| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734649
Identifier: 187734649
GI number: 187734649
Start: 167238
End: 169436
Strand: Direct
Name: 187734649
Synonym: Amuc_0136
Alternate gene names: NA
Gene position: 167238-169436 (Clockwise)
Preceding gene: 187734648
Following gene: 187734651
Centisome position: 6.28
GC content: 58.16
Gene sequence:
>2199_bases ATGAACCTGAGCCTTCAACCTACTGCGTCAAGCGTCATCCTGACCGCCCTGGTTATGGCGGCCGGCATCTGGATGAGCTA TATCTCCTGCAAGCGCAACCGCCGGCCGCTGACATTCAAACTGGAAATTCTTCGCCTGGCAATCCTTGGCTTCATTTGCT TCCTGCTCTTCCAACCGGAATGGATCATCACCTCCGCCCCGCAGGAAAAACCCAAGGTTTCCATTCTGGAGGACCGCTCC GGCTCCATGGAAACGCAGGATGTTGAAATCTCCCCCCAGCATGTCGTCACACGCACGGCCTACGTGCAGGAACTGCTCAA GGGCAACAGTACGGAATTCCTTAAAGACACGCATGTAGTGGAATACGCCTCCTTCGGCGCGCCACCTGCGCCGGACTCTC CGGATTATGCCATGGCCGGCACAGACCTGGCCAAGCCGCTGGAGGACGCCATGCAATCCTCCGACAACCTCCGGGCGGTC ATCATGTTCACGGACGGCAGCCACAACGCCTCATCCTCCGTGCTGACGCAGGCCCAGCGCATGCGCACCAGGGGCATCCC CCTGTTCATCATTTCCGCAGGCAGCCCGTATCCCCTCCCGGACCTGGCCCTTCAGGACGTGAAAGCCCCCACTTACGGCA TCATCGGGGAAACGGTGCAAATACCCTTTACCATTAAAAGCACGCTGGGCAAAGAAACGCGCACCACGCTCATCATGACT TCCAGGGATACAGGAAAAACCGTCACCCGCACGGTCACCATTCCGGCCCAGGGGGAGGTATCCGACGCGGTTCTGTGGAA AATAGAAAAAGAAGGGGCGGAAACGCTGGAACTCAAACTCCCGGTCCAGCCCCAGGAACGGATGCACAATAATAACGCCT CTTCCTTCAGCATCTCCGGCAGGAGGGAATCCATCAAAGCACTGGTCATCGATACCCTGCCGCGCTGGGAATACCGCTTC ATCCGGAACGCCCTGTACCGGGATCCCGGCGTGGACGTGCATACCCTGCTCTTTCATCCGGAACTGGAAGAAATGGGGGA AGGCCCCGGGTACCTGGTCAAATTCCCGGACAGGATGGAAGACCTGGCCCGGTATGACGTCATCTTCATCGGAGACGTGG GGCTGGGCTCCAAAGGGCTGACGGAAGAACAGGCCTCCCTGCTCAAAGGCATGGTAAAAAACCAGGCCAGCGGCATCGTC TTCCTCCCCGGCTACCAGGGCAGGCAAATGGAACTCCTGAAATCGGAACTGGGGGACCTGATGCCCGTTACATTCCTCAA CACCAAGCCGGAGGGGACAACCCAGCCTTCCCCATCCCCCCTTATCCTGACGCCGGAAGGCCGCGGCTCCCTGCTTACCA TGCTGGCGGATACGGAGGGTGAAAACGAAGAAGTATGGCGCAATCTGCCGGGCTTCAACTGGTACGCCCCCGTGGAACGG CCCAAAGCGGGAAGCACTGTCCTGGCCGTGCATGCGGCGGATAAGAATGCCTATGGCCGCATTCCTCTTATTGTCACCCA GTCCTGCGGCAACGGAAAAGTCCTCTTCATGGGAACGGATTCCGCCTGGCGATGGAGGCGAGGAGTAGAAGACAAATACC ATTACCGTTTCTGGAGCCAGGTGGCCCGCTGGATGAGTTACCAGCGCAACATGGCCGCAGGGGAAAGAATCCGTCTGATT CCCACCCCGGAACGGCCCCGGCCGGGAGACACGCTGACCGTCACCGCCATGGTCTCCGACAAACTGGGGGCCCCTCTCCA GAATGGAGAGGTTTTTCTGGACATTACAACTCCGGAAGGAAGCTCCAGCCGCGTTCAAATGGACACTATGGACCATACAT GGGGCTCCTTTACCGCCTCCGTCAAAATCAACCGTCCCGGCACCTGGAAGCTCACAGCTTCATCCTCTGCGGAACCGGAT AAATCCGTTACGCTTCCCGTCATCACCATGAGTGAAACGCTGGAAAAAATAGGCAGCCCCGTCAATACCGCGCTAATGGA GGAAATGGCCTCCATCACACGCGGGCGCATGGTAAAAGCTGAGGAAATACAGCGGCTCATTAAGGAAATCAGGGATCTCC CGGTGCCGCCGCCCATGGAAACGCGCATCCTGCTCTGGTGCAACCCGTATACGCTCTCCATCCTCATCCTTCTGCTTACC CTGTTCTGGATAGGGAGAAAACTCAACGGCACCATTTGA
Upstream 100 bases:
>100_bases GGAAGCTCTTCCTGTTCTTCGTCCTCGCCTGCCTGCTGATGGAAGCCCTCCTGTGCCTGCCCGGCCAGACGGCCAAACGC CCCTCCCCCACCACCCGTCC
Downstream 100 bases:
>100_bases GACGCAGGTTTCCCACACCTTCCCGGCAGGAGTTTTTCTTCCCTCCCTTCCCGTTATTTTCCCGCAGACTCCCTGTCCGC GGCAGCAGAAGCCGGCTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide; En/Spm-Like Transposon Protein
Number of amino acids: Translated: 732; Mature: 732
Protein sequence:
>732_residues MNLSLQPTASSVILTALVMAAGIWMSYISCKRNRRPLTFKLEILRLAILGFICFLLFQPEWIITSAPQEKPKVSILEDRS GSMETQDVEISPQHVVTRTAYVQELLKGNSTEFLKDTHVVEYASFGAPPAPDSPDYAMAGTDLAKPLEDAMQSSDNLRAV IMFTDGSHNASSSVLTQAQRMRTRGIPLFIISAGSPYPLPDLALQDVKAPTYGIIGETVQIPFTIKSTLGKETRTTLIMT SRDTGKTVTRTVTIPAQGEVSDAVLWKIEKEGAETLELKLPVQPQERMHNNNASSFSISGRRESIKALVIDTLPRWEYRF IRNALYRDPGVDVHTLLFHPELEEMGEGPGYLVKFPDRMEDLARYDVIFIGDVGLGSKGLTEEQASLLKGMVKNQASGIV FLPGYQGRQMELLKSELGDLMPVTFLNTKPEGTTQPSPSPLILTPEGRGSLLTMLADTEGENEEVWRNLPGFNWYAPVER PKAGSTVLAVHAADKNAYGRIPLIVTQSCGNGKVLFMGTDSAWRWRRGVEDKYHYRFWSQVARWMSYQRNMAAGERIRLI PTPERPRPGDTLTVTAMVSDKLGAPLQNGEVFLDITTPEGSSSRVQMDTMDHTWGSFTASVKINRPGTWKLTASSSAEPD KSVTLPVITMSETLEKIGSPVNTALMEEMASITRGRMVKAEEIQRLIKEIRDLPVPPPMETRILLWCNPYTLSILILLLT LFWIGRKLNGTI
Sequences:
>Translated_732_residues MNLSLQPTASSVILTALVMAAGIWMSYISCKRNRRPLTFKLEILRLAILGFICFLLFQPEWIITSAPQEKPKVSILEDRS GSMETQDVEISPQHVVTRTAYVQELLKGNSTEFLKDTHVVEYASFGAPPAPDSPDYAMAGTDLAKPLEDAMQSSDNLRAV IMFTDGSHNASSSVLTQAQRMRTRGIPLFIISAGSPYPLPDLALQDVKAPTYGIIGETVQIPFTIKSTLGKETRTTLIMT SRDTGKTVTRTVTIPAQGEVSDAVLWKIEKEGAETLELKLPVQPQERMHNNNASSFSISGRRESIKALVIDTLPRWEYRF IRNALYRDPGVDVHTLLFHPELEEMGEGPGYLVKFPDRMEDLARYDVIFIGDVGLGSKGLTEEQASLLKGMVKNQASGIV FLPGYQGRQMELLKSELGDLMPVTFLNTKPEGTTQPSPSPLILTPEGRGSLLTMLADTEGENEEVWRNLPGFNWYAPVER PKAGSTVLAVHAADKNAYGRIPLIVTQSCGNGKVLFMGTDSAWRWRRGVEDKYHYRFWSQVARWMSYQRNMAAGERIRLI PTPERPRPGDTLTVTAMVSDKLGAPLQNGEVFLDITTPEGSSSRVQMDTMDHTWGSFTASVKINRPGTWKLTASSSAEPD KSVTLPVITMSETLEKIGSPVNTALMEEMASITRGRMVKAEEIQRLIKEIRDLPVPPPMETRILLWCNPYTLSILILLLT LFWIGRKLNGTI >Mature_732_residues MNLSLQPTASSVILTALVMAAGIWMSYISCKRNRRPLTFKLEILRLAILGFICFLLFQPEWIITSAPQEKPKVSILEDRS GSMETQDVEISPQHVVTRTAYVQELLKGNSTEFLKDTHVVEYASFGAPPAPDSPDYAMAGTDLAKPLEDAMQSSDNLRAV IMFTDGSHNASSSVLTQAQRMRTRGIPLFIISAGSPYPLPDLALQDVKAPTYGIIGETVQIPFTIKSTLGKETRTTLIMT SRDTGKTVTRTVTIPAQGEVSDAVLWKIEKEGAETLELKLPVQPQERMHNNNASSFSISGRRESIKALVIDTLPRWEYRF IRNALYRDPGVDVHTLLFHPELEEMGEGPGYLVKFPDRMEDLARYDVIFIGDVGLGSKGLTEEQASLLKGMVKNQASGIV FLPGYQGRQMELLKSELGDLMPVTFLNTKPEGTTQPSPSPLILTPEGRGSLLTMLADTEGENEEVWRNLPGFNWYAPVER PKAGSTVLAVHAADKNAYGRIPLIVTQSCGNGKVLFMGTDSAWRWRRGVEDKYHYRFWSQVARWMSYQRNMAAGERIRLI PTPERPRPGDTLTVTAMVSDKLGAPLQNGEVFLDITTPEGSSSRVQMDTMDHTWGSFTASVKINRPGTWKLTASSSAEPD KSVTLPVITMSETLEKIGSPVNTALMEEMASITRGRMVKAEEIQRLIKEIRDLPVPPPMETRILLWCNPYTLSILILLLT LFWIGRKLNGTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81334; Mature: 81334
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSLQPTASSVILTALVMAAGIWMSYISCKRNRRPLTFKLEILRLAILGFICFLLFQPE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCC WIITSAPQEKPKVSILEDRSGSMETQDVEISPQHVVTRTAYVQELLKGNSTEFLKDTHVV EEEECCCCCCCCEEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHHCCEE EYASFGAPPAPDSPDYAMAGTDLAKPLEDAMQSSDNLRAVIMFTDGSHNASSSVLTQAQR EHHHCCCCCCCCCCCCEECCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHH MRTRGIPLFIISAGSPYPLPDLALQDVKAPTYGIIGETVQIPFTIKSTLGKETRTTLIMT HHHCCCCEEEEECCCCCCCCCHHHHHCCCCCCEECCCEEEEEEEEHHHCCCCCCEEEEEE SRDTGKTVTRTVTIPAQGEVSDAVLWKIEKEGAETLELKLPVQPQERMHNNNASSFSISG ECCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHCCCCCCEEEECC RRESIKALVIDTLPRWEYRFIRNALYRDPGVDVHTLLFHPELEEMGEGPGYLVKFPDRME CHHCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCCCEEEECCHHHH DLARYDVIFIGDVGLGSKGLTEEQASLLKGMVKNQASGIVFLPGYQGRQMELLKSELGDL HHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCC MPVTFLNTKPEGTTQPSPSPLILTPEGRGSLLTMLADTEGENEEVWRNLPGFNWYAPVER CEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCHHHHHCCCCCCEECCCCC PKAGSTVLAVHAADKNAYGRIPLIVTQSCGNGKVLFMGTDSAWRWRRGVEDKYHYRFWSQ CCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHCCCCCHHHHHHHHH VARWMSYQRNMAAGERIRLIPTPERPRPGDTLTVTAMVSDKLGAPLQNGEVFLDITTPEG HHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCC SSSRVQMDTMDHTWGSFTASVKINRPGTWKLTASSSAEPDKSVTLPVITMSETLEKIGSP CCCEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCEEEEEEEHHHHHHHHCCC VNTALMEEMASITRGRMVKAEEIQRLIKEIRDLPVPPPMETRILLWCNPYTLSILILLLT HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHH LFWIGRKLNGTI HHHHCCCCCCCC >Mature Secondary Structure MNLSLQPTASSVILTALVMAAGIWMSYISCKRNRRPLTFKLEILRLAILGFICFLLFQPE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCC WIITSAPQEKPKVSILEDRSGSMETQDVEISPQHVVTRTAYVQELLKGNSTEFLKDTHVV EEEECCCCCCCCEEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHHCCEE EYASFGAPPAPDSPDYAMAGTDLAKPLEDAMQSSDNLRAVIMFTDGSHNASSSVLTQAQR EHHHCCCCCCCCCCCCEECCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHH MRTRGIPLFIISAGSPYPLPDLALQDVKAPTYGIIGETVQIPFTIKSTLGKETRTTLIMT HHHCCCCEEEEECCCCCCCCCHHHHHCCCCCCEECCCEEEEEEEEHHHCCCCCCEEEEEE SRDTGKTVTRTVTIPAQGEVSDAVLWKIEKEGAETLELKLPVQPQERMHNNNASSFSISG ECCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHCCCCCCEEEECC RRESIKALVIDTLPRWEYRFIRNALYRDPGVDVHTLLFHPELEEMGEGPGYLVKFPDRME CHHCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCCCEEEECCHHHH DLARYDVIFIGDVGLGSKGLTEEQASLLKGMVKNQASGIVFLPGYQGRQMELLKSELGDL HHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCC MPVTFLNTKPEGTTQPSPSPLILTPEGRGSLLTMLADTEGENEEVWRNLPGFNWYAPVER CEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCHHHHHCCCCCCEECCCCC PKAGSTVLAVHAADKNAYGRIPLIVTQSCGNGKVLFMGTDSAWRWRRGVEDKYHYRFWSQ CCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHCCCCCHHHHHHHHH VARWMSYQRNMAAGERIRLIPTPERPRPGDTLTVTAMVSDKLGAPLQNGEVFLDITTPEG HHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCC SSSRVQMDTMDHTWGSFTASVKINRPGTWKLTASSSAEPDKSVTLPVITMSETLEKIGSP CCCEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCEEEEEEEHHHHHHHHCCC VNTALMEEMASITRGRMVKAEEIQRLIKEIRDLPVPPPMETRILLWCNPYTLSILILLLT HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHH LFWIGRKLNGTI HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA