| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734595
Identifier: 187734595
GI number: 187734595
Start: 107958
End: 108536
Strand: Direct
Name: 187734595
Synonym: Amuc_0081
Alternate gene names: NA
Gene position: 107958-108536 (Clockwise)
Preceding gene: 187734594
Following gene: 187734599
Centisome position: 4.05
GC content: 53.89
Gene sequence:
>579_bases ATGAATGCCTCTGTTTTCCTGCGGCGCATGCTCCCTATGCTGGCCGCGTTCCTGATGGCCTCCTGCGGTGATCCTACCGT CTCCTACTGGAAAGAGGTGGCGGACATCAATACGGAATACTCGGAAAAAAGCGACGCACTGGTGCAACACCTCCTGAAAC TGAAAAAGAACCCTACCCTTCCGGGCCTGGAAGAAAGCAGCAGGGATGCGGCTGACCTGTTGCGGGAAAGGGATGAAGAA CTGGCGGACCTGAGCACGAAAAACGTGGATCCCGCCGTGACGGCCTATGTGGAAGAAGACCGCAAGCTTTTTGCCAGAGG AAGGGAATTGGCGGAACGCTACCAGCAATACTTTGAAAAATATCTTAAGGGAGGACCGGATTTTACTCCGGATCCTTCCC GGGCCGTCGCCCATATAGGCCGGGGCCGGCAGGAAATACGCAAAATTCTGGCAGAAGCCCGAAAACTGGAAGCTCGGGCT GAAATGCTGAGAAAAGAAAAATCAGCTGAGCTTGAGCAAGAACTTCCTCCGCTGCACTTTCGCCTTCCGGAGTTGAAACA ACTTCTATCCAGCCGTTAG
Upstream 100 bases:
>100_bases ATTGAAATCAATTAAGCTTCACCGCTTTTCAACGTGAAACAGCAACAGGGGAAACGGAAAACACCCTTGATTCCCGCTTG GGGCATGCTACAAAAGATAA
Downstream 100 bases:
>100_bases AAAACGCGCACGAACCACTTGCATCAATGCGGAGTCTCGGCCAGTCTGACAGCGTCCTTTCCTTTGCACGGGCGGACACA ACCGGTTCCTGAAACTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MNASVFLRRMLPMLAAFLMASCGDPTVSYWKEVADINTEYSEKSDALVQHLLKLKKNPTLPGLEESSRDAADLLRERDEE LADLSTKNVDPAVTAYVEEDRKLFARGRELAERYQQYFEKYLKGGPDFTPDPSRAVAHIGRGRQEIRKILAEARKLEARA EMLRKEKSAELEQELPPLHFRLPELKQLLSSR
Sequences:
>Translated_192_residues MNASVFLRRMLPMLAAFLMASCGDPTVSYWKEVADINTEYSEKSDALVQHLLKLKKNPTLPGLEESSRDAADLLRERDEE LADLSTKNVDPAVTAYVEEDRKLFARGRELAERYQQYFEKYLKGGPDFTPDPSRAVAHIGRGRQEIRKILAEARKLEARA EMLRKEKSAELEQELPPLHFRLPELKQLLSSR >Mature_192_residues MNASVFLRRMLPMLAAFLMASCGDPTVSYWKEVADINTEYSEKSDALVQHLLKLKKNPTLPGLEESSRDAADLLRERDEE LADLSTKNVDPAVTAYVEEDRKLFARGRELAERYQQYFEKYLKGGPDFTPDPSRAVAHIGRGRQEIRKILAEARKLEARA EMLRKEKSAELEQELPPLHFRLPELKQLLSSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22016; Mature: 22016
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASVFLRRMLPMLAAFLMASCGDPTVSYWKEVADINTEYSEKSDALVQHLLKLKKNPTL CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHCCCCC PGLEESSRDAADLLRERDEELADLSTKNVDPAVTAYVEEDRKLFARGRELAERYQQYFEK CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLKGGPDFTPDPSRAVAHIGRGRQEIRKILAEARKLEARAEMLRKEKSAELEQELPPLHF HHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RLPELKQLLSSR CCHHHHHHHHCC >Mature Secondary Structure MNASVFLRRMLPMLAAFLMASCGDPTVSYWKEVADINTEYSEKSDALVQHLLKLKKNPTL CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHCCCCC PGLEESSRDAADLLRERDEELADLSTKNVDPAVTAYVEEDRKLFARGRELAERYQQYFEK CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLKGGPDFTPDPSRAVAHIGRGRQEIRKILAEARKLEARAEMLRKEKSAELEQELPPLHF HHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RLPELKQLLSSR CCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA