| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734580
Identifier: 187734580
GI number: 187734580
Start: 89669
End: 90583
Strand: Direct
Name: 187734580
Synonym: Amuc_0066
Alternate gene names: NA
Gene position: 89669-90583 (Clockwise)
Preceding gene: 187734579
Following gene: 187734581
Centisome position: 3.37
GC content: 54.32
Gene sequence:
>915_bases ATGAAAGCGACATTACTCCTTCTTTGCCTGGCGTGCAGCGCGCTGGCCGCGCCGCCGACAAAAAAACAGCCGGCCCCCGT TGAACCGCTGCCCGCCCTGGAAAAAAACACCATTGCCATTGACGGCCATCCGGAAAGCGTTGCAGCGGATGCCGAGGGCA ATATCTATTTCACCTGCATCGGCTCCAGGCTCACGCCTACGGAAAAAGACAAGGACGGCTACCTGGGCGTCATTCCGCAC GGTTCCACAGAGCCGAAAAAAATCACGGACGTAGATACCCTGGACGCGCCGAAAGGGTTGCTGTATCAGGACGGCTTCCT TTACTGCACGGACGTGGACATGGTATTCAAAATAAACGCCAAGACCGGCGCTATTGAAGGATACGTGGACTTGTCCCCAT CCCGCATGAAATTCCTCAATGACCTGGCGTTCATCAATGGCAGGCTCATGGTTTCCTCCACGGATACCAACCAGATCTTC TATGTGGACACGAATACCAGCTCTTATGGGGAACTGGTCACCAAACAACCCATCTACAAACCGAACGGCCTGGCCTGGGA CCCGGAAAGAAAGGTCATTTACCTCTGCGAATACGCAACGGATGAAAAAGGCAAACCCAGCGGACGCCTGCTCTCCATTA ACCCCGTTTCCCGGGAAGTTACGGAACTTTCCAAGGAACGGGGACAGTATGACGGACTGGTTTACCGTGACAACGCCCTT TACTACAGCGACTGGTCCAAGGATAAAAAACCGGAAGCTGTCCGCAGGCTGGATTTGAAGACGGGGCGTTCCGCCCCGGT AGCCACTGGCCCTGTTGAAGGGGCGGCGGACTTTATCCTGTATGACTCCATGATGGTGGTTCCGGGCATGACGGAAAAGA AAATCCACATCATGCCCATTGGCGGAAAAAAATAA
Upstream 100 bases:
>100_bases CCGAACGGGGCGCAACTCCGCCCATCAGCCTGCCAGCCTCTGCGGGGCTTGCTTTTCCATTGCTCCCATGCCATAAGGTT CAAAACTCTTACACCACCCC
Downstream 100 bases:
>100_bases ACACGGCTGTTCCGTTTTTATTCCCCTTATCCGGGCCGCCGGCGGCATTCCCCGCGCTGGCGGCCTTTTTCAATTTACGG CTTGAAGTACACCTGGGGAT
Product: ATP/GTP-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MKATLLLLCLACSALAAPPTKKQPAPVEPLPALEKNTIAIDGHPESVAADAEGNIYFTCIGSRLTPTEKDKDGYLGVIPH GSTEPKKITDVDTLDAPKGLLYQDGFLYCTDVDMVFKINAKTGAIEGYVDLSPSRMKFLNDLAFINGRLMVSSTDTNQIF YVDTNTSSYGELVTKQPIYKPNGLAWDPERKVIYLCEYATDEKGKPSGRLLSINPVSREVTELSKERGQYDGLVYRDNAL YYSDWSKDKKPEAVRRLDLKTGRSAPVATGPVEGAADFILYDSMMVVPGMTEKKIHIMPIGGKK
Sequences:
>Translated_304_residues MKATLLLLCLACSALAAPPTKKQPAPVEPLPALEKNTIAIDGHPESVAADAEGNIYFTCIGSRLTPTEKDKDGYLGVIPH GSTEPKKITDVDTLDAPKGLLYQDGFLYCTDVDMVFKINAKTGAIEGYVDLSPSRMKFLNDLAFINGRLMVSSTDTNQIF YVDTNTSSYGELVTKQPIYKPNGLAWDPERKVIYLCEYATDEKGKPSGRLLSINPVSREVTELSKERGQYDGLVYRDNAL YYSDWSKDKKPEAVRRLDLKTGRSAPVATGPVEGAADFILYDSMMVVPGMTEKKIHIMPIGGKK >Mature_304_residues MKATLLLLCLACSALAAPPTKKQPAPVEPLPALEKNTIAIDGHPESVAADAEGNIYFTCIGSRLTPTEKDKDGYLGVIPH GSTEPKKITDVDTLDAPKGLLYQDGFLYCTDVDMVFKINAKTGAIEGYVDLSPSRMKFLNDLAFINGRLMVSSTDTNQIF YVDTNTSSYGELVTKQPIYKPNGLAWDPERKVIYLCEYATDEKGKPSGRLLSINPVSREVTELSKERGQYDGLVYRDNAL YYSDWSKDKKPEAVRRLDLKTGRSAPVATGPVEGAADFILYDSMMVVPGMTEKKIHIMPIGGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33383; Mature: 33383
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKATLLLLCLACSALAAPPTKKQPAPVEPLPALEKNTIAIDGHPESVAADAEGNIYFTCI CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCEEEEEE GSRLTPTEKDKDGYLGVIPHGSTEPKKITDVDTLDAPKGLLYQDGFLYCTDVDMVFKINA CCCCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCCEEECCEEEEECCEEEEEEEC KTGAIEGYVDLSPSRMKFLNDLAFINGRLMVSSTDTNQIFYVDTNTSSYGELVTKQPIYK CCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCHHHHHHCCCCCC PNGLAWDPERKVIYLCEYATDEKGKPSGRLLSINPVSREVTELSKERGQYDGLVYRDNAL CCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEECCEE YYSDWSKDKKPEAVRRLDLKTGRSAPVATGPVEGAADFILYDSMMVVPGMTEKKIHIMPI EECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCEEECCCCCCCEEEEEEC GGKK CCCC >Mature Secondary Structure MKATLLLLCLACSALAAPPTKKQPAPVEPLPALEKNTIAIDGHPESVAADAEGNIYFTCI CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCEEEEEE GSRLTPTEKDKDGYLGVIPHGSTEPKKITDVDTLDAPKGLLYQDGFLYCTDVDMVFKINA CCCCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCCEEECCEEEEECCEEEEEEEC KTGAIEGYVDLSPSRMKFLNDLAFINGRLMVSSTDTNQIFYVDTNTSSYGELVTKQPIYK CCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCHHHHHHCCCCCC PNGLAWDPERKVIYLCEYATDEKGKPSGRLLSINPVSREVTELSKERGQYDGLVYRDNAL CCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEECCEE YYSDWSKDKKPEAVRRLDLKTGRSAPVATGPVEGAADFILYDSMMVVPGMTEKKIHIMPI EECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCEEECCCCCCCEEEEEEC GGKK CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA