Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is rpmG

Identifier: 187734609

GI number: 187734609

Start: 121926

End: 122099

Strand: Reverse

Name: rpmG

Synonym: Amuc_0095

Alternate gene names: 187734609

Gene position: 122099-121926 (Counterclockwise)

Preceding gene: 187734610

Following gene: 187734608

Centisome position: 4.58

GC content: 52.3

Gene sequence:

>174_bases
ATGCCAAGAGACATCATCATCCTCGAATGCACCGAGGCCAAAGCCGAAGGAAAGCCTACGTCCCGCTACGTCACCACGCG
CAATAAAAAAAGCCTGCGTACTCCCGGCCGCCTGGAAAAGATTAAGTACAATCCTTTCCTGAAGCGCCGCACGCTTCATC
GTGAAATGCGTTAA

Upstream 100 bases:

>100_bases
CCTGGGCTTTGCCGGAGGACAAAATGATGTAGATTTATCTGTTTCTCTTGACGATGACGAAGAATAGTGTATAAATCCTC
CCCCGTAACACATTTTCATC

Downstream 100 bases:

>100_bases
CTGGTTCGGCTTATCGATTATCTTTATTATTATGTCCACTGAACCCAAGACTGTAGAACGCCGTATTCGTTTCCGCACGT
GCAATCGCCAGATGCCGCGC

Product: 50S ribosomal protein L33

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 56

Protein sequence:

>57_residues
MPRDIIILECTEAKAEGKPTSRYVTTRNKKSLRTPGRLEKIKYNPFLKRRTLHREMR

Sequences:

>Translated_57_residues
MPRDIIILECTEAKAEGKPTSRYVTTRNKKSLRTPGRLEKIKYNPFLKRRTLHREMR
>Mature_56_residues
PRDIIILECTEAKAEGKPTSRYVTTRNKKSLRTPGRLEKIKYNPFLKRRTLHREMR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L33P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL33_AKKM8 (B2ULP6)

Other databases:

- EMBL:   CP001071
- RefSeq:   YP_001876721.1
- ProteinModelPortal:   B2ULP6
- SMR:   B2ULP6
- GeneID:   6274979
- GenomeReviews:   CP001071_GR
- KEGG:   amu:Amuc_0095
- HOGENOM:   HBG751058
- OMA:   ECTEAKA
- ProtClustDB:   PRK00595
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00294
- InterPro:   IPR001705
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01023

Pfam domain/function: PF00471 Ribosomal_L33; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 6829; Mature: 6698

Theoretical pI: Translated: 11.36; Mature: 11.36

Prosite motif: PS00582 RIBOSOMAL_L33

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRDIIILECTEAKAEGKPTSRYVTTRNKKSLRTPGRLEKIKYNPFLKRRTLHREMR
CCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHCCC
>Mature Secondary Structure 
PRDIIILECTEAKAEGKPTSRYVTTRNKKSLRTPGRLEKIKYNPFLKRRTLHREMR
CCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA