| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187734650
Identifier: 187734650
GI number: 187734650
Start: 169490
End: 170860
Strand: Reverse
Name: 187734650
Synonym: Amuc_0137
Alternate gene names: NA
Gene position: 170860-169490 (Counterclockwise)
Preceding gene: 187734652
Following gene: 187734644
Centisome position: 6.41
GC content: 58.94
Gene sequence:
>1371_bases ATGGGTTTTGCCGGAGCGTGTCAACCCCTCCGGGGGACAGGCGATGATGCATTCCTTCCCCATATTCTTTTCAAGGAACC TGTTCCGGAAGAACGGGAGACGGAAAAAGGGTTGCGTCCGCGGGACAATGTGGTAGCTTGTGCGGGCAAAGGGAACCCTA TGACCTTACCTGTAAAGATTCTGTCCGTATTGGCAGGGCTGAGCCTGGCGGGAAGCGCCCGGGCGCGCATTTGGACGAAT GACCGGGGCGCTACCGTCGTAGCCGTGCTGGTGGCCGTCCGTGATGCGGAGGTGGATTTGAAGCTTCAGGATGGTCGCGT GGTGGCTGTTCCCAAGAATATTTTTTCCGGAGCCGACCAGGAATATATTCTGGAATGGGTAAAGTCTGGCGGGACGCTCC CCGATACTGATGTGGGGGCTGAGAATCCTCCTGTGCAGGGGGATTCCGGCAGACGGTACGTTCCCCTGGAGCCGAATTGG GATGCTCCCTGGCCGGAGAGGGTGGTTGTTCCCGGTTTCCTGCTGGTGAAAACCGTGCAGGAGACGGAGGAGCTGAGTGT GTATGAAACGGATCATTTCATCATGGAGTCTCCCGGAAAGCTGCCGGAAGCGGAGCGTATGATCCTTGCCCGGCGTTTTG AAACCATTCTGTCCGCCCTGGCAGCTGTTCCGTTGAATCTGGCGGTGGCCCGCCGGCCTTCCCGCAAGTATCTGGTGAGG GTATGTTTCCAGGAAGAGGATTTCAACAGGGCTCCGGGCCTGCGGAACGGGCATCTCAAGTTTTCCCCTACCAGTTTCAC GGCTCTGCTGTTGCGGGATAAAAAGGGAAAGCTGCTGAAGCCGGGACTGGATCCGCGCTTTGCCGTCACGCACTGGGCGG CGCAGTCCATGGATTGGGATCACTGGCTGGTGGACGGCTTTTCCGCGTACATGGCTTTTCTTCCCATGGAGAAGGAAGCG CCGGTATTCCGGAAGATTCCGGAAAGGCTGGCCGCGATGGTTCCGCGCGCCGTCCGCACGGGCAGAGAAGCTCTGCCGGC CCTGGCGGACATGCTGTCCAGGGATTCAGCACATTCCGCCGCGGAGCATGGCGTTTCCTCCAGGGGAGGAACGCTTCAGT ATTGGGCCGATTTGTTGTGGATGGTTTACTGGAGCCACCTGGAAGGGAGCGGAAAGGCGGAGCGCCTCAGAAGCTATTTG AGGGTTCGTGATGCGGAGGGCGGCGGGAAGGCGCGTGCTGTTTTGCTGGATGGGAAGACTCCGGAGGATGTACAGGGGGA AATGGTCGCGGCCTGGAAAAAAATGGGATTGAGGCTGAGATTTTCTCAGCCGGCTTCTGCTGCCGCGGACAGGGAGTCTG CGGGAAAATAA
Upstream 100 bases:
>100_bases GAACATGATGCCCAGAGCCGCCAGGGTGACGACAGTCAGCGGAATATTTTTTCTGAGGGGACTGATATGCATGCCTTCTT TTCCTTTCTTCCATAAGATT
Downstream 100 bases:
>100_bases CGGGAAGGGAGGGAAGAAAAACTCCTGCCGGGAAGGTGTGGGAAACCTGCGTCTCAAATGGTGCCGTTGAGTTTTCTCCC TATCCAGAACAGGGTAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MGFAGACQPLRGTGDDAFLPHILFKEPVPEERETEKGLRPRDNVVACAGKGNPMTLPVKILSVLAGLSLAGSARARIWTN DRGATVVAVLVAVRDAEVDLKLQDGRVVAVPKNIFSGADQEYILEWVKSGGTLPDTDVGAENPPVQGDSGRRYVPLEPNW DAPWPERVVVPGFLLVKTVQETEELSVYETDHFIMESPGKLPEAERMILARRFETILSALAAVPLNLAVARRPSRKYLVR VCFQEEDFNRAPGLRNGHLKFSPTSFTALLLRDKKGKLLKPGLDPRFAVTHWAAQSMDWDHWLVDGFSAYMAFLPMEKEA PVFRKIPERLAAMVPRAVRTGREALPALADMLSRDSAHSAAEHGVSSRGGTLQYWADLLWMVYWSHLEGSGKAERLRSYL RVRDAEGGGKARAVLLDGKTPEDVQGEMVAAWKKMGLRLRFSQPASAAADRESAGK
Sequences:
>Translated_456_residues MGFAGACQPLRGTGDDAFLPHILFKEPVPEERETEKGLRPRDNVVACAGKGNPMTLPVKILSVLAGLSLAGSARARIWTN DRGATVVAVLVAVRDAEVDLKLQDGRVVAVPKNIFSGADQEYILEWVKSGGTLPDTDVGAENPPVQGDSGRRYVPLEPNW DAPWPERVVVPGFLLVKTVQETEELSVYETDHFIMESPGKLPEAERMILARRFETILSALAAVPLNLAVARRPSRKYLVR VCFQEEDFNRAPGLRNGHLKFSPTSFTALLLRDKKGKLLKPGLDPRFAVTHWAAQSMDWDHWLVDGFSAYMAFLPMEKEA PVFRKIPERLAAMVPRAVRTGREALPALADMLSRDSAHSAAEHGVSSRGGTLQYWADLLWMVYWSHLEGSGKAERLRSYL RVRDAEGGGKARAVLLDGKTPEDVQGEMVAAWKKMGLRLRFSQPASAAADRESAGK >Mature_455_residues GFAGACQPLRGTGDDAFLPHILFKEPVPEERETEKGLRPRDNVVACAGKGNPMTLPVKILSVLAGLSLAGSARARIWTND RGATVVAVLVAVRDAEVDLKLQDGRVVAVPKNIFSGADQEYILEWVKSGGTLPDTDVGAENPPVQGDSGRRYVPLEPNWD APWPERVVVPGFLLVKTVQETEELSVYETDHFIMESPGKLPEAERMILARRFETILSALAAVPLNLAVARRPSRKYLVRV CFQEEDFNRAPGLRNGHLKFSPTSFTALLLRDKKGKLLKPGLDPRFAVTHWAAQSMDWDHWLVDGFSAYMAFLPMEKEAP VFRKIPERLAAMVPRAVRTGREALPALADMLSRDSAHSAAEHGVSSRGGTLQYWADLLWMVYWSHLEGSGKAERLRSYLR VRDAEGGGKARAVLLDGKTPEDVQGEMVAAWKKMGLRLRFSQPASAAADRESAGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50237; Mature: 50106
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFAGACQPLRGTGDDAFLPHILFKEPVPEERETEKGLRPRDNVVACAGKGNPMTLPVKI CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHCCCCCCCCEEEEECCCCCCCHHHHH LSVLAGLSLAGSARARIWTNDRGATVVAVLVAVRDAEVDLKLQDGRVVAVPKNIFSGADQ HHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEECCEEEEECHHHHCCCCH EYILEWVKSGGTLPDTDVGAENPPVQGDSGRRYVPLEPNWDAPWPERVVVPGFLLVKTVQ HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEECCCHHHHHHHH ETEELSVYETDHFIMESPGKLPEAERMILARRFETILSALAAVPLNLAVARRPSRKYLVR HHHHCEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH VCFQEEDFNRAPGLRNGHLKFSPTSFTALLLRDKKGKLLKPGLDPRFAVTHWAAQSMDWD EECCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCC HWLVDGFSAYMAFLPMEKEAPVFRKIPERLAAMVPRAVRTGREALPALADMLSRDSAHSA HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AEHGVSSRGGTLQYWADLLWMVYWSHLEGSGKAERLRSYLRVRDAEGGGKARAVLLDGKT HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCC PEDVQGEMVAAWKKMGLRLRFSQPASAAADRESAGK CCCCCHHHHHHHHHCCCEEEECCCCCHHCCHHCCCC >Mature Secondary Structure GFAGACQPLRGTGDDAFLPHILFKEPVPEERETEKGLRPRDNVVACAGKGNPMTLPVKI CCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHCCCCCCCCEEEEECCCCCCCHHHHH LSVLAGLSLAGSARARIWTNDRGATVVAVLVAVRDAEVDLKLQDGRVVAVPKNIFSGADQ HHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEECCEEEEECHHHHCCCCH EYILEWVKSGGTLPDTDVGAENPPVQGDSGRRYVPLEPNWDAPWPERVVVPGFLLVKTVQ HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEECCCHHHHHHHH ETEELSVYETDHFIMESPGKLPEAERMILARRFETILSALAAVPLNLAVARRPSRKYLVR HHHHCEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH VCFQEEDFNRAPGLRNGHLKFSPTSFTALLLRDKKGKLLKPGLDPRFAVTHWAAQSMDWD EECCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCC HWLVDGFSAYMAFLPMEKEAPVFRKIPERLAAMVPRAVRTGREALPALADMLSRDSAHSA HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AEHGVSSRGGTLQYWADLLWMVYWSHLEGSGKAERLRSYLRVRDAEGGGKARAVLLDGKT HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCC PEDVQGEMVAAWKKMGLRLRFSQPASAAADRESAGK CCCCCHHHHHHHHHCCCEEEECCCCCHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA