Mature: 20948
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRAASTSLPNIILIGLMGCGKTTIGKELHRETNLGFTDTDQLIERQTGMHIPQIFKIHG CCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHEEECC ESHFRDLETGILQQLQTAAAQSRIISTGGGIIIRPENRLLLKKLGFVVWLHTDVNILYQR CHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCCHHHHHHHCEEEEEECCHHHHHHH ISRCTNRPLLQQPNPKAVLEHLMNERHDFYQETAHLTIDTANLHIHEIAFGILESARVFR HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHH SRRQ HCCC >Mature Secondary Structure MNRAASTSLPNIILIGLMGCGKTTIGKELHRETNLGFTDTDQLIERQTGMHIPQIFKIHG CCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHEEECC ESHFRDLETGILQQLQTAAAQSRIISTGGGIIIRPENRLLLKKLGFVVWLHTDVNILYQR CHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCCHHHHHHHCEEEEEECCHHHHHHH ISRCTNRPLLQQPNPKAVLEHLMNERHDFYQETAHLTIDTANLHIHEIAFGILESARVFR HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHH SRRQ HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA