| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734639
Identifier: 187734639
GI number: 187734639
Start: 155648
End: 157957
Strand: Reverse
Name: 187734639
Synonym: Amuc_0126
Alternate gene names: NA
Gene position: 157957-155648 (Counterclockwise)
Preceding gene: 187734643
Following gene: 187734637
Centisome position: 5.93
GC content: 59.18
Gene sequence:
>2310_bases ATGACCGATCAGACAGGAACCCCTTCTTCGCCGGAACCTCCCAAATTGCGACGCCGTTTGGTAACGGCAGCCCCTGCGGC CGCACCCAAGGTAAAGTTTGTTTCTCCCGCCGCGGAAGGCGTGGAGGTTGTCAAGCCGCGTTTTCTCACTCCTGAGTTGC AGGCCAAGCTGGCTCAGGAGCAGGAGGAAGCCGCCCGCCGCGCAGCGGAACAGGCGGAAGCGGACAGGATTGCTGCGGAA AAAGCGGCTGCCGAGCAGGAAGCCGCCCGTATTGCTGCCGAAAAGGAGGCGGCGAGAATAGCTGCCGAGCAGGAAGCCGC AAGAATCAAGGCGGAGCAGGAGGCTGCCGAAGCCGCGCGCATTGCCGCAGAAAAGGAGGCCGCCCGTGTAGCTGCCGAAG AGGAAAGAGCGCGCCTTGCGGCGGAGCTGGAGAAAAAGGAAGCCGCTTCCGCTCCGCAGCCCGAGCCTTCCGTGGACGCC CAGATTCAGGATGCCCTTGCCAAGGTAGCGGAGGCCCAGAAAGCCCTGGCGGAGGCTCAGGCCGCTGCTCTGGCCCAGGC CGCAGGGGTAGCGCCTGCGGCTGTGCAGACCCCGGAACCGTCTGTTCCGGAGCCTGCTCCTGCGGGGGGGGCTCCCAAAT TGAAAGTTTTCAAGACGGCCGCGGCTCCCGCTGCGGCGGAAAAATCCCCGGTCGCCGCTCCGGAAAGCGCCGTTCCCAAG CTGAAAGTATTAAAATCCCCCGTGGGGGCAGCACCAGCTTCTTCCGTGGCTCCCGCTGCGGTTCCCCAGCCTGTGGTCGC CGAGGGAGTTTCCCCTGCCGCTGGCGCTCCTCCGGCGGGCGACGGCGGTATTCAGCCTCCCGCCGGAACGGAATCCGCCC GGGATATGGCCGCTTCCGTGGATAAATCCAAATCCCTGCTGCGGGGTGTTATTTATGGGGTATGCGCTTTGGTTGTCATC GCTGCCGGCGTAGGGATTTATGCATGGAGCACCAACAGCAAGAAAGAAAAGGTGGAAGGTGAGAACGCCCGCTTGAATGC GCTGGTCGTGGAAGGCGGGAAACTGGGCCGCAGCCGTCTGTTTGACTCCAAGAATCTCAGCCGTGTCCCGGATGTGAAAG TCGTTCCCGACGCGGAGGATGCCGCTCTGCTGCTCGCCAATGTGAGGGGAGTCAAGGGCAACAGGGAAAACTGGCCCGGC GCCGCCCACCTGGTTTCCATCATGGCCCAGATGGATGACAACATTGCCCGCCAGGTGGTGGAAGACATGAAAAAAAATGT CGGCAGGTACAGTAAGGAAAAATATTCCATGATGGTGACCCTTTTGGCCAAGTCTTCCAGCCCCGCCATGCGCGACATGC TGAAAGACCTGTACGCTTCCATCAGCGAAAGCAAGAATAAGAAGATCCAGGACAAGCAGGCCGTGGTGCTCAAGTACATG CGTTTTGCCATGAAGCTGGACGACCTTGACGACGTGATGAAGATCCTCCAGAAGAAGGATGCTTCCCCGGATTTGATTTC CTCCGCTTTCCGTACGGCGCGCTACCTGATTGACGAAGCTCCTCCAGCCAAGCGCAAGGCGCTTTCCTCCAAACTGCTCC AGTATCAGAAAGATATGCCGGAGGAAAACATCAAAATGCTCTACAAGCTGCTGGCCCGCACCGGTGATCCCAAGGTGCTG GACATGATGGAAAAGAGCTATAAGGAGGATACCAAAAAGGCGCTTGCCATCATTACCGCCTGGGGGGACTGGAATACGGA TGACGCCGTTCCGTACCTGTTCAAGGCCTGGAAAGACGAATCCCTGCATGAACGCGTGCGTTCCCAGGCCCATGATTCGA TTCTCCGCGTACTCTCCGTGGACCGTGACCGGGATGACAACGCCACGCTCAAGTTGTTTGACCCCCTTATTGCGGATGCC AAAACCAGCGAACGCCGCCAGTTTCTGGTTTCCGCATTCAAGAGACTCAGCAACCGCCCGTATGTGATTCGCCTGCTGGG CCGCATCAAGCAGACTGCGGAAGACCAGAGAAACGCGGTGGAACCAAAGTTCCAGGCTGCGGAGGAGGCCTTGTTCAAGG CGGAGGACAAGTTCAAGGCCAATCCCGGCGATGCGGCAGCCAAGGCCGATTATGAGGCCAAGGAAAAGATTTATAATGAG TTGTCCAGTCAGAAGACCGGGGAAGACAAGGTGATTGCGGCGGTGGACAAGGCTCTGGAAAAGGTCAGGAAGACGCCTGT TCCCACCAGGAAGGCCGCTTCTGCCGAGGACAGGGATGATGACGACTCTTCCGTGATTAAGACAATCTAA
Upstream 100 bases:
>100_bases CGGCGGCTGTTCCCCGCCCGTTTTCCAGACGGTATTTTGAGGTTGCAGGGGGCCGCGGAATCGTATAAAATCACTCCAAT TTCCCAGCCATTTTATCACG
Downstream 100 bases:
>100_bases ACGGTTTTAACGGCCGTATCCGAAAACCGGAGGGAAAATAATCCCTCCGGTTTTTTATGTGCGGGAGTGACAACCATGAT TGGCTGGCCGCTTCTGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 769; Mature: 768
Protein sequence:
>769_residues MTDQTGTPSSPEPPKLRRRLVTAAPAAAPKVKFVSPAAEGVEVVKPRFLTPELQAKLAQEQEEAARRAAEQAEADRIAAE KAAAEQEAARIAAEKEAARIAAEQEAARIKAEQEAAEAARIAAEKEAARVAAEEERARLAAELEKKEAASAPQPEPSVDA QIQDALAKVAEAQKALAEAQAAALAQAAGVAPAAVQTPEPSVPEPAPAGGAPKLKVFKTAAAPAAAEKSPVAAPESAVPK LKVLKSPVGAAPASSVAPAAVPQPVVAEGVSPAAGAPPAGDGGIQPPAGTESARDMAASVDKSKSLLRGVIYGVCALVVI AAGVGIYAWSTNSKKEKVEGENARLNALVVEGGKLGRSRLFDSKNLSRVPDVKVVPDAEDAALLLANVRGVKGNRENWPG AAHLVSIMAQMDDNIARQVVEDMKKNVGRYSKEKYSMMVTLLAKSSSPAMRDMLKDLYASISESKNKKIQDKQAVVLKYM RFAMKLDDLDDVMKILQKKDASPDLISSAFRTARYLIDEAPPAKRKALSSKLLQYQKDMPEENIKMLYKLLARTGDPKVL DMMEKSYKEDTKKALAIITAWGDWNTDDAVPYLFKAWKDESLHERVRSQAHDSILRVLSVDRDRDDNATLKLFDPLIADA KTSERRQFLVSAFKRLSNRPYVIRLLGRIKQTAEDQRNAVEPKFQAAEEALFKAEDKFKANPGDAAAKADYEAKEKIYNE LSSQKTGEDKVIAAVDKALEKVRKTPVPTRKAASAEDRDDDDSSVIKTI
Sequences:
>Translated_769_residues MTDQTGTPSSPEPPKLRRRLVTAAPAAAPKVKFVSPAAEGVEVVKPRFLTPELQAKLAQEQEEAARRAAEQAEADRIAAE KAAAEQEAARIAAEKEAARIAAEQEAARIKAEQEAAEAARIAAEKEAARVAAEEERARLAAELEKKEAASAPQPEPSVDA QIQDALAKVAEAQKALAEAQAAALAQAAGVAPAAVQTPEPSVPEPAPAGGAPKLKVFKTAAAPAAAEKSPVAAPESAVPK LKVLKSPVGAAPASSVAPAAVPQPVVAEGVSPAAGAPPAGDGGIQPPAGTESARDMAASVDKSKSLLRGVIYGVCALVVI AAGVGIYAWSTNSKKEKVEGENARLNALVVEGGKLGRSRLFDSKNLSRVPDVKVVPDAEDAALLLANVRGVKGNRENWPG AAHLVSIMAQMDDNIARQVVEDMKKNVGRYSKEKYSMMVTLLAKSSSPAMRDMLKDLYASISESKNKKIQDKQAVVLKYM RFAMKLDDLDDVMKILQKKDASPDLISSAFRTARYLIDEAPPAKRKALSSKLLQYQKDMPEENIKMLYKLLARTGDPKVL DMMEKSYKEDTKKALAIITAWGDWNTDDAVPYLFKAWKDESLHERVRSQAHDSILRVLSVDRDRDDNATLKLFDPLIADA KTSERRQFLVSAFKRLSNRPYVIRLLGRIKQTAEDQRNAVEPKFQAAEEALFKAEDKFKANPGDAAAKADYEAKEKIYNE LSSQKTGEDKVIAAVDKALEKVRKTPVPTRKAASAEDRDDDDSSVIKTI >Mature_768_residues TDQTGTPSSPEPPKLRRRLVTAAPAAAPKVKFVSPAAEGVEVVKPRFLTPELQAKLAQEQEEAARRAAEQAEADRIAAEK AAAEQEAARIAAEKEAARIAAEQEAARIKAEQEAAEAARIAAEKEAARVAAEEERARLAAELEKKEAASAPQPEPSVDAQ IQDALAKVAEAQKALAEAQAAALAQAAGVAPAAVQTPEPSVPEPAPAGGAPKLKVFKTAAAPAAAEKSPVAAPESAVPKL KVLKSPVGAAPASSVAPAAVPQPVVAEGVSPAAGAPPAGDGGIQPPAGTESARDMAASVDKSKSLLRGVIYGVCALVVIA AGVGIYAWSTNSKKEKVEGENARLNALVVEGGKLGRSRLFDSKNLSRVPDVKVVPDAEDAALLLANVRGVKGNRENWPGA AHLVSIMAQMDDNIARQVVEDMKKNVGRYSKEKYSMMVTLLAKSSSPAMRDMLKDLYASISESKNKKIQDKQAVVLKYMR FAMKLDDLDDVMKILQKKDASPDLISSAFRTARYLIDEAPPAKRKALSSKLLQYQKDMPEENIKMLYKLLARTGDPKVLD MMEKSYKEDTKKALAIITAWGDWNTDDAVPYLFKAWKDESLHERVRSQAHDSILRVLSVDRDRDDNATLKLFDPLIADAK TSERRQFLVSAFKRLSNRPYVIRLLGRIKQTAEDQRNAVEPKFQAAEEALFKAEDKFKANPGDAAAKADYEAKEKIYNEL SSQKTGEDKVIAAVDKALEKVRKTPVPTRKAASAEDRDDDDSSVIKTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82696; Mature: 82565
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQTGTPSSPEPPKLRRRLVTAAPAAAPKVKFVSPAAEGVEVVKPRFLTPELQAKLAQE CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHH QEEAARRAAEQAEADRIAAEKAAAEQEAARIAAEKEAARIAAEQEAARIKAEQEAAEAAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAAEKEAARVAAEEERARLAAELEKKEAASAPQPEPSVDAQIQDALAKVAEAQKALAEAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AAALAQAAGVAPAAVQTPEPSVPEPAPAGGAPKLKVFKTAAAPAAAEKSPVAAPESAVPK HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCHHHCCH LKVLKSPVGAAPASSVAPAAVPQPVVAEGVSPAAGAPPAGDGGIQPPAGTESARDMAASV HHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH DKSKSLLRGVIYGVCALVVIAAGVGIYAWSTNSKKEKVEGENARLNALVVEGGKLGRSRL HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCEEEEEEECCCCCCHHHH FDSKNLSRVPDVKVVPDAEDAALLLANVRGVKGNRENWPGAAHLVSIMAQMDDNIARQVV CCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH EDMKKNVGRYSKEKYSMMVTLLAKSSSPAMRDMLKDLYASISESKNKKIQDKQAVVLKYM HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RFAMKLDDLDDVMKILQKKDASPDLISSAFRTARYLIDEAPPAKRKALSSKLLQYQKDMP HHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC EENIKMLYKLLARTGDPKVLDMMEKSYKEDTKKALAIITAWGDWNTDDAVPYLFKAWKDE HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHCCC SLHERVRSQAHDSILRVLSVDRDRDDNATLKLFDPLIADAKTSERRQFLVSAFKRLSNRP HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHCCCC YVIRLLGRIKQTAEDQRNAVEPKFQAAEEALFKAEDKFKANPGDAAAKADYEAKEKIYNE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHH LSSQKTGEDKVIAAVDKALEKVRKTPVPTRKAASAEDRDDDDSSVIKTI HHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCC >Mature Secondary Structure TDQTGTPSSPEPPKLRRRLVTAAPAAAPKVKFVSPAAEGVEVVKPRFLTPELQAKLAQE CCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHH QEEAARRAAEQAEADRIAAEKAAAEQEAARIAAEKEAARIAAEQEAARIKAEQEAAEAAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAAEKEAARVAAEEERARLAAELEKKEAASAPQPEPSVDAQIQDALAKVAEAQKALAEAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AAALAQAAGVAPAAVQTPEPSVPEPAPAGGAPKLKVFKTAAAPAAAEKSPVAAPESAVPK HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCHHHCCH LKVLKSPVGAAPASSVAPAAVPQPVVAEGVSPAAGAPPAGDGGIQPPAGTESARDMAASV HHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH DKSKSLLRGVIYGVCALVVIAAGVGIYAWSTNSKKEKVEGENARLNALVVEGGKLGRSRL HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCEEEEEEECCCCCCHHHH FDSKNLSRVPDVKVVPDAEDAALLLANVRGVKGNRENWPGAAHLVSIMAQMDDNIARQVV CCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH EDMKKNVGRYSKEKYSMMVTLLAKSSSPAMRDMLKDLYASISESKNKKIQDKQAVVLKYM HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RFAMKLDDLDDVMKILQKKDASPDLISSAFRTARYLIDEAPPAKRKALSSKLLQYQKDMP HHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC EENIKMLYKLLARTGDPKVLDMMEKSYKEDTKKALAIITAWGDWNTDDAVPYLFKAWKDE HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHCCC SLHERVRSQAHDSILRVLSVDRDRDDNATLKLFDPLIADAKTSERRQFLVSAFKRLSNRP HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHCCCC YVIRLLGRIKQTAEDQRNAVEPKFQAAEEALFKAEDKFKANPGDAAAKADYEAKEKIYNE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHH LSSQKTGEDKVIAAVDKALEKVRKTPVPTRKAASAEDRDDDDSSVIKTI HHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA