| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734707
Identifier: 187734707
GI number: 187734707
Start: 243629
End: 245362
Strand: Direct
Name: 187734707
Synonym: Amuc_0194
Alternate gene names: NA
Gene position: 243629-245362 (Clockwise)
Preceding gene: 187734706
Following gene: 187734709
Centisome position: 9.14
GC content: 58.59
Gene sequence:
>1734_bases ATGAAAACGGTTTCCATCCTTCTCTTAGGACTGGCCATAGGCCTTTCCGGCTGTTCCCTGCACCAGAGGCAGGAAATGGA GTACGCCCATTACCAGGATGACGCCGCGGCTATCCGGGAGGCCCATGCCGCATGGCTCATTCTTTCCTCTCCCAACCGCA GCCGGGAATGGCCGGAAGCCCGGAAAAAATACAATGCGTGCATTCGGGAGCTGGCCGCCCACCTGAAGGAAGCCAAACGC AAAGGCGGCATGGATGAGGAGAAGCGCCTGAACCTTCCCTTCGTCATTGAAAAATCTCCCTATGCCAAGGACAGCAATCC GTGGTTCTATGAGGCCATTTTCATGTCCGATGAAGTGGACCCCACCTTCCGCCTGCGCGAAAGCGTGACGGTGGAGGGAA TGGGCATACCGCTGGCGGGGCTGGCGCCCCGGGGTGGTTCCCGCCCCCATGCCAACGTGCTTAAGGACAACGGCAACGTG CACACGCTGACGGCCATTCTGGACTTTGACCGCATGGTGGACGGGAAACCTACCCTCCGCACCATTCCGCGCCTGATGAA TGAGCACATCTTCATTGGCAAAAACAAGGTGCGGCAGCCTCTGGCGGCCAATTTTTCCGTCCCCATCGCTCTCTTCTGGA AGCTTTCCGACGCAGACGGGACGGAACTGCTGGGGGCATTCCGCCCCAAAAAGGCCATCAATACGATGGGGCTTTATTTT TCCGAACCCTATGACCCCCGGAAAATACCCGTGGTTTTCACCCACGGCCTGATGTCCGGCCCCGCCACCTTCGCTAACCT GACCAACCGTCTCCTGGTGGATCCGGTCATCCGGGAAAACTACCAATTCTGGTTCTTCGGCTATCCGTCCGGGCTGGCCT GGACCATTCCGGCCAACAGGCAGCGGCAGGCCCTGAAGGAGCTCATGCAGGAATACAATCCCCGCGGGACATCCAGGGAA ATGAACAACATCGTCATGGTGGGGCACTCCATGGGCGGCCTCATCACCCGCTTCAATAACTCCACCAAACCCTGGACGCT GATGAAGGGACTCTTTGAACTTCCTCCGGAAACCTTCGCAGGCATGACGATGGGAAACTGGAAAAACGGACTGGCGCCCC TGAACTGTGACGAACATACGCTTGAACAGCTCCAGAACAATTTCATCTTCTCCCCGTCCAGCAGCGTCACGCGCATCGTG TACATGGCCACCCCGCACCGCGGTTCCACTTTCGCGGACAACTGGATAGGAAGGCTGGGACAGCACCTGATCGACCTCCC CTCGGACATGCTGGAAGAAGTCACCCGCATCGCCACTCTCAGCCGCGGCATGTTCCTCCTTAACCCCCTGCAACTGAAGG ACGAGCTGACCAGCATCCGCCAGCTTTCCCCAAATTCATCCCTGGTCAAATACATGTCGGAGCTGCGCGGCTCCCCAAAT GTTCCCGTTCATTCCATCATTGGAGACAGGGGAAGGAACGACACGCCCAATTCCTCCGACGGAGTGGTCAAGTACCACTC ATCCCACCTGGACTGGAGCGCCAGTGAAAAAATCGTTCCGTCCGGGCACAGCGTGCAGGATGACCCGGCCTCCGCCGTGG AACTGCGGCGCATCCTCCGGGAACACCTGGTCAAGGTCAAAGGCCGTAAAACGCTCGAAGAAGCGGACGCGAAAGCCGCC ACTCCCGTATGGCAGGCCAATCCCTCGCCGCCTATCATCCTGAAAAGGCCCTGA
Upstream 100 bases:
>100_bases ACGGAAGAGGAAGTGCAGACCTTCCTCAAATCCATGAACCGGGCGCTGGACATGCTCTCCTGAATCCCCCTCCCTTCCCT GCTTATTGACACCGCGCATC
Downstream 100 bases:
>100_bases TGCAGGGGGCTGATTCTCCTTGTCCATGCAAGGCCTCCTTCCCTTCCCCCTTCTGTTGTTCCTGCTGATAGCGGCAGCCA TCTTCCAGTCAAACGGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MKTVSILLLGLAIGLSGCSLHQRQEMEYAHYQDDAAAIREAHAAWLILSSPNRSREWPEARKKYNACIRELAAHLKEAKR KGGMDEEKRLNLPFVIEKSPYAKDSNPWFYEAIFMSDEVDPTFRLRESVTVEGMGIPLAGLAPRGGSRPHANVLKDNGNV HTLTAILDFDRMVDGKPTLRTIPRLMNEHIFIGKNKVRQPLAANFSVPIALFWKLSDADGTELLGAFRPKKAINTMGLYF SEPYDPRKIPVVFTHGLMSGPATFANLTNRLLVDPVIRENYQFWFFGYPSGLAWTIPANRQRQALKELMQEYNPRGTSRE MNNIVMVGHSMGGLITRFNNSTKPWTLMKGLFELPPETFAGMTMGNWKNGLAPLNCDEHTLEQLQNNFIFSPSSSVTRIV YMATPHRGSTFADNWIGRLGQHLIDLPSDMLEEVTRIATLSRGMFLLNPLQLKDELTSIRQLSPNSSLVKYMSELRGSPN VPVHSIIGDRGRNDTPNSSDGVVKYHSSHLDWSASEKIVPSGHSVQDDPASAVELRRILREHLVKVKGRKTLEEADAKAA TPVWQANPSPPIILKRP
Sequences:
>Translated_577_residues MKTVSILLLGLAIGLSGCSLHQRQEMEYAHYQDDAAAIREAHAAWLILSSPNRSREWPEARKKYNACIRELAAHLKEAKR KGGMDEEKRLNLPFVIEKSPYAKDSNPWFYEAIFMSDEVDPTFRLRESVTVEGMGIPLAGLAPRGGSRPHANVLKDNGNV HTLTAILDFDRMVDGKPTLRTIPRLMNEHIFIGKNKVRQPLAANFSVPIALFWKLSDADGTELLGAFRPKKAINTMGLYF SEPYDPRKIPVVFTHGLMSGPATFANLTNRLLVDPVIRENYQFWFFGYPSGLAWTIPANRQRQALKELMQEYNPRGTSRE MNNIVMVGHSMGGLITRFNNSTKPWTLMKGLFELPPETFAGMTMGNWKNGLAPLNCDEHTLEQLQNNFIFSPSSSVTRIV YMATPHRGSTFADNWIGRLGQHLIDLPSDMLEEVTRIATLSRGMFLLNPLQLKDELTSIRQLSPNSSLVKYMSELRGSPN VPVHSIIGDRGRNDTPNSSDGVVKYHSSHLDWSASEKIVPSGHSVQDDPASAVELRRILREHLVKVKGRKTLEEADAKAA TPVWQANPSPPIILKRP >Mature_577_residues MKTVSILLLGLAIGLSGCSLHQRQEMEYAHYQDDAAAIREAHAAWLILSSPNRSREWPEARKKYNACIRELAAHLKEAKR KGGMDEEKRLNLPFVIEKSPYAKDSNPWFYEAIFMSDEVDPTFRLRESVTVEGMGIPLAGLAPRGGSRPHANVLKDNGNV HTLTAILDFDRMVDGKPTLRTIPRLMNEHIFIGKNKVRQPLAANFSVPIALFWKLSDADGTELLGAFRPKKAINTMGLYF SEPYDPRKIPVVFTHGLMSGPATFANLTNRLLVDPVIRENYQFWFFGYPSGLAWTIPANRQRQALKELMQEYNPRGTSRE MNNIVMVGHSMGGLITRFNNSTKPWTLMKGLFELPPETFAGMTMGNWKNGLAPLNCDEHTLEQLQNNFIFSPSSSVTRIV YMATPHRGSTFADNWIGRLGQHLIDLPSDMLEEVTRIATLSRGMFLLNPLQLKDELTSIRQLSPNSSLVKYMSELRGSPN VPVHSIIGDRGRNDTPNSSDGVVKYHSSHLDWSASEKIVPSGHSVQDDPASAVELRRILREHLVKVKGRKTLEEADAKAA TPVWQANPSPPIILKRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64737; Mature: 64737
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTVSILLLGLAIGLSGCSLHQRQEMEYAHYQDDAAAIREAHAAWLILSSPNRSREWPEA CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHCCEEEEEEECCCCCCCCHHH RKKYNACIRELAAHLKEAKRKGGMDEEKRLNLPFVIEKSPYAKDSNPWFYEAIFMSDEVD HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEECCCCCCCCCCCEEEEEEEECCCCC PTFRLRESVTVEGMGIPLAGLAPRGGSRPHANVLKDNGNVHTLTAILDFDRMVDGKPTLR CHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEEEEEHHHHCCCCCHHH TIPRLMNEHIFIGKNKVRQPLAANFSVPIALFWKLSDADGTELLGAFRPKKAINTMGLYF HHHHHHCCCEEECCHHHCCCHHCCCCCCEEEEEEECCCCCHHHHHHCCCHHHHHHHCCEE SEPYDPRKIPVVFTHGLMSGPATFANLTNRLLVDPVIRENYQFWFFGYPSGLAWTIPANR CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCHHHHCCCEEEEEECCCCEEEECCCCH QRQALKELMQEYNPRGTSREMNNIVMVGHSMGGLITRFNNSTKPWTLMKGLFELPPETFA HHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHCCCHHHC GMTMGNWKNGLAPLNCDEHTLEQLQNNFIFSPSSSVTRIVYMATPHRGSTFADNWIGRLG CCCCCCCCCCCCCCCCCHHHHHHHHCCEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHH QHLIDLPSDMLEEVTRIATLSRGMFLLNPLQLKDELTSIRQLSPNSSLVKYMSELRGSPN HHHHHCCHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC VPVHSIIGDRGRNDTPNSSDGVVKYHSSHLDWSASEKIVPSGHSVQDDPASAVELRRILR CCHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH EHLVKVKGRKTLEEADAKAATPVWQANPSPPIILKRP HHHHHHCCCHHHHHHCCHHCCCCCCCCCCCCEEEECC >Mature Secondary Structure MKTVSILLLGLAIGLSGCSLHQRQEMEYAHYQDDAAAIREAHAAWLILSSPNRSREWPEA CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHCCEEEEEEECCCCCCCCHHH RKKYNACIRELAAHLKEAKRKGGMDEEKRLNLPFVIEKSPYAKDSNPWFYEAIFMSDEVD HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEECCCCCCCCCCCEEEEEEEECCCCC PTFRLRESVTVEGMGIPLAGLAPRGGSRPHANVLKDNGNVHTLTAILDFDRMVDGKPTLR CHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEEEEEHHHHCCCCCHHH TIPRLMNEHIFIGKNKVRQPLAANFSVPIALFWKLSDADGTELLGAFRPKKAINTMGLYF HHHHHHCCCEEECCHHHCCCHHCCCCCCEEEEEEECCCCCHHHHHHCCCHHHHHHHCCEE SEPYDPRKIPVVFTHGLMSGPATFANLTNRLLVDPVIRENYQFWFFGYPSGLAWTIPANR CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCHHHHCCCEEEEEECCCCEEEECCCCH QRQALKELMQEYNPRGTSREMNNIVMVGHSMGGLITRFNNSTKPWTLMKGLFELPPETFA HHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHCCCHHHC GMTMGNWKNGLAPLNCDEHTLEQLQNNFIFSPSSSVTRIVYMATPHRGSTFADNWIGRLG CCCCCCCCCCCCCCCCCHHHHHHHHCCEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHH QHLIDLPSDMLEEVTRIATLSRGMFLLNPLQLKDELTSIRQLSPNSSLVKYMSELRGSPN HHHHHCCHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC VPVHSIIGDRGRNDTPNSSDGVVKYHSSHLDWSASEKIVPSGHSVQDDPASAVELRRILR CCHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH EHLVKVKGRKTLEEADAKAATPVWQANPSPPIILKRP HHHHHHCCCHHHHHHCCHHCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA