| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187734547
Identifier: 187734547
GI number: 187734547
Start: 39366
End: 40241
Strand: Reverse
Name: 187734547
Synonym: Amuc_0031
Alternate gene names: NA
Gene position: 40241-39366 (Counterclockwise)
Preceding gene: 187734548
Following gene: 187734546
Centisome position: 1.51
GC content: 56.51
Gene sequence:
>876_bases ATGGGCAGCCGTTACGGCGGTCTCAAGCAACTTGACCCAATGGGCCCCAACGGGGAAGTAGTTCTTGACTACTCTGTTTA TGATGCCATCCGGGCCGGTTTCGGAAAAGTGGTATTCATTATCCGCCGTGACTTTGAAGATATTTTCAAGGAAAAGGTCG GCAGCCGTTTTGCCGGCAAGATTGAGGTGGATTACGCTTTCCAGTCCCTGGACGACCTGCCGGAAGGCTTCTCCGTGCCG GAAGGCCGGGAAAAGCCCTGGGGCACCGCCCACGCCCTGCGTGCCGCCCGCCACGTGGTGAAGGAACCCTTTGCCGTAGT GAATGCGGATGACTTTTACGGTGCGGACGCTTTTGTGCAGGCCGCCAAGTTTCTGACCTCCACTACGGATGAACCCGGCA AGGCCCATTACGGCATGATCGGCTATCCGCTGAAGAACACCCTCTCCGACAACGGGGACGTGAACCGCGGCATTTGCTCC ATCAAGGGCGGCCTTCTGGATGGCGTGGAGGAATTCGTGAAAATCCAGGCTGACGAAGACGGCGTAGTGCGCGGCAACAA CCTGAAGGGCGAACGCCTGCCGGTGGATCCTGCAGAACTGGTTTCCATGAATTTCTGGCTGTTCTCCCCCTCCTTCATCG AACTGACGGAGGATCATTTCATTGACTTCCTGAAAGAACACGGTCAGGAACCCAAGAGCGAATGCTTTATTCCCACCGTG GTGGACGCCCTGATTCATGCGGACCGGGCGGATTGCGCCGTTCTTCCCACTTCTTCCTCCTGGTTCGGCATGACCTATCC GGGGGACAAGCCCATGGTTGTGGAAGGCATCAACAAACTTATCCAGCAGGGCGTATACCCTGAAAAGCTCAACTAA
Upstream 100 bases:
>100_bases TTTCTCCGGTTTTCCGGCATTTTCCTGTTGCCAAACGGGGAGGCTTGGTCATAATGGCCTGCGTATGATGAAGCCTACAC TTCTTGTTTTAGCAGCTGGC
Downstream 100 bases:
>100_bases GCCTTTTTCCCTATGCACGATCTCAAGGCTGTATCAACCCTGTTCGATCTCCGCGGCGATTTTGTCCACGGTTATTCCTA CGGCAGCGGCCACATCAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MGSRYGGLKQLDPMGPNGEVVLDYSVYDAIRAGFGKVVFIIRRDFEDIFKEKVGSRFAGKIEVDYAFQSLDDLPEGFSVP EGREKPWGTAHALRAARHVVKEPFAVVNADDFYGADAFVQAAKFLTSTTDEPGKAHYGMIGYPLKNTLSDNGDVNRGICS IKGGLLDGVEEFVKIQADEDGVVRGNNLKGERLPVDPAELVSMNFWLFSPSFIELTEDHFIDFLKEHGQEPKSECFIPTV VDALIHADRADCAVLPTSSSWFGMTYPGDKPMVVEGINKLIQQGVYPEKLN
Sequences:
>Translated_291_residues MGSRYGGLKQLDPMGPNGEVVLDYSVYDAIRAGFGKVVFIIRRDFEDIFKEKVGSRFAGKIEVDYAFQSLDDLPEGFSVP EGREKPWGTAHALRAARHVVKEPFAVVNADDFYGADAFVQAAKFLTSTTDEPGKAHYGMIGYPLKNTLSDNGDVNRGICS IKGGLLDGVEEFVKIQADEDGVVRGNNLKGERLPVDPAELVSMNFWLFSPSFIELTEDHFIDFLKEHGQEPKSECFIPTV VDALIHADRADCAVLPTSSSWFGMTYPGDKPMVVEGINKLIQQGVYPEKLN >Mature_290_residues GSRYGGLKQLDPMGPNGEVVLDYSVYDAIRAGFGKVVFIIRRDFEDIFKEKVGSRFAGKIEVDYAFQSLDDLPEGFSVPE GREKPWGTAHALRAARHVVKEPFAVVNADDFYGADAFVQAAKFLTSTTDEPGKAHYGMIGYPLKNTLSDNGDVNRGICSI KGGLLDGVEEFVKIQADEDGVVRGNNLKGERLPVDPAELVSMNFWLFSPSFIELTEDHFIDFLKEHGQEPKSECFIPTVV DALIHADRADCAVLPTSSSWFGMTYPGDKPMVVEGINKLIQQGVYPEKLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32120; Mature: 31988
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSRYGGLKQLDPMGPNGEVVLDYSVYDAIRAGFGKVVFIIRRDFEDIFKEKVGSRFAGK CCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCE IEVDYAFQSLDDLPEGFSVPEGREKPWGTAHALRAARHVVKEPFAVVNADDFYGADAFVQ EEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCHHCCHHHHHH AAKFLTSTTDEPGKAHYGMIGYPLKNTLSDNGDVNRGICSIKGGLLDGVEEFVKIQADED HHHHHHCCCCCCCCCCCCEEECCHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHEECCCCC GVVRGNNLKGERLPVDPAELVSMNFWLFSPSFIELTEDHFIDFLKEHGQEPKSECFIPTV CEEECCCCCCCCCCCCHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHH VDALIHADRADCAVLPTSSSWFGMTYPGDKPMVVEGINKLIQQGVYPEKLN HHHHHHCCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GSRYGGLKQLDPMGPNGEVVLDYSVYDAIRAGFGKVVFIIRRDFEDIFKEKVGSRFAGK CCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCE IEVDYAFQSLDDLPEGFSVPEGREKPWGTAHALRAARHVVKEPFAVVNADDFYGADAFVQ EEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCHHCCHHHHHH AAKFLTSTTDEPGKAHYGMIGYPLKNTLSDNGDVNRGICSIKGGLLDGVEEFVKIQADED HHHHHHCCCCCCCCCCCCEEECCHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHEECCCCC GVVRGNNLKGERLPVDPAELVSMNFWLFSPSFIELTEDHFIDFLKEHGQEPKSECFIPTV CEEECCCCCCCCCCCCHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHH VDALIHADRADCAVLPTSSSWFGMTYPGDKPMVVEGINKLIQQGVYPEKLN HHHHHHCCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA