| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is yqeY [H]
Identifier: 187734581
GI number: 187734581
Start: 90682
End: 91158
Strand: Direct
Name: yqeY [H]
Synonym: Amuc_0067
Alternate gene names: 187734581
Gene position: 90682-91158 (Clockwise)
Preceding gene: 187734580
Following gene: 187734582
Centisome position: 3.4
GC content: 55.35
Gene sequence:
>477_bases ATGCGCTTAGTTAATGGAGATATGAACACGATTTCCGACCAAATCATGGAGGGGATGAAAACCGCCATGAAAGCAAAAGA CTCCGTTACCCTCAATACCCTGCGCGCCCTCAAGACGGCTCTCACGAACACGGCCATCGCCAAGGGAGGCTTGGGAACCC GGCTGGAAGAAGCGGAAGAACTGGCCGTGGTCCGCAAGCAAATCAAGCAGCGTGAGGATTCTGCGGAACAATTCCGCGCC GCCGGACGCCCGGAACTGGCGGAAAAGGAAGAGGCAGAAATCACCGTTCTCAAGCAATTCATGCCCGCAGAGCTTACAGC AGAAGAAACGGCGGCCATTCTGGAAACCGTGATGAAGGAAACGGGAGCCTCTGCCAAAAAAGATATGGGGCAGGTCATGA AACTCATGCAGGAACGCACTGCCGGCAGAGTCAACGGCAAGGAGTTGGCCCGCATGGTGTCAGCCAGACTGTCATGA
Upstream 100 bases:
>100_bases AAACACGGCTGTTCCGTTTTTATTCCCCTTATCCGGGCCGCCGGCGGCATTCCCCGCGCTGGCGGCCTTTTTCAATTTAC GGCTTGAAGTACACCTGGGG
Downstream 100 bases:
>100_bases AATGCTGCGCCGCCATCATCGTTGCGGCCGGGTCCTCCCGGCGTGCCGGATTTGACAAGCTGCTGGCCCCCCTGCACGGC GTCAGGGTGCTGGAACGCAG
Product: GatB/YqeY domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MRLVNGDMNTISDQIMEGMKTAMKAKDSVTLNTLRALKTALTNTAIAKGGLGTRLEEAEELAVVRKQIKQREDSAEQFRA AGRPELAEKEEAEITVLKQFMPAELTAEETAAILETVMKETGASAKKDMGQVMKLMQERTAGRVNGKELARMVSARLS
Sequences:
>Translated_158_residues MRLVNGDMNTISDQIMEGMKTAMKAKDSVTLNTLRALKTALTNTAIAKGGLGTRLEEAEELAVVRKQIKQREDSAEQFRA AGRPELAEKEEAEITVLKQFMPAELTAEETAAILETVMKETGASAKKDMGQVMKLMQERTAGRVNGKELARMVSARLS >Mature_158_residues MRLVNGDMNTISDQIMEGMKTAMKAKDSVTLNTLRALKTALTNTAIAKGGLGTRLEEAEELAVVRKQIKQREDSAEQFRA AGRPELAEKEEAEITVLKQFMPAELTAEETAAILETVMKETGASAKKDMGQVMKLMQERTAGRVNGKELARMVSARLS
Specific function: Unknown
COG id: COG1610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003789 - InterPro: IPR023168 - InterPro: IPR019004 [H]
Pfam domain/function: PF09424 YqeY [H]
EC number: NA
Molecular weight: Translated: 17299; Mature: 17299
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLVNGDMNTISDQIMEGMKTAMKAKDSVTLNTLRALKTALTNTAIAKGGLGTRLEEAEE CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LAVVRKQIKQREDSAEQFRAAGRPELAEKEEAEITVLKQFMPAELTAEETAAILETVMKE HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH TGASAKKDMGQVMKLMQERTAGRVNGKELARMVSARLS HCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MRLVNGDMNTISDQIMEGMKTAMKAKDSVTLNTLRALKTALTNTAIAKGGLGTRLEEAEE CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LAVVRKQIKQREDSAEQFRAAGRPELAEKEEAEITVLKQFMPAELTAEETAAILETVMKE HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH TGASAKKDMGQVMKLMQERTAGRVNGKELARMVSARLS HCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9023197 [H]