| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is yeeZ [C]
Identifier: 187734583
GI number: 187734583
Start: 91847
End: 92701
Strand: Direct
Name: yeeZ [C]
Synonym: Amuc_0069
Alternate gene names: 187734583
Gene position: 91847-92701 (Clockwise)
Preceding gene: 187734582
Following gene: 187734584
Centisome position: 3.45
GC content: 60.82
Gene sequence:
>855_bases ATGACCGGCCTTCTGTGTAAGAATCCCCGCATCGTTCTCATTCTGGGAACAGGGTATCTGGGAAAAGCCCTGGCGGAAAG CCTGCGGAAAGCGGGACATACGGCCCTGACGGCGGATATTGACCCGCAAAAAGCCATTTACGAAGCAGACGTTGCAGACC AGGCCTCCATGCAGGGGCTGGCCGCCCGCATCCCCTCCCCCCAGATCATCGTCATGTGCGCCAGCACGAGGGGAGGCGGA GAGGAAGCCTACCGCAACCTTTACGCTCATGGAACGCGGAACACGCTGGAAGCCTTTTCCGGAACGCCGGTCATCTTCTG TTCCAGCACAGCCGTCTATGGAATCACGGACGGACGCTGGATTACGGAGGAACACAACGTTTATCCCTCCTCTGGAAAAA ACGGGCTGCTTATTCAGGCGGAACAGGCGGTTTTGGCAGCGGGGGGCACGGTCGTCCGGCTGGGAGCCCTGTACGGGCCG GGCCGCTGTGTTCTCGTCTCCCAGTACGTCACGAAGGGGAAGGCCCTCCCCGGAGCCATGAACAGATGGCTCAATTACAT CCACCGGGATGATGCCGCAGCCGCCCTGCACCTGCTCTGCACCCTGCGGGAACCGCCTGCCGGCATTTACAACCTGACGG ACCGCACCCCCATGCAAATGGGAGAAATATACTCCTACCTTTCCAATTTGCTGGGGAAACCCGCTCCGCAGCCTGAACCG CTCCCGGCGGAAGCGCGCCGGGGCTTCTCCAACCAGAGGATTTCCTGCTCCCGCCTTCTGGCCCTAGGCTGGGAACCGCT CTACCCAAGCTTTGCGGACGGTGTGCACAATGTGCTGGAGGCACTGGAAGAGTAA
Upstream 100 bases:
>100_bases GCCTGGTGCATAATCATGAGCCCAATCCCAAAATCACATGGCCGGAAGATATTTCCCGCGCTGAAATGCTAATGGAACTC AAGCACCTCCGCAATGACTC
Downstream 100 bases:
>100_bases ATTTCACACCCATCCTTTTCCTCGCTGACCGGCCCTTTCCGGACATTCCATAAACAAGAAGAGGCACCCCTGCTGAACGC ATCTCGTGAGGCAGGCACAT
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family; ActC Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; Sugar Epimerase/Dehydratase-Like Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Epimerase/Dehydratase-Related Protein; Ketopantoate Reductase ApbA/PanE Domain Protein; NAD Dependent Epimerase/Dehydratase-Related Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NADP Oxidoreductase Co
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTGLLCKNPRIVLILGTGYLGKALAESLRKAGHTALTADIDPQKAIYEADVADQASMQGLAARIPSPQIIVMCASTRGGG EEAYRNLYAHGTRNTLEAFSGTPVIFCSSTAVYGITDGRWITEEHNVYPSSGKNGLLIQAEQAVLAAGGTVVRLGALYGP GRCVLVSQYVTKGKALPGAMNRWLNYIHRDDAAAALHLLCTLREPPAGIYNLTDRTPMQMGEIYSYLSNLLGKPAPQPEP LPAEARRGFSNQRISCSRLLALGWEPLYPSFADGVHNVLEALEE
Sequences:
>Translated_284_residues MTGLLCKNPRIVLILGTGYLGKALAESLRKAGHTALTADIDPQKAIYEADVADQASMQGLAARIPSPQIIVMCASTRGGG EEAYRNLYAHGTRNTLEAFSGTPVIFCSSTAVYGITDGRWITEEHNVYPSSGKNGLLIQAEQAVLAAGGTVVRLGALYGP GRCVLVSQYVTKGKALPGAMNRWLNYIHRDDAAAALHLLCTLREPPAGIYNLTDRTPMQMGEIYSYLSNLLGKPAPQPEP LPAEARRGFSNQRISCSRLLALGWEPLYPSFADGVHNVLEALEE >Mature_283_residues TGLLCKNPRIVLILGTGYLGKALAESLRKAGHTALTADIDPQKAIYEADVADQASMQGLAARIPSPQIIVMCASTRGGGE EAYRNLYAHGTRNTLEAFSGTPVIFCSSTAVYGITDGRWITEEHNVYPSSGKNGLLIQAEQAVLAAGGTVVRLGALYGPG RCVLVSQYVTKGKALPGAMNRWLNYIHRDDAAAALHLLCTLREPPAGIYNLTDRTPMQMGEIYSYLSNLLGKPAPQPEPL PAEARRGFSNQRISCSRLLALGWEPLYPSFADGVHNVLEALEE
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30540; Mature: 30409
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLLCKNPRIVLILGTGYLGKALAESLRKAGHTALTADIDPQKAIYEADVADQASMQGL CCCCEECCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCHHHHHHHHH AARIPSPQIIVMCASTRGGGEEAYRNLYAHGTRNTLEAFSGTPVIFCSSTAVYGITDGRW HHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEECCCEEEECCCCEE ITEEHNVYPSSGKNGLLIQAEQAVLAAGGTVVRLGALYGPGRCVLVSQYVTKGKALPGAM ECCCCCCCCCCCCCCEEEEECCHHHHCCCCEEEEECEECCCEEEEEEHHHHCCCCCCHHH NRWLNYIHRDDAAAALHLLCTLREPPAGIYNLTDRTPMQMGEIYSYLSNLLGKPAPQPEP HHHHHHHHCCHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCC LPAEARRGFSNQRISCSRLLALGWEPLYPSFADGVHNVLEALEE CCHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TGLLCKNPRIVLILGTGYLGKALAESLRKAGHTALTADIDPQKAIYEADVADQASMQGL CCCEECCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCHHHHHHHHH AARIPSPQIIVMCASTRGGGEEAYRNLYAHGTRNTLEAFSGTPVIFCSSTAVYGITDGRW HHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEECCCEEEECCCCEE ITEEHNVYPSSGKNGLLIQAEQAVLAAGGTVVRLGALYGPGRCVLVSQYVTKGKALPGAM ECCCCCCCCCCCCCCEEEEECCHHHHCCCCEEEEECEECCCEEEEEEHHHHCCCCCCHHH NRWLNYIHRDDAAAALHLLCTLREPPAGIYNLTDRTPMQMGEIYSYLSNLLGKPAPQPEP HHHHHHHHCCHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCC LPAEARRGFSNQRISCSRLLALGWEPLYPSFADGVHNVLEALEE CCHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA