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The map label for this gene is yocK [H]

Identifier: 187734610

GI number: 187734610

Start: 122133

End: 122756

Strand: Reverse

Name: yocK [H]

Synonym: Amuc_0096

Alternate gene names: 187734610

Gene position: 122756-122133 (Counterclockwise)

Preceding gene: 187734620

Following gene: 187734609

Centisome position: 4.61

GC content: 57.53

Gene sequence:

>624_bases
ATGGAAAAGAAGCCTGCGCCGAAAACGGCCGGAAAGGCTCCGGTTAAAAAAGCTGCTCCTGCTCCCGTTGCCCCGGTTCC
CGCTCCCGCGAAAAATGAATTGACGGATGAACAGGCGGAAGCCATTGCCGCCGCCAGGGCGGAACTGGCCGCCAACCCCG
AATGGGAGCCTTTTGTGCAGATGCAGCGCCAGCATCTGCTGGACTTGCGCGACAGGGCTCTGGACAACATGAGCGGCGTG
GCTCGCGATACTCTCCGGAATCATCCGGAAGGCAGTGAGGCTTCCGGCTCCGGGGAACACCAGGCGGATGCCGGCAGTGA
CGCCTATGACCGTGATTTTGCGCTCAGCCTGCTTTCCAAAGAGCAGGACGGCCTGTATGAAATCGAACAGGCGCTCGCCC
GCATTGACAACGGAACATATGGCATCTGCGAAATGTCATACAAGGTCATTCCCATTCTGCGTCTGGAGGCCATCCCCTTT
GCTCGGCTTACCGTGGAATGCCAGGCCCAGTGGGAAAAGGAAAAAGGCCAGAATGCCAGGTTCCGTCCCAGAGTGGCCCT
GGGCTTTGCCGGAGGACAAAATGATGTAGATTTATCTGTTTCTCTTGACGATGACGAAGAATAG

Upstream 100 bases:

>100_bases
CCTGGAGGCTCCCGCTAAGAAGAAATGCTGCAGGAAAAAGGCGGCTGAACCGGAAAAAGCCGCCAAGCCCGCCAAAAAGG
CTGCCGCCGCCGCGGCTGAA

Downstream 100 bases:

>100_bases
TGTATAAATCCTCCCCCGTAACACATTTTCATCATGCCAAGAGACATCATCATCCTCGAATGCACCGAGGCCAAAGCCGA
AGGAAAGCCTACGTCCCGCT

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: GSP16O [H]

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MEKKPAPKTAGKAPVKKAAPAPVAPVPAPAKNELTDEQAEAIAAARAELAANPEWEPFVQMQRQHLLDLRDRALDNMSGV
ARDTLRNHPEGSEASGSGEHQADAGSDAYDRDFALSLLSKEQDGLYEIEQALARIDNGTYGICEMSYKVIPILRLEAIPF
ARLTVECQAQWEKEKGQNARFRPRVALGFAGGQNDVDLSVSLDDDEE

Sequences:

>Translated_207_residues
MEKKPAPKTAGKAPVKKAAPAPVAPVPAPAKNELTDEQAEAIAAARAELAANPEWEPFVQMQRQHLLDLRDRALDNMSGV
ARDTLRNHPEGSEASGSGEHQADAGSDAYDRDFALSLLSKEQDGLYEIEQALARIDNGTYGICEMSYKVIPILRLEAIPF
ARLTVECQAQWEKEKGQNARFRPRVALGFAGGQNDVDLSVSLDDDEE
>Mature_207_residues
MEKKPAPKTAGKAPVKKAAPAPVAPVPAPAKNELTDEQAEAIAAARAELAANPEWEPFVQMQRQHLLDLRDRALDNMSGV
ARDTLRNHPEGSEASGSGEHQADAGSDAYDRDFALSLLSKEQDGLYEIEQALARIDNGTYGICEMSYKVIPILRLEAIPF
ARLTVECQAQWEKEKGQNARFRPRVALGFAGGQNDVDLSVSLDDDEE

Specific function: Unknown

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 22566; Mature: 22566

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKPAPKTAGKAPVKKAAPAPVAPVPAPAKNELTDEQAEAIAAARAELAANPEWEPFVQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH
MQRQHLLDLRDRALDNMSGVARDTLRNHPEGSEASGSGEHQADAGSDAYDRDFALSLLSK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC
EQDGLYEIEQALARIDNGTYGICEMSYKVIPILRLEAIPFARLTVECQAQWEKEKGQNAR
CCCCHHHHHHHHHHHCCCCEEEEECCEEEEEEEEECCCCCEEEEEHHHHHHHHHCCCCCC
FRPRVALGFAGGQNDVDLSVSLDDDEE
CCCEEEEEECCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MEKKPAPKTAGKAPVKKAAPAPVAPVPAPAKNELTDEQAEAIAAARAELAANPEWEPFVQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH
MQRQHLLDLRDRALDNMSGVARDTLRNHPEGSEASGSGEHQADAGSDAYDRDFALSLLSK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC
EQDGLYEIEQALARIDNGTYGICEMSYKVIPILRLEAIPFARLTVECQAQWEKEKGQNAR
CCCCHHHHHHHHHHHCCCCEEEEECCEEEEEEEEECCCCCEEEEEHHHHHHHHHCCCCCC
FRPRVALGFAGGQNDVDLSVSLDDDEE
CCCEEEEEECCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]