| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734548
Identifier: 187734548
GI number: 187734548
Start: 40350
End: 41069
Strand: Reverse
Name: 187734548
Synonym: Amuc_0032
Alternate gene names: NA
Gene position: 41069-40350 (Counterclockwise)
Preceding gene: 187734551
Following gene: 187734547
Centisome position: 1.54
GC content: 60.28
Gene sequence:
>720_bases ATGAGGCTGTTTTCCATCATCCTGTGCTGTGCCGTGCAGGCCGTCCTGGGGTATGACGGGCCGCCGCCCCTGACGGAGGT GGACGGCCGTTCCCCCATCCGCATGGGCGGGGAGATGCTTGGCGGCTACCGTTCATACTATGTCCACCGGGGGGAAAAGA TGGGGGCTGATTCCACGGAGGGCCAGATTTCCGGCGGAGCCTCCCTGTCTGATTCCTGGGCGGTGAGCGGGGAACTTTTC GCTATCCGCAACTGGCAGGGCCGCCATTTCAGTCAGGCCACTTTACACGGGGAAGTCCAGTATTATCTGGCGGACGAATG CACGGCCGGGCTTTTTGTCAACGGGCAGTGGTACGATTCCTGTCCCCTGAAGAACGGGGCGGAGCCGGGCCTGTCCCTTA AATGGAATCCCACCCCTTCCTGGTCTTTCCGCGGTTCCTTCCTGTATGATTCCGGACAGGAGGGTGCATATTCCCAGTGG GGCGTTACCTGGCAGCCCCTGCTGTGCGAATCCGTCGCCATGGTGAATACGGTTTCCCTGGGTTTTGCCCACGATTATCT GGGAAGGAACGGCTTGAAAGAGCTGATGGTGCGCACGGGGGCGCTGTGGGCCGTTTCCGGCGGTCTGCGGGTGGAGCCTT TCCTGGGGTGGTATTGCGGCTACGGGCGGGACGATTTCAAAAAAGTAGTGCTGGGGCTTTGGTGCTCTTACGTTTTTTAA
Upstream 100 bases:
>100_bases CGAGAGGGTAAGGGCAGATTCCCGTTTTGCCAAGCCCGGAGAATGTGCATGCACCGTTTTGGCGTTGGAGCGGCGCAGCG AATTATGTTAAAAGTCTTTC
Downstream 100 bases:
>100_bases CGGGCGGATTTCTCCGGTTTTCCGGCATTTTCCTGTTGCCAAACGGGGAGGCTTGGTCATAATGGCCTGCGTATGATGAA GCCTACACTTCTTGTTTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MRLFSIILCCAVQAVLGYDGPPPLTEVDGRSPIRMGGEMLGGYRSYYVHRGEKMGADSTEGQISGGASLSDSWAVSGELF AIRNWQGRHFSQATLHGEVQYYLADECTAGLFVNGQWYDSCPLKNGAEPGLSLKWNPTPSWSFRGSFLYDSGQEGAYSQW GVTWQPLLCESVAMVNTVSLGFAHDYLGRNGLKELMVRTGALWAVSGGLRVEPFLGWYCGYGRDDFKKVVLGLWCSYVF
Sequences:
>Translated_239_residues MRLFSIILCCAVQAVLGYDGPPPLTEVDGRSPIRMGGEMLGGYRSYYVHRGEKMGADSTEGQISGGASLSDSWAVSGELF AIRNWQGRHFSQATLHGEVQYYLADECTAGLFVNGQWYDSCPLKNGAEPGLSLKWNPTPSWSFRGSFLYDSGQEGAYSQW GVTWQPLLCESVAMVNTVSLGFAHDYLGRNGLKELMVRTGALWAVSGGLRVEPFLGWYCGYGRDDFKKVVLGLWCSYVF >Mature_239_residues MRLFSIILCCAVQAVLGYDGPPPLTEVDGRSPIRMGGEMLGGYRSYYVHRGEKMGADSTEGQISGGASLSDSWAVSGELF AIRNWQGRHFSQATLHGEVQYYLADECTAGLFVNGQWYDSCPLKNGAEPGLSLKWNPTPSWSFRGSFLYDSGQEGAYSQW GVTWQPLLCESVAMVNTVSLGFAHDYLGRNGLKELMVRTGALWAVSGGLRVEPFLGWYCGYGRDDFKKVVLGLWCSYVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26350; Mature: 26350
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLFSIILCCAVQAVLGYDGPPPLTEVDGRSPIRMGGEMLGGYRSYYVHRGEKMGADSTE CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCHHHHCCHHHHEEECCCCCCCCCCC GQISGGASLSDSWAVSGELFAIRNWQGRHFSQATLHGEVQYYLADECTAGLFVNGQWYDS CCCCCCCCCCCCEEECCEEEEEECCCCCCCCCEEEECEEEEEEECCCCCCEEECCCCCCC CPLKNGAEPGLSLKWNPTPSWSFRGSFLYDSGQEGAYSQWGVTWQPLLCESVAMVNTVSL CCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCEECHHHHHHHHHHHHHHH GFAHDYLGRNGLKELMVRTGALWAVSGGLRVEPFLGWYCGYGRDDFKKVVLGLWCSYVF HHHHHHHCCCHHHHHHHHCCCEEEECCCCEECHHHHEECCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRLFSIILCCAVQAVLGYDGPPPLTEVDGRSPIRMGGEMLGGYRSYYVHRGEKMGADSTE CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCHHHHCCHHHHEEECCCCCCCCCCC GQISGGASLSDSWAVSGELFAIRNWQGRHFSQATLHGEVQYYLADECTAGLFVNGQWYDS CCCCCCCCCCCCEEECCEEEEEECCCCCCCCCEEEECEEEEEEECCCCCCEEECCCCCCC CPLKNGAEPGLSLKWNPTPSWSFRGSFLYDSGQEGAYSQWGVTWQPLLCESVAMVNTVSL CCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCEECHHHHHHHHHHHHHHH GFAHDYLGRNGLKELMVRTGALWAVSGGLRVEPFLGWYCGYGRDDFKKVVLGLWCSYVF HHHHHHHCCCHHHHHHHHCCCEEEECCCCEECHHHHEECCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA