Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187734676

Identifier: 187734676

GI number: 187734676

Start: 201103

End: 201549

Strand: Direct

Name: 187734676

Synonym: Amuc_0163

Alternate gene names: NA

Gene position: 201103-201549 (Clockwise)

Preceding gene: 187734675

Following gene: 187734677

Centisome position: 7.55

GC content: 56.6

Gene sequence:

>447_bases
ATGGGACTGATCGACAAACTCAAGCGAACCTTCGTCACCCCCCTTGTGGAGGAAAAGGAAGAAGGGATGGCCATGGTCCG
GTCCCTCCGGGAAACCGGGACGGCAGCCCTGGCCCATGCGGAAGCCCTGGCCGCACTGCTCAAACTGGAACTGAAGGAAG
CGTCCAACAGGCTGGGCAAAAAAACGGCCTTTCTCCTGATGGGCGCCTTCATGGCCTTCTTCGGCTATCTATTTCTGTGG
TGCCTTCTGACTGTGGTCATGGCGTATTTCTGGGGAATCATCGCTGGGCTTGCCGTAACCACGGGCTTTCATCTCCTGGC
CGCCGCAGCCGGGTTCATCCTTTTCAGCCGAACCCATGTAACGCCTATCGCTCCGGCGACGGCGGAAGAACTTAAAACGG
ATTTATCATGTCTGCAAATGGCTCTCAAGAAAAGCTCGCACTCCTGA

Upstream 100 bases:

>100_bases
TCTCATCGGTCTGCTTATCCGCCGTCGTTAACCCTCTCCCTTCATCCCGCGCCATGCGTGCCATGCGCATGGCGTCCTCC
TTCCCCTTTCAAACCGAACC

Downstream 100 bases:

>100_bases
TGCGGGTAGCTTCCTCCCGGCTGGACATCGTCAATGAGGCGGACAGCCTGGTGCAAAAGACACAGCAGCAGGCCGACCAC
TTCCGTAAATTGAAAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MGLIDKLKRTFVTPLVEEKEEGMAMVRSLRETGTAALAHAEALAALLKLELKEASNRLGKKTAFLLMGAFMAFFGYLFLW
CLLTVVMAYFWGIIAGLAVTTGFHLLAAAAGFILFSRTHVTPIAPATAEELKTDLSCLQMALKKSSHS

Sequences:

>Translated_148_residues
MGLIDKLKRTFVTPLVEEKEEGMAMVRSLRETGTAALAHAEALAALLKLELKEASNRLGKKTAFLLMGAFMAFFGYLFLW
CLLTVVMAYFWGIIAGLAVTTGFHLLAAAAGFILFSRTHVTPIAPATAEELKTDLSCLQMALKKSSHS
>Mature_147_residues
GLIDKLKRTFVTPLVEEKEEGMAMVRSLRETGTAALAHAEALAALLKLELKEASNRLGKKTAFLLMGAFMAFFGYLFLWC
LLTVVMAYFWGIIAGLAVTTGFHLLAAAAGFILFSRTHVTPIAPATAEELKTDLSCLQMALKKSSHS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16096; Mature: 15965

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLIDKLKRTFVTPLVEEKEEGMAMVRSLRETGTAALAHAEALAALLKLELKEASNRLGK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTAFLLMGAFMAFFGYLFLWCLLTVVMAYFWGIIAGLAVTTGFHLLAAAAGFILFSRTHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TPIAPATAEELKTDLSCLQMALKKSSHS
CCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GLIDKLKRTFVTPLVEEKEEGMAMVRSLRETGTAALAHAEALAALLKLELKEASNRLGK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTAFLLMGAFMAFFGYLFLWCLLTVVMAYFWGIIAGLAVTTGFHLLAAAAGFILFSRTHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TPIAPATAEELKTDLSCLQMALKKSSHS
CCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA