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The map label for this gene is perM [C]

Identifier: 187734634

GI number: 187734634

Start: 148008

End: 149318

Strand: Direct

Name: perM [C]

Synonym: Amuc_0120

Alternate gene names: 187734634

Gene position: 148008-149318 (Clockwise)

Preceding gene: 187734633

Following gene: 187734635

Centisome position: 5.56

GC content: 56.14

Gene sequence:

>1311_bases
ATGAACAACGAACAACATCAAAATACCCACACTTCCGCCGCCCCCGCCATTCCCTCCCCCTTCCAGAAGAAAACCTGCTG
GCATGCCCTGACAGGCGTATCCATTCTGGTGATGCTGGGCATTGCGGCCTTCGTCATTTTTGAAGTAGTGGAACTTCTGG
GGTTTCTGGAACCGGTGCTCCTGCCCATCCTGATTGCCGCCGTCGTGGCGTATTTGCTGGAACCCATCGTTTCCTGGCTG
GTGCGTCTCAAATTCTCCCGTCCATGGGCCGTAGTCACGGTCATGTTTGCGGCTCTGGCCGTTCTGGTAGGCTTTGGAGC
CACGATTCTCCCTCCCCTGATCAGGCAGACGGATGAACTGATCGACAACCGGATGGAGCTATGGGACAAAACCTCCGAAC
TGATTGACTCCACCATTGAAATCCCCTTCATTTCCCGCACCATTGACAGTGTTTACAGCACCAGCCTGCGGGAACTGAAT
GCCAGCCATTATACGGAAGCGGAAGTCCATGACCTGAGAAACGCCCGGACCGCCCGGGAAAAGCTGGGAGCCTACATGAC
CATCAATTCCTCCTTTTACCAGGACAAGCTGATGAGCTGGCTCACTTCCGGGGGACGGGCCCTGTACAGCACCATAGGAA
TCATGGTCAGCATCCTGATCACGCCCATTTTCGCTTTTTACTTTCTGCTGGAGGCGGATAAAATCAAAGAGAAATGGCCC
AGCATCCTGCCCCTGAAAGTCTCCAAATTCAGAAAAGACGTGGTGGACACCATGGAGGAAATCAACGGCTACCTGATTTC
CTTCTTCCGCGGCCAAATGCTGGTAAGCATCATTGAAGGCATTCTGATTGCCATCTGCCTGAAACTGATAGGCCTGCCGT
ACGCCATCACCATCGGCGCCGCGGTCTGCGTGCTGGGCATCGTTCCCTACCTGGGCATCATCACCGCCTTTATCCCTGCG
GTGCTGCTGGCCTGGTTCACATGGGGGGATTTCCAGCACGTGCTGATTGTTTCGGGCATCTTCCTGGCCGTCAACCAATT
TGACGGATGGATCATCCAGCCGAAAATCGTGGGGGATTCCGTGGAACTCCACCCGCTCACGGTCATGTTTTCCGTGTTGA
TCTGGACACTCATCCTGGGCGGCTTGATCGGCGCCCTGCTGGCTGTCCCCCTGACAGCCGCCATCAAGGTCCTTTACAAG
CGGTACATCTGGCAAAATGCCAGCATGCGCCCCATGACGGACCCCGTGCTTCCGCCGGAACATCCCGGCGAACAGCCTCC
GGACCCCCCCGAAGGTTCGGCCCACGCTTAA

Upstream 100 bases:

>100_bases
GAGAAACTCCGGATGAAGCCTCTCCCGCAGCTGACGGGAAAACGGACAAGGCCTCCGCTGCCTGAGCCGGGCCAGCAACC
AGCCATCTCTCTACACCGGC

Downstream 100 bases:

>100_bases
ACAACGGCATCCTTCCGACCATCTTTTCCGGAAAATTATAATCACACACACCTGACAACATGAATAAATCCGCATTACAC
CTGATGCTTGCCATGGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MNNEQHQNTHTSAAPAIPSPFQKKTCWHALTGVSILVMLGIAAFVIFEVVELLGFLEPVLLPILIAAVVAYLLEPIVSWL
VRLKFSRPWAVVTVMFAALAVLVGFGATILPPLIRQTDELIDNRMELWDKTSELIDSTIEIPFISRTIDSVYSTSLRELN
ASHYTEAEVHDLRNARTAREKLGAYMTINSSFYQDKLMSWLTSGGRALYSTIGIMVSILITPIFAFYFLLEADKIKEKWP
SILPLKVSKFRKDVVDTMEEINGYLISFFRGQMLVSIIEGILIAICLKLIGLPYAITIGAAVCVLGIVPYLGIITAFIPA
VLLAWFTWGDFQHVLIVSGIFLAVNQFDGWIIQPKIVGDSVELHPLTVMFSVLIWTLILGGLIGALLAVPLTAAIKVLYK
RYIWQNASMRPMTDPVLPPEHPGEQPPDPPEGSAHA

Sequences:

>Translated_436_residues
MNNEQHQNTHTSAAPAIPSPFQKKTCWHALTGVSILVMLGIAAFVIFEVVELLGFLEPVLLPILIAAVVAYLLEPIVSWL
VRLKFSRPWAVVTVMFAALAVLVGFGATILPPLIRQTDELIDNRMELWDKTSELIDSTIEIPFISRTIDSVYSTSLRELN
ASHYTEAEVHDLRNARTAREKLGAYMTINSSFYQDKLMSWLTSGGRALYSTIGIMVSILITPIFAFYFLLEADKIKEKWP
SILPLKVSKFRKDVVDTMEEINGYLISFFRGQMLVSIIEGILIAICLKLIGLPYAITIGAAVCVLGIVPYLGIITAFIPA
VLLAWFTWGDFQHVLIVSGIFLAVNQFDGWIIQPKIVGDSVELHPLTVMFSVLIWTLILGGLIGALLAVPLTAAIKVLYK
RYIWQNASMRPMTDPVLPPEHPGEQPPDPPEGSAHA
>Mature_436_residues
MNNEQHQNTHTSAAPAIPSPFQKKTCWHALTGVSILVMLGIAAFVIFEVVELLGFLEPVLLPILIAAVVAYLLEPIVSWL
VRLKFSRPWAVVTVMFAALAVLVGFGATILPPLIRQTDELIDNRMELWDKTSELIDSTIEIPFISRTIDSVYSTSLRELN
ASHYTEAEVHDLRNARTAREKLGAYMTINSSFYQDKLMSWLTSGGRALYSTIGIMVSILITPIFAFYFLLEADKIKEKWP
SILPLKVSKFRKDVVDTMEEINGYLISFFRGQMLVSIIEGILIAICLKLIGLPYAITIGAAVCVLGIVPYLGIITAFIPA
VLLAWFTWGDFQHVLIVSGIFLAVNQFDGWIIQPKIVGDSVELHPLTVMFSVLIWTLILGGLIGALLAVPLTAAIKVLYK
RYIWQNASMRPMTDPVLPPEHPGEQPPDPPEGSAHA

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=344, Percent_Identity=25.5813953488372, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI87082271, Length=342, Percent_Identity=23.6842105263158, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 48354; Mature: 48354

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNEQHQNTHTSAAPAIPSPFQKKTCWHALTGVSILVMLGIAAFVIFEVVELLGFLEPVL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPILIAAVVAYLLEPIVSWLVRLKFSRPWAVVTVMFAALAVLVGFGATILPPLIRQTDEL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
IDNRMELWDKTSELIDSTIEIPFISRTIDSVYSTSLRELNASHYTEAEVHDLRNARTARE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHH
KLGAYMTINSSFYQDKLMSWLTSGGRALYSTIGIMVSILITPIFAFYFLLEADKIKEKWP
HCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SILPLKVSKFRKDVVDTMEEINGYLISFFRGQMLVSIIEGILIAICLKLIGLPYAITIGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AVCVLGIVPYLGIITAFIPAVLLAWFTWGDFQHVLIVSGIFLAVNQFDGWIIQPKIVGDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCC
VELHPLTVMFSVLIWTLILGGLIGALLAVPLTAAIKVLYKRYIWQNASMRPMTDPVLPPE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
HPGEQPPDPPEGSAHA
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNNEQHQNTHTSAAPAIPSPFQKKTCWHALTGVSILVMLGIAAFVIFEVVELLGFLEPVL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPILIAAVVAYLLEPIVSWLVRLKFSRPWAVVTVMFAALAVLVGFGATILPPLIRQTDEL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
IDNRMELWDKTSELIDSTIEIPFISRTIDSVYSTSLRELNASHYTEAEVHDLRNARTARE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHH
KLGAYMTINSSFYQDKLMSWLTSGGRALYSTIGIMVSILITPIFAFYFLLEADKIKEKWP
HCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SILPLKVSKFRKDVVDTMEEINGYLISFFRGQMLVSIIEGILIAICLKLIGLPYAITIGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AVCVLGIVPYLGIITAFIPAVLLAWFTWGDFQHVLIVSGIFLAVNQFDGWIIQPKIVGDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCC
VELHPLTVMFSVLIWTLILGGLIGALLAVPLTAAIKVLYKRYIWQNASMRPMTDPVLPPE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
HPGEQPPDPPEGSAHA
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]