| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734677
Identifier: 187734677
GI number: 187734677
Start: 201549
End: 201893
Strand: Direct
Name: 187734677
Synonym: Amuc_0164
Alternate gene names: NA
Gene position: 201549-201893 (Clockwise)
Preceding gene: 187734676
Following gene: 187734678
Centisome position: 7.57
GC content: 53.04
Gene sequence:
>345_bases ATGCGGGTAGCTTCCTCCCGGCTGGACATCGTCAATGAGGCGGACAGCCTGGTGCAAAAGACACAGCAGCAGGCCGACCA CTTCCGTAAATTGAAAAAAAAGGCCATGTCCCTGCCTGTAATCGGCTCTATTGTCGGAACGGTGGGAGGCGTTCTTCTCA TCCGCATGTTTGCGGGGAAAAAAAGCAATCCGGCCCCTCCCCCGCAGCCGCGCACTTCCGGAAGCTGGGTTAATTCCTCC ATCTTCCGTTTCATCGTTGAAATTCTGATTACCCTGGCTTTCCCTTCCCTGAAAAAAATGGGGATCGGCCTGGCCGGCAA AAAATTCCTCAACCTGTTCAAATAA
Upstream 100 bases:
>100_bases GCCGAACCCATGTAACGCCTATCGCTCCGGCGACGGCGGAAGAACTTAAAACGGATTTATCATGTCTGCAAATGGCTCTC AAGAAAAGCTCGCACTCCTG
Downstream 100 bases:
>100_bases CAGGCTTTTCAGGCCAATACAGCGGTTTTCTGCCACTTCTTGAAAAAGGTTCGGGAACTCCGCTGCCGTAAAAAATGGGG ATGTTCCCGCGCCGTTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MRVASSRLDIVNEADSLVQKTQQQADHFRKLKKKAMSLPVIGSIVGTVGGVLLIRMFAGKKSNPAPPPQPRTSGSWVNSS IFRFIVEILITLAFPSLKKMGIGLAGKKFLNLFK
Sequences:
>Translated_114_residues MRVASSRLDIVNEADSLVQKTQQQADHFRKLKKKAMSLPVIGSIVGTVGGVLLIRMFAGKKSNPAPPPQPRTSGSWVNSS IFRFIVEILITLAFPSLKKMGIGLAGKKFLNLFK >Mature_114_residues MRVASSRLDIVNEADSLVQKTQQQADHFRKLKKKAMSLPVIGSIVGTVGGVLLIRMFAGKKSNPAPPPQPRTSGSWVNSS IFRFIVEILITLAFPSLKKMGIGLAGKKFLNLFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12465; Mature: 12465
Theoretical pI: Translated: 11.82; Mature: 11.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVASSRLDIVNEADSLVQKTQQQADHFRKLKKKAMSLPVIGSIVGTVGGVLLIRMFAGK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC KSNPAPPPQPRTSGSWVNSSIFRFIVEILITLAFPSLKKMGIGLAGKKFLNLFK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure MRVASSRLDIVNEADSLVQKTQQQADHFRKLKKKAMSLPVIGSIVGTVGGVLLIRMFAGK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC KSNPAPPPQPRTSGSWVNSSIFRFIVEILITLAFPSLKKMGIGLAGKKFLNLFK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA