| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734648
Identifier: 187734648
GI number: 187734648
Start: 165259
End: 167241
Strand: Direct
Name: 187734648
Synonym: Amuc_0135
Alternate gene names: NA
Gene position: 165259-167241 (Clockwise)
Preceding gene: 187734647
Following gene: 187734649
Centisome position: 6.2
GC content: 62.13
Gene sequence:
>1983_bases ATGTCCTTCAACTCTCCCTGGCTGCTGTGGGCTCTCTTTGCAGCCTCCGTTCCCATCATCATCCACCTGGTCAACCGGTG GCGGCACCGTTCCGTCCCCTGGGCGGCCATGGAATTCCTTCTCCGTGCGGCCAGGGAAACACGTGGAACAAAAAAACTGC TGCACTATCTGATTCTGGCGCTGCGCGTGATGGCTGTGGCGGCACTGGTAACGGCCTTTGCGCGGCCCCTGCTCGGAAGC TTTTTCGGCTGGGGGAGCTCCGGATTGAATGAAGTCCTGCTGGTTCTGGATCGTTCCGCTTCCATGGATGCCCGGCCGGA CAAAACCAGCTCCCTCCGGGATGCCATCCCCCCGCTGGTGGAATCCACGTTCGCGCAGCTCGGCCACTGCCGCCTGTCCC TGCTTGATTCCGCCACCGGAACCGTGACCCAGATTCCCGCTCCGGAAGCCCTGGCGGATCTGACTGTAAGCAAGACAACG GATGGAGGCGCGGATATTCCGGCACTTCTGCAAAAAGCCATCCCGTACCTGGAAGAATCCGGCGCAGGAAAGACGGAAAT CTGGATTGCCTCGGACATGCAGGCCTCTTCCTGGAAGCCAGACTCCCCTCTCTGGCCCGGTGTGCGCCAGAGGCTGGCCG CCCTTCCCCTGCCCCCTTCCATCCGCATCATGGCCCTCCGCGACAGGCCGGAAAGCAACCGCGGCATCAGAGTCCGGCAG GCTCAGGTAAATAACGGGAAACTGGTGCTGGACCTGGAAGTGCTGCGGCAGGGTTTCAACCCCAACCAGCCGGAGGACGT GCCGGTGCAGCTTTCCGTGGATAACGCCTCCTCCTCCGCCACGCTGCAACTGGCAGGGGAAAACACCTCCATCCGGAAAG AAATACCCCTGCCGCAGGGCAAAGAATCCGGCTTCGGCTTCGTTGCGCTGCCTCATGACGACTTCATCAGGGATGACATT TCCTTCTTCACCTTCGCCCCCAAGCCTCTCGCCAACATCCTGATTTTCGGTCCTTCGGGAGAAGTGGGAAAAACCCTTTC CCTGATGTCCGCCCCTCCCGGCCTGCCCGGCAGGAAAGCAACGATGCCCGGCAATACGCGGGAAGCTCAGGCTAATCTGG CCTCCCAGTCCATGGTCGTCTGGTACGGGCCGCCGCCGCGCGCGGAAATGGAAAAAAAACTCCAGACATTCATTGAAGAA GGAGGAATAGCCCTTTTCCTGCCTGACGACACGGAACACGGAACACGGCATTCATTCCTGGGCGTTTCCTGGGGCGCGAC GGAGACGGCTCCGTCCGAACAATACTACCGTCTGGAAACGTGGGACCGGCAAAGGGGATTCCTCCGCGACGGTTCCGATC AGACACCCATCCCCGCCAACCGTCTCCGCGCCGTGCGTAGAAAACCCCTGCTGGGCAAATACCGCACTCTGGCCTCCTGG GATGACGGTTCCTGCGCTCTGGCCCAGGTCAGGGCCGGAACGGGGTCCGCTCTGTTCCTGGGAACGCTGCCCAGATATTC CTGGTCCAACCTGGCGGACGGCCACCTGCTGCTCCCCCTGCTCCAGCGCATGGCGGACCGGGGGGCGGAACGCTTTTCCA CCTCCATTTCCCTACGGGTGAATGACGCCTCCCTGCCGCAATCCGCCACGGACATCCCCGTGCGCCTGGATAATGCCCAG GGAAGCCACCCCTCCGGTTCTCCGGCCGATACGGCGGGCGTGTACCGACTGGGAGCACAGACCTACGCCGTGAACCGCCC CTGGCCGGAAGACATGCCTGACCAGATTACGGATGAAAAACTACACCTCCTTCTGCCGGAAGCTTCCATCAGTTCCATGC AGAGTGCAGAGGAAGCCCCCTCCCTGGTGCAGGAAGCATGGAAGCTCTTCCTGTTCTTCGTCCTCGCCTGCCTGCTGATG GAAGCCCTCCTGTGCCTGCCCGGCCAGACGGCCAAACGCCCCTCCCCCACCACCCGTCCATGA
Upstream 100 bases:
>100_bases AAACCGGGGAAATGACCCTTCACATCCTCCGGCAACTGCTTCCCGGCCCGCCCTCCGCCTGACCAGGCAGCTCTGACCCT CCAATTATCCCTGTCCCGCC
Downstream 100 bases:
>100_bases ACCTGAGCCTTCAACCTACTGCGTCAAGCGTCATCCTGACCGCCCTGGTTATGGCGGCCGGCATCTGGATGAGCTATATC TCCTGCAAGCGCAACCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 660; Mature: 659
Protein sequence:
>660_residues MSFNSPWLLWALFAASVPIIIHLVNRWRHRSVPWAAMEFLLRAARETRGTKKLLHYLILALRVMAVAALVTAFARPLLGS FFGWGSSGLNEVLLVLDRSASMDARPDKTSSLRDAIPPLVESTFAQLGHCRLSLLDSATGTVTQIPAPEALADLTVSKTT DGGADIPALLQKAIPYLEESGAGKTEIWIASDMQASSWKPDSPLWPGVRQRLAALPLPPSIRIMALRDRPESNRGIRVRQ AQVNNGKLVLDLEVLRQGFNPNQPEDVPVQLSVDNASSSATLQLAGENTSIRKEIPLPQGKESGFGFVALPHDDFIRDDI SFFTFAPKPLANILIFGPSGEVGKTLSLMSAPPGLPGRKATMPGNTREAQANLASQSMVVWYGPPPRAEMEKKLQTFIEE GGIALFLPDDTEHGTRHSFLGVSWGATETAPSEQYYRLETWDRQRGFLRDGSDQTPIPANRLRAVRRKPLLGKYRTLASW DDGSCALAQVRAGTGSALFLGTLPRYSWSNLADGHLLLPLLQRMADRGAERFSTSISLRVNDASLPQSATDIPVRLDNAQ GSHPSGSPADTAGVYRLGAQTYAVNRPWPEDMPDQITDEKLHLLLPEASISSMQSAEEAPSLVQEAWKLFLFFVLACLLM EALLCLPGQTAKRPSPTTRP
Sequences:
>Translated_660_residues MSFNSPWLLWALFAASVPIIIHLVNRWRHRSVPWAAMEFLLRAARETRGTKKLLHYLILALRVMAVAALVTAFARPLLGS FFGWGSSGLNEVLLVLDRSASMDARPDKTSSLRDAIPPLVESTFAQLGHCRLSLLDSATGTVTQIPAPEALADLTVSKTT DGGADIPALLQKAIPYLEESGAGKTEIWIASDMQASSWKPDSPLWPGVRQRLAALPLPPSIRIMALRDRPESNRGIRVRQ AQVNNGKLVLDLEVLRQGFNPNQPEDVPVQLSVDNASSSATLQLAGENTSIRKEIPLPQGKESGFGFVALPHDDFIRDDI SFFTFAPKPLANILIFGPSGEVGKTLSLMSAPPGLPGRKATMPGNTREAQANLASQSMVVWYGPPPRAEMEKKLQTFIEE GGIALFLPDDTEHGTRHSFLGVSWGATETAPSEQYYRLETWDRQRGFLRDGSDQTPIPANRLRAVRRKPLLGKYRTLASW DDGSCALAQVRAGTGSALFLGTLPRYSWSNLADGHLLLPLLQRMADRGAERFSTSISLRVNDASLPQSATDIPVRLDNAQ GSHPSGSPADTAGVYRLGAQTYAVNRPWPEDMPDQITDEKLHLLLPEASISSMQSAEEAPSLVQEAWKLFLFFVLACLLM EALLCLPGQTAKRPSPTTRP >Mature_659_residues SFNSPWLLWALFAASVPIIIHLVNRWRHRSVPWAAMEFLLRAARETRGTKKLLHYLILALRVMAVAALVTAFARPLLGSF FGWGSSGLNEVLLVLDRSASMDARPDKTSSLRDAIPPLVESTFAQLGHCRLSLLDSATGTVTQIPAPEALADLTVSKTTD GGADIPALLQKAIPYLEESGAGKTEIWIASDMQASSWKPDSPLWPGVRQRLAALPLPPSIRIMALRDRPESNRGIRVRQA QVNNGKLVLDLEVLRQGFNPNQPEDVPVQLSVDNASSSATLQLAGENTSIRKEIPLPQGKESGFGFVALPHDDFIRDDIS FFTFAPKPLANILIFGPSGEVGKTLSLMSAPPGLPGRKATMPGNTREAQANLASQSMVVWYGPPPRAEMEKKLQTFIEEG GIALFLPDDTEHGTRHSFLGVSWGATETAPSEQYYRLETWDRQRGFLRDGSDQTPIPANRLRAVRRKPLLGKYRTLASWD DGSCALAQVRAGTGSALFLGTLPRYSWSNLADGHLLLPLLQRMADRGAERFSTSISLRVNDASLPQSATDIPVRLDNAQG SHPSGSPADTAGVYRLGAQTYAVNRPWPEDMPDQITDEKLHLLLPEASISSMQSAEEAPSLVQEAWKLFLFFVLACLLME ALLCLPGQTAKRPSPTTRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72132; Mature: 72001
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFNSPWLLWALFAASVPIIIHLVNRWRHRSVPWAAMEFLLRAARETRGTKKLLHYLILA CCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH LRVMAVAALVTAFARPLLGSFFGWGSSGLNEVLLVLDRSASMDARPDKTSSLRDAIPPLV HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEHEEECCCCCCCCCCCCHHHHHHHHHHH ESTFAQLGHCRLSLLDSATGTVTQIPAPEALADLTVSKTTDGGADIPALLQKAIPYLEES HHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHC GAGKTEIWIASDMQASSWKPDSPLWPGVRQRLAALPLPPSIRIMALRDRPESNRGIRVRQ CCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEE AQVNNGKLVLDLEVLRQGFNPNQPEDVPVQLSVDNASSSATLQLAGENTSIRKEIPLPQG EECCCCEEEEEHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCEECCCCCCC KESGFGFVALPHDDFIRDDISFFTFAPKPLANILIFGPSGEVGKTLSLMSAPPGLPGRKA CCCCEEEEEECCCHHHHCCCHHEEECCCCCCEEEEECCCCCCCCEEHHHCCCCCCCCCCC TMPGNTREAQANLASQSMVVWYGPPPRAEMEKKLQTFIEEGGIALFLPDDTEHGTRHSFL CCCCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEE GVSWGATETAPSEQYYRLETWDRQRGFLRDGSDQTPIPANRLRAVRRKPLLGKYRTLASW EEECCCCCCCCCCCEEEECCCHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCC DDGSCALAQVRAGTGSALFLGTLPRYSWSNLADGHLLLPLLQRMADRGAERFSTSISLRV CCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCEEEEEE NDASLPQSATDIPVRLDNAQGSHPSGSPADTAGVYRLGAQTYAVNRPWPEDMPDQITDEK CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHEEECCEEEECCCCCCCCCCCHHCCCC LHLLLPEASISSMQSAEEAPSLVQEAWKLFLFFVLACLLMEALLCLPGQTAKRPSPTTRP EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SFNSPWLLWALFAASVPIIIHLVNRWRHRSVPWAAMEFLLRAARETRGTKKLLHYLILA CCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH LRVMAVAALVTAFARPLLGSFFGWGSSGLNEVLLVLDRSASMDARPDKTSSLRDAIPPLV HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEHEEECCCCCCCCCCCCHHHHHHHHHHH ESTFAQLGHCRLSLLDSATGTVTQIPAPEALADLTVSKTTDGGADIPALLQKAIPYLEES HHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHC GAGKTEIWIASDMQASSWKPDSPLWPGVRQRLAALPLPPSIRIMALRDRPESNRGIRVRQ CCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEE AQVNNGKLVLDLEVLRQGFNPNQPEDVPVQLSVDNASSSATLQLAGENTSIRKEIPLPQG EECCCCEEEEEHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCEECCCCCCC KESGFGFVALPHDDFIRDDISFFTFAPKPLANILIFGPSGEVGKTLSLMSAPPGLPGRKA CCCCEEEEEECCCHHHHCCCHHEEECCCCCCEEEEECCCCCCCCEEHHHCCCCCCCCCCC TMPGNTREAQANLASQSMVVWYGPPPRAEMEKKLQTFIEEGGIALFLPDDTEHGTRHSFL CCCCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEE GVSWGATETAPSEQYYRLETWDRQRGFLRDGSDQTPIPANRLRAVRRKPLLGKYRTLASW EEECCCCCCCCCCCEEEECCCHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCC DDGSCALAQVRAGTGSALFLGTLPRYSWSNLADGHLLLPLLQRMADRGAERFSTSISLRV CCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCEEEEEE NDASLPQSATDIPVRLDNAQGSHPSGSPADTAGVYRLGAQTYAVNRPWPEDMPDQITDEK CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHEEECCEEEECCCCCCCCCCCHHCCCC LHLLLPEASISSMQSAEEAPSLVQEAWKLFLFFVLACLLMEALLCLPGQTAKRPSPTTRP EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA