| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is rpmG
Identifier: 187734609
GI number: 187734609
Start: 121926
End: 122099
Strand: Reverse
Name: rpmG
Synonym: Amuc_0095
Alternate gene names: 187734609
Gene position: 122099-121926 (Counterclockwise)
Preceding gene: 187734610
Following gene: 187734608
Centisome position: 4.58
GC content: 52.3
Gene sequence:
>174_bases ATGCCAAGAGACATCATCATCCTCGAATGCACCGAGGCCAAAGCCGAAGGAAAGCCTACGTCCCGCTACGTCACCACGCG CAATAAAAAAAGCCTGCGTACTCCCGGCCGCCTGGAAAAGATTAAGTACAATCCTTTCCTGAAGCGCCGCACGCTTCATC GTGAAATGCGTTAA
Upstream 100 bases:
>100_bases CCTGGGCTTTGCCGGAGGACAAAATGATGTAGATTTATCTGTTTCTCTTGACGATGACGAAGAATAGTGTATAAATCCTC CCCCGTAACACATTTTCATC
Downstream 100 bases:
>100_bases CTGGTTCGGCTTATCGATTATCTTTATTATTATGTCCACTGAACCCAAGACTGTAGAACGCCGTATTCGTTTCCGCACGT GCAATCGCCAGATGCCGCGC
Product: 50S ribosomal protein L33
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 57; Mature: 56
Protein sequence:
>57_residues MPRDIIILECTEAKAEGKPTSRYVTTRNKKSLRTPGRLEKIKYNPFLKRRTLHREMR
Sequences:
>Translated_57_residues MPRDIIILECTEAKAEGKPTSRYVTTRNKKSLRTPGRLEKIKYNPFLKRRTLHREMR >Mature_56_residues PRDIIILECTEAKAEGKPTSRYVTTRNKKSLRTPGRLEKIKYNPFLKRRTLHREMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L33P family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RL33_AKKM8 (B2ULP6)
Other databases:
- EMBL: CP001071 - RefSeq: YP_001876721.1 - ProteinModelPortal: B2ULP6 - SMR: B2ULP6 - GeneID: 6274979 - GenomeReviews: CP001071_GR - KEGG: amu:Amuc_0095 - HOGENOM: HBG751058 - OMA: ECTEAKA - ProtClustDB: PRK00595 - GO: GO:0005840 - GO: GO:0006412 - HAMAP: MF_00294 - InterPro: IPR001705 - InterPro: IPR011332 - TIGRFAMs: TIGR01023
Pfam domain/function: PF00471 Ribosomal_L33; SSF57829 Ribosomal_zn-bd
EC number: NA
Molecular weight: Translated: 6829; Mature: 6698
Theoretical pI: Translated: 11.36; Mature: 11.36
Prosite motif: PS00582 RIBOSOMAL_L33
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRDIIILECTEAKAEGKPTSRYVTTRNKKSLRTPGRLEKIKYNPFLKRRTLHREMR CCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHCCC >Mature Secondary Structure PRDIIILECTEAKAEGKPTSRYVTTRNKKSLRTPGRLEKIKYNPFLKRRTLHREMR CCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA