| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734681
Identifier: 187734681
GI number: 187734681
Start: 205998
End: 207545
Strand: Direct
Name: 187734681
Synonym: Amuc_0168
Alternate gene names: NA
Gene position: 205998-207545 (Clockwise)
Preceding gene: 187734680
Following gene: 187734682
Centisome position: 7.73
GC content: 52.26
Gene sequence:
>1548_bases ATGAATGGTAACTTATTTAAAATTGTACTGGTTTCAGTCGTTGCCATTCTTTTAGCCATCATAGGCGGCATCATGTCGGC GGACGGCGATCCCTTTTCTATAGTTCTGGCTGTTTCCCCCTTTATCCTGGCCGCCTTATTCCTGATGAAGGGAAAAGTGT GGTATCTGTGGATACTGATACCCATTCTTTTCCTGCCCATCCCCTCCTTAAGGGATTACGCTCCCCTTCTTGCTTACGGA ATAACCCTTCCTTGTTACTTGTGGAACGCCATGCTCAGGCGTTCAAGCTTGACGTGGAATTCCGCCCCCCTTCTGGACGC TGTCGTCCTCGTGCTGTTCATGCACGTGGGCTATATCTTCCTGAGCCACCCTTTCGCTCTGGGGCTGGATGTGCTGGAAG ACTACTACGGAGGCAAGGGATACATCCTTTTCCTCCAGGCCCTCCTGGCCTATCTCTGCCTATCCTCGTTAAAAACGACC AGCCATGAACTGGGCAAGGTGCTTCAATGGGCTGTTTTCCTGACCATCGTTTTTACCCTTATCCTAACCGCCCGGAGCCT CCTTTCTCCGGATAGCGCCGGGGCGGATCTTGCCGCGAGCGCGGGCTCCGCAGGCACACTCTCCGAAAACTCCCGGAACT CTTCCTTCCTCAGAATTTCTATCTTGGTGATGCAGCTGCTCATCATCAACTACTCCGTGTGGCAGATGATCAAGCGTCCC TGGTGGGGGGCGTTGCTTCTTCTTGGAACCGTTGGCATCCTGTTAAGCGGATTTCGCTCCGCCATGGCCCAGGTTCTGTT CCTGTTCTTCACCATATCCCTAATTTACAGAAGATGGTTCTTCTGCCTTCTGGCTCCCGTCCTCGGAGTGCTATTGCTCT TGCTGCTCTCCTCTGCGGGCATGCTCCATTCTCTGCCTTTCGGCATCCAGAGAACCCTCTCAGCCGTTCCTTTCCTGGAC GTCAGCGCGCAAGCCAAGGCAAACGCCGAAGACTCCATCAACTGGCGCTTTGAAATGTGGAGCTGGGCTCTGGATGACCG TGAACACTTTATTCAGGACAAAATATTCGGAGACGGCTTTTCACGGGACATCAGCATCGTGAAAGCCAATGTATATGAAG AAGCCTACAACCTGAGCAAAGACCAAAGCGCCTTTGCGTGGAACGGCCAATGGCACAGCGGCCCCATTTCCACGATTCAA ACGCTCGGCTACATAGGGATTTCCCTGTACCTTATCCTGTCCGTCGTTGGCATGACCTACGCATGGATCGTCAGTAGAAT TTACCGCAACCATCAATACAAGCTCGGCATCCTGTATGTTTCCGCCGTCTATTTCACCAAACCAATCTTCTTTTTCCTGA TCTTTGGGGAAAGCATCACTATTGCGATGGACATCATATCCCTGGCCATCATCAAAGTACTCTACTCCTGCGCCAAGAGG GAGGGCCTCTATGTATCTCTCCATGTCCGCAAGGAATACATGCCGCTCATGATCCGGAAAACACAGGAAAAACGGCAAGC CGCCGCAACGGCATCCATTTCCGGCTGA
Upstream 100 bases:
>100_bases TCGTTCGCAATGAGAAGGTCAGGGGTTCGAATCCCCTATACTCCACCATCCATCTCTCTTTCCCGCTACTGTTTTTTATT CGGGAATAACGGGTAGCCTT
Downstream 100 bases:
>100_bases CTGTTCCTTCCCGGGAAAAACAGGCGTCCCCTATGCTTGAGGCTGGACTAATTCAAAGGGAGTTGCTACCTTTCGGGGCG GTTCCTTTTCCCATGGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 515; Mature: 515
Protein sequence:
>515_residues MNGNLFKIVLVSVVAILLAIIGGIMSADGDPFSIVLAVSPFILAALFLMKGKVWYLWILIPILFLPIPSLRDYAPLLAYG ITLPCYLWNAMLRRSSLTWNSAPLLDAVVLVLFMHVGYIFLSHPFALGLDVLEDYYGGKGYILFLQALLAYLCLSSLKTT SHELGKVLQWAVFLTIVFTLILTARSLLSPDSAGADLAASAGSAGTLSENSRNSSFLRISILVMQLLIINYSVWQMIKRP WWGALLLLGTVGILLSGFRSAMAQVLFLFFTISLIYRRWFFCLLAPVLGVLLLLLLSSAGMLHSLPFGIQRTLSAVPFLD VSAQAKANAEDSINWRFEMWSWALDDREHFIQDKIFGDGFSRDISIVKANVYEEAYNLSKDQSAFAWNGQWHSGPISTIQ TLGYIGISLYLILSVVGMTYAWIVSRIYRNHQYKLGILYVSAVYFTKPIFFFLIFGESITIAMDIISLAIIKVLYSCAKR EGLYVSLHVRKEYMPLMIRKTQEKRQAAATASISG
Sequences:
>Translated_515_residues MNGNLFKIVLVSVVAILLAIIGGIMSADGDPFSIVLAVSPFILAALFLMKGKVWYLWILIPILFLPIPSLRDYAPLLAYG ITLPCYLWNAMLRRSSLTWNSAPLLDAVVLVLFMHVGYIFLSHPFALGLDVLEDYYGGKGYILFLQALLAYLCLSSLKTT SHELGKVLQWAVFLTIVFTLILTARSLLSPDSAGADLAASAGSAGTLSENSRNSSFLRISILVMQLLIINYSVWQMIKRP WWGALLLLGTVGILLSGFRSAMAQVLFLFFTISLIYRRWFFCLLAPVLGVLLLLLLSSAGMLHSLPFGIQRTLSAVPFLD VSAQAKANAEDSINWRFEMWSWALDDREHFIQDKIFGDGFSRDISIVKANVYEEAYNLSKDQSAFAWNGQWHSGPISTIQ TLGYIGISLYLILSVVGMTYAWIVSRIYRNHQYKLGILYVSAVYFTKPIFFFLIFGESITIAMDIISLAIIKVLYSCAKR EGLYVSLHVRKEYMPLMIRKTQEKRQAAATASISG >Mature_515_residues MNGNLFKIVLVSVVAILLAIIGGIMSADGDPFSIVLAVSPFILAALFLMKGKVWYLWILIPILFLPIPSLRDYAPLLAYG ITLPCYLWNAMLRRSSLTWNSAPLLDAVVLVLFMHVGYIFLSHPFALGLDVLEDYYGGKGYILFLQALLAYLCLSSLKTT SHELGKVLQWAVFLTIVFTLILTARSLLSPDSAGADLAASAGSAGTLSENSRNSSFLRISILVMQLLIINYSVWQMIKRP WWGALLLLGTVGILLSGFRSAMAQVLFLFFTISLIYRRWFFCLLAPVLGVLLLLLLSSAGMLHSLPFGIQRTLSAVPFLD VSAQAKANAEDSINWRFEMWSWALDDREHFIQDKIFGDGFSRDISIVKANVYEEAYNLSKDQSAFAWNGQWHSGPISTIQ TLGYIGISLYLILSVVGMTYAWIVSRIYRNHQYKLGILYVSAVYFTKPIFFFLIFGESITIAMDIISLAIIKVLYSCAKR EGLYVSLHVRKEYMPLMIRKTQEKRQAAATASISG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57526; Mature: 57526
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGNLFKIVLVSVVAILLAIIGGIMSADGDPFSIVLAVSPFILAALFLMKGKVWYLWILI CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHH PILFLPIPSLRDYAPLLAYGITLPCYLWNAMLRRSSLTWNSAPLLDAVVLVLFMHVGYIF HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH LSHPFALGLDVLEDYYGGKGYILFLQALLAYLCLSSLKTTSHELGKVLQWAVFLTIVFTL HHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILTARSLLSPDSAGADLAASAGSAGTLSENSRNSSFLRISILVMQLLIINYSVWQMIKRP HHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC WWGALLLLGTVGILLSGFRSAMAQVLFLFFTISLIYRRWFFCLLAPVLGVLLLLLLSSAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC MLHSLPFGIQRTLSAVPFLDVSAQAKANAEDSINWRFEMWSWALDDREHFIQDKIFGDGF HHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCC SRDISIVKANVYEEAYNLSKDQSAFAWNGQWHSGPISTIQTLGYIGISLYLILSVVGMTY CCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AWIVSRIYRNHQYKLGILYVSAVYFTKPIFFFLIFGESITIAMDIISLAIIKVLYSCAKR HHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC EGLYVSLHVRKEYMPLMIRKTQEKRQAAATASISG CCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNGNLFKIVLVSVVAILLAIIGGIMSADGDPFSIVLAVSPFILAALFLMKGKVWYLWILI CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHH PILFLPIPSLRDYAPLLAYGITLPCYLWNAMLRRSSLTWNSAPLLDAVVLVLFMHVGYIF HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH LSHPFALGLDVLEDYYGGKGYILFLQALLAYLCLSSLKTTSHELGKVLQWAVFLTIVFTL HHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILTARSLLSPDSAGADLAASAGSAGTLSENSRNSSFLRISILVMQLLIINYSVWQMIKRP HHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC WWGALLLLGTVGILLSGFRSAMAQVLFLFFTISLIYRRWFFCLLAPVLGVLLLLLLSSAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC MLHSLPFGIQRTLSAVPFLDVSAQAKANAEDSINWRFEMWSWALDDREHFIQDKIFGDGF HHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCC SRDISIVKANVYEEAYNLSKDQSAFAWNGQWHSGPISTIQTLGYIGISLYLILSVVGMTY CCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AWIVSRIYRNHQYKLGILYVSAVYFTKPIFFFLIFGESITIAMDIISLAIIKVLYSCAKR HHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC EGLYVSLHVRKEYMPLMIRKTQEKRQAAATASISG CCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA