| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734709
Identifier: 187734709
GI number: 187734709
Start: 245832
End: 247475
Strand: Direct
Name: 187734709
Synonym: Amuc_0196
Alternate gene names: NA
Gene position: 245832-247475 (Clockwise)
Preceding gene: 187734707
Following gene: 187734710
Centisome position: 9.23
GC content: 57.18
Gene sequence:
>1644_bases ATGTCTGCTGACGATTCCTTTCCCATGGACCAGATTTCCTCTCTCTTTCCCCAATTGGAAAATATCCAGCTTGTCGGAGC CAAAGGCCCCCAGCAAATTTTCACAGCTACCCTGAAATCAAACTTTGCTCCCGTCATGCTGCGGGTGGTTCCCACGGAAG AAGCCGGCATCTTCGGCTGGGATCCTGAATTCATCGTCCGCTCCCTCACCATCGTGGAACAATCCCACCAGGGGCTCCTG CGCGTTTATGAAGTAGGACAGGCGGGGCCGTTTACTTTCATCATCTCCGAACACTCCCCCTATCCGCGTCTGGCGGATAT GAATACCCTTCCCCAAATATCTCCCCAGGCGGCGCTCAACCTGGTGCGCAACATGGCGGAAGGACTGCTGACGCTGCACC GGAAAAACATTTTTCACGGGGGCATCACGCCCAAGCTGATTTGCCTGCGCGAAGACGGCGGAGACGCCCTACTGCTGCCC ATCAACATTTATCCCGCCCAACCTCCGGTGGACATGGGGGACTTCGCCTCTCCGGAGTGGGTCACCGGAGCGGAAACCAC GTTCACGCCGGGCATGGATATTTACGCACTGGGGCTGGCGCTTTACATTCTGCTTACCCGCAAAACGCCGATGGAAGCGG GCTTTGCCATGCCCTCCTCGCTAATCAAATGCAGCGATGCCGTGGATTCGGCAGTCTCCCGCGCCATCAATCCGGATACC CGGGAACGCTACCGGGACCTGGGGGATTTCATCACGGATCTGGATAAAGCCATTGCCAATCCTGCGGGAAGAAATGCGGC CTCCATCCCTCCGCCGCCATCTTCCCCGGCCATTCCGGCCCTGAACATGCAAAAAGGGCAGTCCAACATCTATTACTATC TCATTCCGGCCCTGATCGTGGGCATTGTGCTGACCTATACCTGCATCCTGTATAAGAAGGATGTCGTTAGAATGCGCAAT GATTATAATGAACAGGTGCAAAAGGAAAATAACGCGAAAGCGGAAGCGGCAAGACAAGCGAACAGGGACGCGCGCCGCCA CGCTCCGGCCACCGCGCAAAACGCCGCTGCGGCCATTCCTTCACCTGTTCCGGCCACGCGTCCGGCGCAGGCGCCGGCAG TTCCCAAAGTTTCCGCGGAACCCGGCAAAGTCAATTGGAGCCTTCAACCCGGCGTCAAAGTTCGCCAGAGTTCCAACCGC AACATGCTGGGAGCTTACGGTCCGGAAAAGGCCGTTGACGGCAATACCAGCTCCAGGATTTCCGACGTTTCAATCAGCGC CACAGGCGTGGTTGAAGGGAAAACCGCCTGGTTCGGAATTGACTTCGGCAGGGAGACCAACCGCACCATAGAAAAGGTGG TCATTTACACGCCGGCCAACCTGACGCTGCTGGGCACCATGGAAAAATTCAAGGTAATCCTCTACGGCAATGACAAAAAC GTGCTGGCGGAAAAAACCTTCAGCACCACCCCTTCGGAAAAATCCACCAACGTCACTTCCTGGAAACTGGACGCTCCGGT CAAGGCGCGCGCCCTGCGCGTGGAATCCGCAAATCCCTCCCAGCCGCTGGCGTTGACGGAAGTGGAAGCGTACGGACCGG AAGATGTGGAGGACACACCGGCTCCCGCACCTGCGGAAAAATAA
Upstream 100 bases:
>100_bases TCAGGGCGTCCCGCCATCAAAATATGCCCGCTTATAGAGTTGCTTCCGTAGGGGAATTTAAGGTAGAGTGGGAATCAATA CTATTCCACCTCTCTTTTCC
Downstream 100 bases:
>100_bases TTATCCACGCAGCCCTGCTCCCGCTTACCCCCCTCCGGGGGCCATGCTGAAAACTACCGTTTCCTTTCCCCTTCCCGGAA AAGCAGGACGGGACAGGGCC
Product: serine/threonine protein kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 547; Mature: 546
Protein sequence:
>547_residues MSADDSFPMDQISSLFPQLENIQLVGAKGPQQIFTATLKSNFAPVMLRVVPTEEAGIFGWDPEFIVRSLTIVEQSHQGLL RVYEVGQAGPFTFIISEHSPYPRLADMNTLPQISPQAALNLVRNMAEGLLTLHRKNIFHGGITPKLICLREDGGDALLLP INIYPAQPPVDMGDFASPEWVTGAETTFTPGMDIYALGLALYILLTRKTPMEAGFAMPSSLIKCSDAVDSAVSRAINPDT RERYRDLGDFITDLDKAIANPAGRNAASIPPPPSSPAIPALNMQKGQSNIYYYLIPALIVGIVLTYTCILYKKDVVRMRN DYNEQVQKENNAKAEAARQANRDARRHAPATAQNAAAAIPSPVPATRPAQAPAVPKVSAEPGKVNWSLQPGVKVRQSSNR NMLGAYGPEKAVDGNTSSRISDVSISATGVVEGKTAWFGIDFGRETNRTIEKVVIYTPANLTLLGTMEKFKVILYGNDKN VLAEKTFSTTPSEKSTNVTSWKLDAPVKARALRVESANPSQPLALTEVEAYGPEDVEDTPAPAPAEK
Sequences:
>Translated_547_residues MSADDSFPMDQISSLFPQLENIQLVGAKGPQQIFTATLKSNFAPVMLRVVPTEEAGIFGWDPEFIVRSLTIVEQSHQGLL RVYEVGQAGPFTFIISEHSPYPRLADMNTLPQISPQAALNLVRNMAEGLLTLHRKNIFHGGITPKLICLREDGGDALLLP INIYPAQPPVDMGDFASPEWVTGAETTFTPGMDIYALGLALYILLTRKTPMEAGFAMPSSLIKCSDAVDSAVSRAINPDT RERYRDLGDFITDLDKAIANPAGRNAASIPPPPSSPAIPALNMQKGQSNIYYYLIPALIVGIVLTYTCILYKKDVVRMRN DYNEQVQKENNAKAEAARQANRDARRHAPATAQNAAAAIPSPVPATRPAQAPAVPKVSAEPGKVNWSLQPGVKVRQSSNR NMLGAYGPEKAVDGNTSSRISDVSISATGVVEGKTAWFGIDFGRETNRTIEKVVIYTPANLTLLGTMEKFKVILYGNDKN VLAEKTFSTTPSEKSTNVTSWKLDAPVKARALRVESANPSQPLALTEVEAYGPEDVEDTPAPAPAEK >Mature_546_residues SADDSFPMDQISSLFPQLENIQLVGAKGPQQIFTATLKSNFAPVMLRVVPTEEAGIFGWDPEFIVRSLTIVEQSHQGLLR VYEVGQAGPFTFIISEHSPYPRLADMNTLPQISPQAALNLVRNMAEGLLTLHRKNIFHGGITPKLICLREDGGDALLLPI NIYPAQPPVDMGDFASPEWVTGAETTFTPGMDIYALGLALYILLTRKTPMEAGFAMPSSLIKCSDAVDSAVSRAINPDTR ERYRDLGDFITDLDKAIANPAGRNAASIPPPPSSPAIPALNMQKGQSNIYYYLIPALIVGIVLTYTCILYKKDVVRMRND YNEQVQKENNAKAEAARQANRDARRHAPATAQNAAAAIPSPVPATRPAQAPAVPKVSAEPGKVNWSLQPGVKVRQSSNRN MLGAYGPEKAVDGNTSSRISDVSISATGVVEGKTAWFGIDFGRETNRTIEKVVIYTPANLTLLGTMEKFKVILYGNDKNV LAEKTFSTTPSEKSTNVTSWKLDAPVKARALRVESANPSQPLALTEVEAYGPEDVEDTPAPAPAEK
Specific function: Unknown
COG id: COG0515
COG function: function code RTKL; Serine/threonine protein kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59298; Mature: 59167
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADDSFPMDQISSLFPQLENIQLVGAKGPQQIFTATLKSNFAPVMLRVVPTEEAGIFGW CCCCCCCCHHHHHHHCCCHHCEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC DPEFIVRSLTIVEQSHQGLLRVYEVGQAGPFTFIISEHSPYPRLADMNTLPQISPQAALN CHHHHHHHHHHHHHHHHHHEEHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHH LVRNMAEGLLTLHRKNIFHGGITPKLICLREDGGDALLLPINIYPAQPPVDMGDFASPEW HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCE VTGAETTFTPGMDIYALGLALYILLTRKTPMEAGFAMPSSLIKCSDAVDSAVSRAINPDT ECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCH RERYRDLGDFITDLDKAIANPAGRNAASIPPPPSSPAIPALNMQKGQSNIYYYLIPALIV HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHH GIVLTYTCILYKKDVVRMRNDYNEQVQKENNAKAEAARQANRDARRHAPATAQNAAAAIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCC SPVPATRPAQAPAVPKVSAEPGKVNWSLQPGVKVRQSSNRNMLGAYGPEKAVDGNTSSRI CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCEEECCCCCCCCCCCCCCCE SDVSISATGVVEGKTAWFGIDFGRETNRTIEKVVIYTPANLTLLGTMEKFKVILYGNDKN EEEEEEEEEEECCCEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEHHHEEEEEEECCCC VLAEKTFSTTPSEKSTNVTSWKLDAPVKARALRVESANPSQPLALTEVEAYGPEDVEDTP EEEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCC APAPAEK CCCCCCC >Mature Secondary Structure SADDSFPMDQISSLFPQLENIQLVGAKGPQQIFTATLKSNFAPVMLRVVPTEEAGIFGW CCCCCCCHHHHHHHCCCHHCEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC DPEFIVRSLTIVEQSHQGLLRVYEVGQAGPFTFIISEHSPYPRLADMNTLPQISPQAALN CHHHHHHHHHHHHHHHHHHEEHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHH LVRNMAEGLLTLHRKNIFHGGITPKLICLREDGGDALLLPINIYPAQPPVDMGDFASPEW HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCE VTGAETTFTPGMDIYALGLALYILLTRKTPMEAGFAMPSSLIKCSDAVDSAVSRAINPDT ECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCH RERYRDLGDFITDLDKAIANPAGRNAASIPPPPSSPAIPALNMQKGQSNIYYYLIPALIV HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHH GIVLTYTCILYKKDVVRMRNDYNEQVQKENNAKAEAARQANRDARRHAPATAQNAAAAIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCC SPVPATRPAQAPAVPKVSAEPGKVNWSLQPGVKVRQSSNRNMLGAYGPEKAVDGNTSSRI CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCEEECCCCCCCCCCCCCCCE SDVSISATGVVEGKTAWFGIDFGRETNRTIEKVVIYTPANLTLLGTMEKFKVILYGNDKN EEEEEEEEEEECCCEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEHHHEEEEEEECCCC VLAEKTFSTTPSEKSTNVTSWKLDAPVKARALRVESANPSQPLALTEVEAYGPEDVEDTP EEEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCC APAPAEK CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA