| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is prsA [H]
Identifier: 187734680
GI number: 187734680
Start: 204502
End: 205575
Strand: Direct
Name: prsA [H]
Synonym: Amuc_0167
Alternate gene names: 187734680
Gene position: 204502-205575 (Clockwise)
Preceding gene: 187734679
Following gene: 187734681
Centisome position: 7.68
GC content: 58.57
Gene sequence:
>1074_bases ATGTCTCCCACTGGAAAATTCACGCTCAGGCTTGTGATTTATGGAGCCTTCCTGCTCTATCTGGTGGGAGACTTGTTTGT CTGGCACGGCTTTCTGGCCGGCAGGATGGACGCGTACCTGAAACCGTTGCCGGGGCCGCCAGGAGACAACTCCGCCCGGA TAGCGGAAGTGTACGGGGAACCCGTCACCGCCAACCAGCTTTCCCGAAGAATGACGGAACTGAAAATGCTGCGCCAGCCT CCCGTGCTGGATATGGAAGGCGGGATCAAACTTACTCATGAACTGGACATCCCCGGCGACCTGGCTCCGCGGGCCAGGTA TGACCTGATCGGCTCCTCCCTTCTGCGCCTGAAAACCAGCGTCAATGACCTCCAGCTCCCCAACCGCAACGCGGAAGCGG CACGCGCCGTGGAACAAATCCGGTCCCGTTTTGACGGAGACACGGAACAATACCTGAAAACCCTGCATGGTCAGAAATTG ACGCAGGAACAATTTCAAAAAAAAATAGCGGCCAGGCTCAAACAGACGGAACAGCTCTACCGGGCAACCGCCCAGGCGGC GGAAGCGTCCGACGAAGACCTGAAAACCTACTACAACCTGATCCGGGACCAGCTCACCCCTCCTGATCTGCGGAAAACCA GGCACATCTTCCTGGCTACCCTGAACAGGGAAGAAGCCCAGGTCCGGCAAACCGCGGAAACGCTGCTGGAGCGGCTGAAG GCAGGGGAATCCTTCTCCCGGCTCGCCAGGGAATTCAGTGAAGACGAACGTTCCGCTCCCGCAGGCGGGGAACTCGGCTG GATAAGCCCCGCCCGCGCCAAGGAAACCCTGGGTCTGGCGTTGGCAGACGTCCCGGACAACAGGCCGGTACTTCTCAAAA GCCGGTGGGGGTGGCACCTTGTGGAAGCATCCCCTGTCAAAAAAGGGAAAACGCCATCCTATGAAGAAGCGCTTCCGGCC CTGAGGGATGCAGCCCGGAGCCTCAGAAAAGCTCAAGCCGTGGGATTGTACATGGACGGCCTTTTTGAAGAAGCCCATCT CAGAAACCGCATTAAAAACAAGCAGGGCCGCTGA
Upstream 100 bases:
>100_bases CATTGAAAAGAAGAGATTCCGCAACTTCCTTCCTCCGGAATCCGCCCGCCTGGCAGACTCCGGCGGCGGAAACTAAGCTC TTTGCCCTCCTTCTCCTGCC
Downstream 100 bases:
>100_bases CGCCCCAATTCCGACAAACGGGCCTTCGCAAAAATCGGAAACATCAGGCCCGCCTGCCTTTACACCTGAACATTCCCGCA GGCCCTCCGGCTTCCAGACC
Product: PpiC-type peptidyl-prolyl cis-trans isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MSPTGKFTLRLVIYGAFLLYLVGDLFVWHGFLAGRMDAYLKPLPGPPGDNSARIAEVYGEPVTANQLSRRMTELKMLRQP PVLDMEGGIKLTHELDIPGDLAPRARYDLIGSSLLRLKTSVNDLQLPNRNAEAARAVEQIRSRFDGDTEQYLKTLHGQKL TQEQFQKKIAARLKQTEQLYRATAQAAEASDEDLKTYYNLIRDQLTPPDLRKTRHIFLATLNREEAQVRQTAETLLERLK AGESFSRLAREFSEDERSAPAGGELGWISPARAKETLGLALADVPDNRPVLLKSRWGWHLVEASPVKKGKTPSYEEALPA LRDAARSLRKAQAVGLYMDGLFEEAHLRNRIKNKQGR
Sequences:
>Translated_357_residues MSPTGKFTLRLVIYGAFLLYLVGDLFVWHGFLAGRMDAYLKPLPGPPGDNSARIAEVYGEPVTANQLSRRMTELKMLRQP PVLDMEGGIKLTHELDIPGDLAPRARYDLIGSSLLRLKTSVNDLQLPNRNAEAARAVEQIRSRFDGDTEQYLKTLHGQKL TQEQFQKKIAARLKQTEQLYRATAQAAEASDEDLKTYYNLIRDQLTPPDLRKTRHIFLATLNREEAQVRQTAETLLERLK AGESFSRLAREFSEDERSAPAGGELGWISPARAKETLGLALADVPDNRPVLLKSRWGWHLVEASPVKKGKTPSYEEALPA LRDAARSLRKAQAVGLYMDGLFEEAHLRNRIKNKQGR >Mature_356_residues SPTGKFTLRLVIYGAFLLYLVGDLFVWHGFLAGRMDAYLKPLPGPPGDNSARIAEVYGEPVTANQLSRRMTELKMLRQPP VLDMEGGIKLTHELDIPGDLAPRARYDLIGSSLLRLKTSVNDLQLPNRNAEAARAVEQIRSRFDGDTEQYLKTLHGQKLT QEQFQKKIAARLKQTEQLYRATAQAAEASDEDLKTYYNLIRDQLTPPDLRKTRHIFLATLNREEAQVRQTAETLLERLKA GESFSRLAREFSEDERSAPAGGELGWISPARAKETLGLALADVPDNRPVLLKSRWGWHLVEASPVKKGKTPSYEEALPAL RDAARSLRKAQAVGLYMDGLFEEAHLRNRIKNKQGR
Specific function: Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins [H]
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PpiC domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023059 - InterPro: IPR000297 - InterPro: IPR023058 - InterPro: IPR015391 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase; PF09312 SurA_N [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 40182; Mature: 40051
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: PS01096 PPIC_PPIASE_1 ; PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTGKFTLRLVIYGAFLLYLVGDLFVWHGFLAGRMDAYLKPLPGPPGDNSARIAEVYGE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCC PVTANQLSRRMTELKMLRQPPVLDMEGGIKLTHELDIPGDLAPRARYDLIGSSLLRLKTS CCCHHHHHHHHHHHHHHCCCCCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH VNDLQLPNRNAEAARAVEQIRSRFDGDTEQYLKTLHGQKLTQEQFQKKIAARLKQTEQLY HHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH RATAQAAEASDEDLKTYYNLIRDQLTPPDLRKTRHIFLATLNREEAQVRQTAETLLERLK HHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHH AGESFSRLAREFSEDERSAPAGGELGWISPARAKETLGLALADVPDNRPVLLKSRWGWHL CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEECCCCCCCEEEECCCCEEE VEASPVKKGKTPSYEEALPALRDAARSLRKAQAVGLYMDGLFEEAHLRNRIKNKQGR EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SPTGKFTLRLVIYGAFLLYLVGDLFVWHGFLAGRMDAYLKPLPGPPGDNSARIAEVYGE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCC PVTANQLSRRMTELKMLRQPPVLDMEGGIKLTHELDIPGDLAPRARYDLIGSSLLRLKTS CCCHHHHHHHHHHHHHHCCCCCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH VNDLQLPNRNAEAARAVEQIRSRFDGDTEQYLKTLHGQKLTQEQFQKKIAARLKQTEQLY HHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH RATAQAAEASDEDLKTYYNLIRDQLTPPDLRKTRHIFLATLNREEAQVRQTAETLLERLK HHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHH AGESFSRLAREFSEDERSAPAGGELGWISPARAKETLGLALADVPDNRPVLLKSRWGWHL CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEECCCCCCCEEEECCCCEEE VEASPVKKGKTPSYEEALPALRDAARSLRKAQAVGLYMDGLFEEAHLRNRIKNKQGR EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA