Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734633

Identifier: 187734633

GI number: 187734633

Start: 146653

End: 147972

Strand: Direct

Name: 187734633

Synonym: Amuc_0119

Alternate gene names: NA

Gene position: 146653-147972 (Clockwise)

Preceding gene: 187734619

Following gene: 187734634

Centisome position: 5.5

GC content: 59.47

Gene sequence:

>1320_bases
ATGTTCCGTTCCTCCATCATGCTTCTGGCAACCATGCTGTGCGTTTCCTGCGTATCGCACCGGCCTATCCAGGACAGCAG
CTCCCCGCCCATTGACGCGGCCAATCCCCTGGACGGCACCCCCGTGGCGCTGGCGTGGAGCTCCGGAACGCAATTAATGA
TGGGCGTAGACACGGGAGCAGTCCAGACATCCCTGCTTTTCTCCCCGGCAGTGGAATCCATCGGCGCACGCCTGCGCGGC
AGGGGCGCCATGCGCACGGCCAACGTGCCCGTTTCCCTGAAGGATGACGGGGAACCCATTTCCCGGAAACAGGACGTAGT
AATGGCAGACCAGGCCCCGTATGACGGTTTGCTGGGCTGGGAATGCATCCGGAAATATGTGTGGAACATCAACTATCCCA
AACGCTCCCACCGTTTTTTCAATAAACTTCCCTCCAGAATAAAAAGCTGGAACAAGCTTTCCCTGATTCCCGGATCCGAC
TATCCGCAAATCGCGGACAGGCACGGAAGGCGCATCATTCTGGACACGGGAGCCCCCCACGCCGTTTACATCTCCAAAAA
ACGCTGGAATGCCATTAAGCAGGCCTACCCGGATGCGTTCGTCAGCGTCTATTCCGGCTATAGCCCCGCCGCAGGCGGCT
TTTACGCCCACGAATGCATGCATGTAAGCTCCTTCCAGCTCGGTCCACTGGAATTAAAAAATATCCTGCTCTGTGAAAGC
TTCGCCAACCCGGAAGTGATGGGCATCCCCGATGACATCGACATCATCCTGGGCTACGGCGCTCTGGCCGCACGCCAGTT
CTGGCTGGACGGCCCGGGGAACGCCCTTTATTTCAGCTCCACCAGCCACCGGATGCCCGCCCCCGCCTCCTTCAACCTGA
TGGGAGGCACCTTTATCCAGGACAGCAACGGGAACGGCCCCATGAAAGCTTACGTGGCAGAGTGGTCTCCCGCATGGGAC
GCCGGCCTCAGGACGGGAGATGTGCTTATTTCCATCAATGGAAGAAAGAATCCCTATCCGGACCTCGTAGAATATGTTAC
CACCCAGCGGGGGGCTCAGGCCAGCGTGGTGGTCCAGCGCAGGAACAGGCTGGTGCGCATCCAATGGGAAGTTCCGGCCG
CGCCCCCTGCCGGGGATTATTACCCCACGCCCCAGGCCATTACGGAACAGGAATTCGAAAACCACGTCAGGCAGCAGGAA
AAAAAAGAACAGACCCAGCCCTCCGCAGACGGCCAGCAGCCTCCGGCTACGGCCGGAGAAACTCCGGATGAAGCCTCTCC
CGCAGCTGACGGGAAAACGGACAAGGCCTCCGCTGCCTGA

Upstream 100 bases:

>100_bases
GCAGGCAGCGGTTTTTACGTTCTGATGCCGTCAAAAAGCCCTGTAAGCAGGAAGGAAACCTTGCCAGCCTATGGTCTGTT
TGTTATGAACGGAATACTTT

Downstream 100 bases:

>100_bases
GCCGGGCCAGCAACCAGCCATCTCTCTACACCGGCATGAACAACGAACAACATCAAAATACCCACACTTCCGCCGCCCCC
GCCATTCCCTCCCCCTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MFRSSIMLLATMLCVSCVSHRPIQDSSSPPIDAANPLDGTPVALAWSSGTQLMMGVDTGAVQTSLLFSPAVESIGARLRG
RGAMRTANVPVSLKDDGEPISRKQDVVMADQAPYDGLLGWECIRKYVWNINYPKRSHRFFNKLPSRIKSWNKLSLIPGSD
YPQIADRHGRRIILDTGAPHAVYISKKRWNAIKQAYPDAFVSVYSGYSPAAGGFYAHECMHVSSFQLGPLELKNILLCES
FANPEVMGIPDDIDIILGYGALAARQFWLDGPGNALYFSSTSHRMPAPASFNLMGGTFIQDSNGNGPMKAYVAEWSPAWD
AGLRTGDVLISINGRKNPYPDLVEYVTTQRGAQASVVVQRRNRLVRIQWEVPAAPPAGDYYPTPQAITEQEFENHVRQQE
KKEQTQPSADGQQPPATAGETPDEASPAADGKTDKASAA

Sequences:

>Translated_439_residues
MFRSSIMLLATMLCVSCVSHRPIQDSSSPPIDAANPLDGTPVALAWSSGTQLMMGVDTGAVQTSLLFSPAVESIGARLRG
RGAMRTANVPVSLKDDGEPISRKQDVVMADQAPYDGLLGWECIRKYVWNINYPKRSHRFFNKLPSRIKSWNKLSLIPGSD
YPQIADRHGRRIILDTGAPHAVYISKKRWNAIKQAYPDAFVSVYSGYSPAAGGFYAHECMHVSSFQLGPLELKNILLCES
FANPEVMGIPDDIDIILGYGALAARQFWLDGPGNALYFSSTSHRMPAPASFNLMGGTFIQDSNGNGPMKAYVAEWSPAWD
AGLRTGDVLISINGRKNPYPDLVEYVTTQRGAQASVVVQRRNRLVRIQWEVPAAPPAGDYYPTPQAITEQEFENHVRQQE
KKEQTQPSADGQQPPATAGETPDEASPAADGKTDKASAA
>Mature_439_residues
MFRSSIMLLATMLCVSCVSHRPIQDSSSPPIDAANPLDGTPVALAWSSGTQLMMGVDTGAVQTSLLFSPAVESIGARLRG
RGAMRTANVPVSLKDDGEPISRKQDVVMADQAPYDGLLGWECIRKYVWNINYPKRSHRFFNKLPSRIKSWNKLSLIPGSD
YPQIADRHGRRIILDTGAPHAVYISKKRWNAIKQAYPDAFVSVYSGYSPAAGGFYAHECMHVSSFQLGPLELKNILLCES
FANPEVMGIPDDIDIILGYGALAARQFWLDGPGNALYFSSTSHRMPAPASFNLMGGTFIQDSNGNGPMKAYVAEWSPAWD
AGLRTGDVLISINGRKNPYPDLVEYVTTQRGAQASVVVQRRNRLVRIQWEVPAAPPAGDYYPTPQAITEQEFENHVRQQE
KKEQTQPSADGQQPPATAGETPDEASPAADGKTDKASAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47942; Mature: 47942

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRSSIMLLATMLCVSCVSHRPIQDSSSPPIDAANPLDGTPVALAWSSGTQLMMGVDTGA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCH
VQTSLLFSPAVESIGARLRGRGAMRTANVPVSLKDDGEPISRKQDVVMADQAPYDGLLGW
HHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECCCCCCCCCCCCEEEECCCCCCCCHHH
ECIRKYVWNINYPKRSHRFFNKLPSRIKSWNKLSLIPGSDYPQIADRHGRRIILDTGAPH
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCEEEEECCCCC
AVYISKKRWNAIKQAYPDAFVSVYSGYSPAAGGFYAHECMHVSSFQLGPLELKNILLCES
EEEEEHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHEECCCCCCCCHHHHHEEEECC
FANPEVMGIPDDIDIILGYGALAARQFWLDGPGNALYFSSTSHRMPAPASFNLMGGTFIQ
CCCCCEEECCCCCEEEEECCHHHHHHEEECCCCCEEEECCCCCCCCCCCCEEECCCEEEE
DSNGNGPMKAYVAEWSPAWDAGLRTGDVLISINGRKNPYPDLVEYVTTQRGAQASVVVQR
CCCCCCCEEEEEECCCCCHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHEEEC
RNRLVRIQWEVPAAPPAGDYYPTPQAITEQEFENHVRQQEKKEQTQPSADGQQPPATAGE
CCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
TPDEASPAADGKTDKASAA
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFRSSIMLLATMLCVSCVSHRPIQDSSSPPIDAANPLDGTPVALAWSSGTQLMMGVDTGA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCH
VQTSLLFSPAVESIGARLRGRGAMRTANVPVSLKDDGEPISRKQDVVMADQAPYDGLLGW
HHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECCCCCCCCCCCCEEEECCCCCCCCHHH
ECIRKYVWNINYPKRSHRFFNKLPSRIKSWNKLSLIPGSDYPQIADRHGRRIILDTGAPH
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCEEEEECCCCC
AVYISKKRWNAIKQAYPDAFVSVYSGYSPAAGGFYAHECMHVSSFQLGPLELKNILLCES
EEEEEHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHEECCCCCCCCHHHHHEEEECC
FANPEVMGIPDDIDIILGYGALAARQFWLDGPGNALYFSSTSHRMPAPASFNLMGGTFIQ
CCCCCEEECCCCCEEEEECCHHHHHHEEECCCCCEEEECCCCCCCCCCCCEEECCCEEEE
DSNGNGPMKAYVAEWSPAWDAGLRTGDVLISINGRKNPYPDLVEYVTTQRGAQASVVVQR
CCCCCCCEEEEEECCCCCHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHEEEC
RNRLVRIQWEVPAAPPAGDYYPTPQAITEQEFENHVRQQEKKEQTQPSADGQQPPATAGE
CCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
TPDEASPAADGKTDKASAA
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA