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The map label for this gene is yrbE [C]

Identifier: 187734672

GI number: 187734672

Start: 197906

End: 198706

Strand: Direct

Name: yrbE [C]

Synonym: Amuc_0159

Alternate gene names: 187734672

Gene position: 197906-198706 (Clockwise)

Preceding gene: 187734671

Following gene: 187734673

Centisome position: 7.43

GC content: 57.43

Gene sequence:

>801_bases
ATGCAATTCCATGTAGCAACCATGATCGGCCGCGCCGCTTTAAGGCTGGTTGACCGGTTGGGGTCAATCGGATTGCTGCT
TTATCAAGTGGCTTCATGCATGTGGTCCGGCCAATTCCGGATGCGCGTGCTTGTGGAGCAAATTGCAAAAATCGGGGTAC
AATCCCAGCCGGTGGTCATCATCACCGGCGCGTTCACCGGCGCGGTGCTGGAAGCCCAGACACTATTCCAGCTTCAAACG
GTGAGAATGGAAACCATGGGCGGGGCCGTCGTCGCCGTGGGCATGTTCCGGGAACTGGGGCCCGTCATCACCGGGCTGAT
GCTTGCGGGGCGCGTCGGATCCGCCATGGCCGCGGAAATCGGCACCATGAAAGTCACGGAACAGGTGGATGCCCTTAAAT
CCATGAATGTGGATCCGGTAGACTACCTGGTGAAGCCGCGGATACAGGCCATGCTTATTTCCATGCCCATCCTGATGATG
GAAGCCGTTCTGGTGGGCATCGCCTCCGCGTACATCGTCAGCGTCACCGCCTTTAACGTAGACCAGGCCTACTGGATGCA
CTTCATGAGCAAATTCGTCACCATGGGGGACATCATCGTAGCCCTGGTCAAGGCTCTTGCTTTCGGCCTCATCATTTCCA
CCATCTCCTGCCGGGAGGGGCTGAACACCACGAACGGCGCCGTGGGCGTAGGCAAATCCACCATGCAGGCCATGGTGTAC
GCTTCCGTGGCCCTGCTCATCGCCAACTTTATCCTGACCATGATCCTCAACTCTTTCTTCCCCATGGGATTCATGAGATA
G

Upstream 100 bases:

>100_bases
TTATATCCATCGGCTGGCAGACTGACGCGGAACCTCCCTTTTCCTCCCGTGGCATACATTGCGCTTGCTCTTGAAGAGGA
AGAAGTGATTAGTAGAAGCC

Downstream 100 bases:

>100_bases
CCTTTCCCCTCCGCCATGCAGCCATTCATCCGCGTCCATCAGCTCAGACAAAGCTTCGGCACCCAGAAAGTGCTGAAAGG
CGTAAGCTTTGACGTGGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MQFHVATMIGRAALRLVDRLGSIGLLLYQVASCMWSGQFRMRVLVEQIAKIGVQSQPVVIITGAFTGAVLEAQTLFQLQT
VRMETMGGAVVAVGMFRELGPVITGLMLAGRVGSAMAAEIGTMKVTEQVDALKSMNVDPVDYLVKPRIQAMLISMPILMM
EAVLVGIASAYIVSVTAFNVDQAYWMHFMSKFVTMGDIIVALVKALAFGLIISTISCREGLNTTNGAVGVGKSTMQAMVY
ASVALLIANFILTMILNSFFPMGFMR

Sequences:

>Translated_266_residues
MQFHVATMIGRAALRLVDRLGSIGLLLYQVASCMWSGQFRMRVLVEQIAKIGVQSQPVVIITGAFTGAVLEAQTLFQLQT
VRMETMGGAVVAVGMFRELGPVITGLMLAGRVGSAMAAEIGTMKVTEQVDALKSMNVDPVDYLVKPRIQAMLISMPILMM
EAVLVGIASAYIVSVTAFNVDQAYWMHFMSKFVTMGDIIVALVKALAFGLIISTISCREGLNTTNGAVGVGKSTMQAMVY
ASVALLIANFILTMILNSFFPMGFMR
>Mature_266_residues
MQFHVATMIGRAALRLVDRLGSIGLLLYQVASCMWSGQFRMRVLVEQIAKIGVQSQPVVIITGAFTGAVLEAQTLFQLQT
VRMETMGGAVVAVGMFRELGPVITGLMLAGRVGSAMAAEIGTMKVTEQVDALKSMNVDPVDYLVKPRIQAMLISMPILMM
EAVLVGIASAYIVSVTAFNVDQAYWMHFMSKFVTMGDIIVALVKALAFGLIISTISCREGLNTTNGAVGVGKSTMQAMVY
ASVALLIANFILTMILNSFFPMGFMR

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=251, Percent_Identity=33.0677290836653, Blast_Score=142, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 28678; Mature: 28678

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
8.6 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
8.6 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA