| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734671
Identifier: 187734671
GI number: 187734671
Start: 196424
End: 197830
Strand: Direct
Name: 187734671
Synonym: Amuc_0158
Alternate gene names: NA
Gene position: 196424-197830 (Clockwise)
Preceding gene: 187734662
Following gene: 187734672
Centisome position: 7.37
GC content: 60.98
Gene sequence:
>1407_bases ATGCTGAAGACAGGATTAATCCAACCGGAAACCATTCCCGGCCACTTTCCCCGAAATCTCAGAACCATCGTGGAACTGTA CCGTTCCTGCCTGGACGCAGGCGCGGAGCTCGTCCTCTGTCCGCCGCTGGCCCTCAGCGGCGTGCATACCGGGGAACTGG CTCTGCGCAGCGGCTTCCGGACCCAGCACCGGGCGACCCTGGCCTATCTGGCACGGGAAATAGCGGACGTCCCCCTGCTG CTGGGAGCGACGGACGCGGAAGGCATAAGATTCCACCTGTTGAGGAACGGCCTTTCCTTTCCCCGGCAGGCCGTTATCCC TCCCTCCCCGCATGGAAAAGAACGCGTTCCCGTCTTTGGCATCTGGAGAACGGAGGATGAGGCAGTTTTTTCCATCGCCC CGTGGGGAGAAATTCCTCCTCCGCACGTTTCCGCCACATGCCTGCTGCTCCGCACGCCTGCCAATGCATGGCATGAGGGA TTGCTGGAACAGGATGAGGAAGAAGCCCACCTGACGGCGCGGGAAACAGGCCTGCCCGTATTCACGGCCCGCCTGGCCGG GGGAGAAGGTCCGTTTCTGCTGCCCGGCGCATCTTCCGTATGGTCCGGCAATGAAAATCTTCTCAAACGGCTGCGTCTTT TTGAACGGGATTCCGCCGTCATCTCACCGGAAAACTCCACAGGAACGGACTCCCCCCTGCCCTCCCCGGAACAACAGCTC CGGCACGCCCTCCGCAAAGGAATGGAAGATTTCATTCTGAAAAGCGGGTACGGGGCCGTCTGCCTGAATTTGCTGGAAAA TTCCGCATCCCTCCTGTTGGCGGAACTATTGAAGGAAACGTGCCCCTCTCTGGAAGTGACGGGGTTCCTCCCCTCCCTGC CCGGCATTCCGGAAGAAACACGGGAAAGAGTTCAAGCCTTCGCCGGCACGGCTGGCATTGGCGTACGGACGGTTTCTTTC CCTGCCAAAGCCGGAGGGCTGGACGAAAAAGCTGCAATCGCGTGGCTCATGCGCCAATGGGCGGAAGAAGAAGGCGCCCT GCTGCTCTCTTCTCTGACGGGGACGGATATCATGACGGCGCCCCGCTTTCTTCCAGCCGCTTTAGCCGCGGATTTCATGC CGCTGGGGGATTTATACGAAACGGAACTGGCAAACCTGTTCCCCGGTTTTATTTCTCCCGCTCCGGAGGCCGCCAGGCGC GACGGGTTTCTCATCCGCCTGCACCGGGAACATGAATCCGCCACGGAGCTGGCGAATCGGTTCCCGGAATCGGAAAGGGA AATCCGCCGTCTGCAGCGGCAGGCCCGCGCATCCGAATGGACACGCCTGAAACTGCCGCCGCGCCTCATGCTGCGCTCCA TCCCCGGAACGCAGGAAACGCCTTATATCCATCGGCTGGCAGACTGA
Upstream 100 bases:
>100_bases AGCTCCTTGCGATAAAAACTGCATGGGTAAATGCCTGGCGGGCAGACCTCCGGGCATCCCGGCTTGCCCGCCACCCCGTA ATGGTCTACCTTTCCGTCGC
Downstream 100 bases:
>100_bases CGCGGAACCTCCCTTTTCCTCCCGTGGCATACATTGCGCTTGCTCTTGAAGAGGAAGAAGTGATTAGTAGAAGCCATGCA ATTCCATGTAGCAACCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MLKTGLIQPETIPGHFPRNLRTIVELYRSCLDAGAELVLCPPLALSGVHTGELALRSGFRTQHRATLAYLAREIADVPLL LGATDAEGIRFHLLRNGLSFPRQAVIPPSPHGKERVPVFGIWRTEDEAVFSIAPWGEIPPPHVSATCLLLRTPANAWHEG LLEQDEEEAHLTARETGLPVFTARLAGGEGPFLLPGASSVWSGNENLLKRLRLFERDSAVISPENSTGTDSPLPSPEQQL RHALRKGMEDFILKSGYGAVCLNLLENSASLLLAELLKETCPSLEVTGFLPSLPGIPEETRERVQAFAGTAGIGVRTVSF PAKAGGLDEKAAIAWLMRQWAEEEGALLLSSLTGTDIMTAPRFLPAALAADFMPLGDLYETELANLFPGFISPAPEAARR DGFLIRLHREHESATELANRFPESEREIRRLQRQARASEWTRLKLPPRLMLRSIPGTQETPYIHRLAD
Sequences:
>Translated_468_residues MLKTGLIQPETIPGHFPRNLRTIVELYRSCLDAGAELVLCPPLALSGVHTGELALRSGFRTQHRATLAYLAREIADVPLL LGATDAEGIRFHLLRNGLSFPRQAVIPPSPHGKERVPVFGIWRTEDEAVFSIAPWGEIPPPHVSATCLLLRTPANAWHEG LLEQDEEEAHLTARETGLPVFTARLAGGEGPFLLPGASSVWSGNENLLKRLRLFERDSAVISPENSTGTDSPLPSPEQQL RHALRKGMEDFILKSGYGAVCLNLLENSASLLLAELLKETCPSLEVTGFLPSLPGIPEETRERVQAFAGTAGIGVRTVSF PAKAGGLDEKAAIAWLMRQWAEEEGALLLSSLTGTDIMTAPRFLPAALAADFMPLGDLYETELANLFPGFISPAPEAARR DGFLIRLHREHESATELANRFPESEREIRRLQRQARASEWTRLKLPPRLMLRSIPGTQETPYIHRLAD >Mature_468_residues MLKTGLIQPETIPGHFPRNLRTIVELYRSCLDAGAELVLCPPLALSGVHTGELALRSGFRTQHRATLAYLAREIADVPLL LGATDAEGIRFHLLRNGLSFPRQAVIPPSPHGKERVPVFGIWRTEDEAVFSIAPWGEIPPPHVSATCLLLRTPANAWHEG LLEQDEEEAHLTARETGLPVFTARLAGGEGPFLLPGASSVWSGNENLLKRLRLFERDSAVISPENSTGTDSPLPSPEQQL RHALRKGMEDFILKSGYGAVCLNLLENSASLLLAELLKETCPSLEVTGFLPSLPGIPEETRERVQAFAGTAGIGVRTVSF PAKAGGLDEKAAIAWLMRQWAEEEGALLLSSLTGTDIMTAPRFLPAALAADFMPLGDLYETELANLFPGFISPAPEAARR DGFLIRLHREHESATELANRFPESEREIRRLQRQARASEWTRLKLPPRLMLRSIPGTQETPYIHRLAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51391; Mature: 51391
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTGLIQPETIPGHFPRNLRTIVELYRSCLDAGAELVLCPPLALSGVHTGELALRSGFR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHCCCCCHHHHHHCCCC TQHRATLAYLAREIADVPLLLGATDAEGIRFHLLRNGLSFPRQAVIPPSPHGKERVPVFG HHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE IWRTEDEAVFSIAPWGEIPPPHVSATCLLLRTPANAWHEGLLEQDEEEAHLTARETGLPV EEECCCCCEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCCE FTARLAGGEGPFLLPGASSVWSGNENLLKRLRLFERDSAVISPENSTGTDSPLPSPEQQL EEEEECCCCCCEECCCCCHHCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHH RHALRKGMEDFILKSGYGAVCLNLLENSASLLLAELLKETCPSLEVTGFLPSLPGIPEET HHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHH RERVQAFAGTAGIGVRTVSFPAKAGGLDEKAAIAWLMRQWAEEEGALLLSSLTGTDIMTA HHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHC PRFLPAALAADFMPLGDLYETELANLFPGFISPAPEAARRDGFLIRLHREHESATELANR CHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEEECHHHHHHHHHHH FPESEREIRRLQRQARASEWTRLKLPPRLMLRSIPGTQETPYIHRLAD CCCHHHHHHHHHHHHHHCCCEEECCCHHHHHHCCCCCCCCCCHHCCCC >Mature Secondary Structure MLKTGLIQPETIPGHFPRNLRTIVELYRSCLDAGAELVLCPPLALSGVHTGELALRSGFR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHCCCCCHHHHHHCCCC TQHRATLAYLAREIADVPLLLGATDAEGIRFHLLRNGLSFPRQAVIPPSPHGKERVPVFG HHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE IWRTEDEAVFSIAPWGEIPPPHVSATCLLLRTPANAWHEGLLEQDEEEAHLTARETGLPV EEECCCCCEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCCE FTARLAGGEGPFLLPGASSVWSGNENLLKRLRLFERDSAVISPENSTGTDSPLPSPEQQL EEEEECCCCCCEECCCCCHHCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHH RHALRKGMEDFILKSGYGAVCLNLLENSASLLLAELLKETCPSLEVTGFLPSLPGIPEET HHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHH RERVQAFAGTAGIGVRTVSFPAKAGGLDEKAAIAWLMRQWAEEEGALLLSSLTGTDIMTA HHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHC PRFLPAALAADFMPLGDLYETELANLFPGFISPAPEAARRDGFLIRLHREHESATELANR CHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEEECHHHHHHHHHHH FPESEREIRRLQRQARASEWTRLKLPPRLMLRSIPGTQETPYIHRLAD CCCHHHHHHHHHHHHHHCCCEEECCCHHHHHHCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA